RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 JPH1Q9HDC5 661 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-206ENST00000543881 TUBE1Q9UJT0 475 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 USP15Q9Y4E8 981 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-206ENST00000543881 MBLAC1A4D2B0 266 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-206ENST00000543881 hCG_1984214I3L0E3 225 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 MEIS1O00470 390 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 GFRA3O60609 400 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 GLP2RO95838 553 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 CD52P31358 61 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 SREBF1P36956 1147 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 SIGLEC14Q08ET2 396 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 GRIK4Q16099 956 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 PFKFB3Q16875 520 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-206ENST00000543881 PAN2Q504Q3 1202 aaKnown RBP13.52□□□□□ -0.25
GABPB1-206ENST00000543881 RTN4RL1Q86UN2 441 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-206ENST00000543881 TEX2Q8IWB9 1127 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 ZNF713Q8N859 430 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-206ENST00000543881 PHF7Q9BWX1 381 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-206ENST00000543881 AGXT2Q9BYV1 514 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 AGO4Q9HCK5 861 aaKnown RBP13.52□□□□□ -0.25
GABPB1-206ENST00000543881 FAM86C1Q9NVL1 165 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 SLC9A2Q9UBY0 812 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.25
GABPB1-206ENST00000543881 NID2Q14112 1375 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 SCG2P13521 617 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 ACTR2P61160 394 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 IGBP1P78318 339 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 FGD1P98174 961 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 AP3B2Q13367 1082 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 JAKMIP3Q5VZ66 844 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 BLOC1S2Q6QNY1 142 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 NPAS4Q8IUM7 802 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 CRYGNQ8WXF5 182 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 ASIC4Q96FT7 647 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 RPGRIP1Q96KN7 1286 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 NFASCO94856 1347 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 PLXNA4Q9HCM2 1894 aa13.51□□□□□ -0.25
GABPB1-206ENST00000543881 FAM86B1E9PN63 330 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 ATG7O95352 703 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 CCNE2O96020 404 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 FAM86B2P0C5J1 330 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 STAG3L1P0CL83 205 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 INSRRP14616 1297 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 VCPP55072 806 aaKnown RBP13.5□□□□□ -0.25
GABPB1-206ENST00000543881 MRPS6P82932 125 aaKnown RBP13.5□□□□□ -0.25
GABPB1-206ENST00000543881 PHKBQ93100 1093 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 FTHL17Q9BXU8 183 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 TLE6Q9H808 572 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 CFAP54Q96N23 3096 aa13.5□□□□□ -0.25
GABPB1-206ENST00000543881 LOXHD1Q8IVV2 1947 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 IGLV3-22A0A075B6J6 115 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
GABPB1-206ENST00000543881 AVPR2P30518 371 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 PLCB4Q15147 1175 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 NTRK3Q16288 839 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 IER5Q5VY09 327 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 MICAL1Q8TDZ2 1067 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 TRAPPC12Q8WVT3 735 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 ATOH1Q92858 354 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-206ENST00000543881 ZMYND12Q9H0C1 365 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 FAM49AQ9H0Q0 323 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-206ENST00000543881 IRF2BPLQ9H1B7 796 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 SQORQ9Y6N5 450 aa13.49□□□□□ -0.25
GABPB1-206ENST00000543881 IGKV6D-21A0A0A0MT36 114 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 ESYT2A0FGR8 921 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 PER2O15055 1255 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 DHX15O43143 795 aaKnown RBP13.48□□□□□ -0.25
GABPB1-206ENST00000543881 RPLP2P05387 115 aaKnown RBP13.48□□□□□ -0.25
GABPB1-206ENST00000543881 CYP3A4P08684 503 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 ATF7P17544 494 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-206ENST00000543881 GATMP50440 423 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 STAT5BP51692 787 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 RBM10P98175 930 aaKnown RBP13.48□□□□□ -0.25
GABPB1-206ENST00000543881 NIPA1Q7RTP0 329 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 PLPPR4Q7Z2D5 763 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 PLA2G4DQ86XP0 818 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 SUSD6Q92537 303 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 AZI2Q9H6S1 392 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 PADI3Q9ULW8 664 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 TRPV2Q9Y5S1 764 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 RRN3P2A6NIE6 340 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 M0QZ92 97 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 DDX39AO00148 427 aaKnown RBP13.48□□□□□ -0.25
GABPB1-206ENST00000543881 EDIL3O43854 480 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 REC8O95072 547 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 PDIA3P30101 505 aaKnown RBP13.48□□□□□ -0.25
GABPB1-206ENST00000543881 ZNF76P36508 570 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 EVCP57679 992 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 TMEM62Q0P6H9 643 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 TOB2Q14106 344 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-206ENST00000543881 PTPN21Q16825 1174 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 ABHD15Q6UXT9 468 aa13.48□□□□□ -0.25
GABPB1-206ENST00000543881 RASGRP4Q8TDF6 673 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms