RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B APE3P37302 537 aaKnown RBP0.1□□□□□ -2.39
snR39BsnR39B YBR056WP38081 501 aa0.1□□□□□ -2.39
snR39BsnR39B MED6P38782 295 aa0.1□□□□□ -2.39
snR39BsnR39B MET28P40573 187 aa0.1□□□□□ -2.39
snR39BsnR39B MRX6P48564 524 aa0.1□□□□□ -2.39
snR39BsnR39B VAC7P53950 1165 aa0.1□□□□□ -2.39
snR39BsnR39B YDR114CQ04597 100 aa0.1□□□□□ -2.39
snR39BsnR39B PEX30Q06169 523 aa0.1□□□□□ -2.39
snR39BsnR39B YLR177WQ06251 628 aa0.1□□□□□ -2.39
snR39BsnR39B TDH2P00358 332 aaKnown RBP0.09□□□□□ -2.4
snR39BsnR39B TDH3P00359 332 aaKnown RBP RIP-Chip data0.09□□□□□ -2.4not detected
snR39BsnR39B RSA4P25382 515 aaKnown RBP0.09□□□□□ -2.4
snR39BsnR39B SOR1P35497 357 aaKnown RBP0.09□□□□□ -2.4
snR39BsnR39B POP2P39008 433 aa0.09□□□□□ -2.4
snR39BsnR39B YEL057CP39983 233 aa0.09□□□□□ -2.4
snR39BsnR39B RNH201P53942 307 aa0.09□□□□□ -2.4
snR39BsnR39B PRP38Q00723 242 aaPredicted RBP0.09□□□□□ -2.4
snR39BsnR39B GMC1Q04399 608 aa0.09□□□□□ -2.4
snR39BsnR39B MYO5Q04439 1219 aaKnown RBP0.09□□□□□ -2.4
snR39BsnR39B APC4Q04601 652 aa0.09□□□□□ -2.4
snR39BsnR39B SOR2Q07786 357 aa0.09□□□□□ -2.4
snR39BsnR39B HSP42Q12329 375 aa0.09□□□□□ -2.4
snR39BsnR39B YCR024C-BQ3E7Z8 88 aa0.09□□□□□ -2.4
snR39BsnR39B YAL067W-AQ8TGK6 75 aa0.09□□□□□ -2.4
snR39BsnR39B MET2P08465 486 aa0.08□□□□□ -2.4
snR39BsnR39B CBS1P14066 229 aa0.08□□□□□ -2.4
snR39BsnR39B CPT1P17898 393 aa0.08□□□□□ -2.4
snR39BsnR39B COX10P21592 462 aa0.08□□□□□ -2.4
snR39BsnR39B LDS1P31379 325 aa0.08□□□□□ -2.4
snR39BsnR39B PMT1P33775 817 aa0.08□□□□□ -2.4
snR39BsnR39B CST26P38226 397 aa0.08□□□□□ -2.4
snR39BsnR39B MMS4P38257 691 aa0.08□□□□□ -2.4
snR39BsnR39B YFR054CP43622 192 aa0.08□□□□□ -2.4
snR39BsnR39B TWF1P53250 332 aa0.08□□□□□ -2.4
snR39BsnR39B RMI1Q02685 241 aa0.08□□□□□ -2.4
snR39BsnR39B YPL080CQ02826 108 aa0.08□□□□□ -2.4
snR39BsnR39B MSC3Q05812 728 aa0.08□□□□□ -2.4
snR39BsnR39B RCN2Q12044 265 aa0.08□□□□□ -2.4
snR39BsnR39B YPR063CQ12160 140 aa0.08□□□□□ -2.4
snR39BsnR39B SFM1Q12314 213 aa0.08□□□□□ -2.4
snR39BsnR39B FOB1O13329 566 aa0.07□□□□□ -2.4
snR39BsnR39B IMA3P0CW40 589 aa0.07□□□□□ -2.4
snR39BsnR39B IMA4P0CW41 589 aa0.07□□□□□ -2.4
snR39BsnR39B MET8P15807 274 aa0.07□□□□□ -2.4
snR39BsnR39B YEL043WP32618 956 aa0.07□□□□□ -2.4
snR39BsnR39B YBR241CP38142 488 aa0.07□□□□□ -2.4
snR39BsnR39B SMC2P38989 1170 aaKnown RBP0.07□□□□□ -2.4
snR39BsnR39B BDH1P39714 382 aa0.07□□□□□ -2.4
snR39BsnR39B DOT5P40553 215 aa0.07□□□□□ -2.4
snR39BsnR39B PHO86P46956 311 aa0.07□□□□□ -2.4
snR39BsnR39B CTK3P46963 296 aaPredicted RBP0.07□□□□□ -2.4
snR39BsnR39B RRP46P53256 223 aaPredicted RBP0.07□□□□□ -2.4
snR39BsnR39B SED5Q01590 340 aa0.07□□□□□ -2.4
snR39BsnR39B YML131WQ03102 365 aa0.07□□□□□ -2.4
snR39BsnR39B YMR010WQ03687 405 aa0.07□□□□□ -2.4
snR39BsnR39B URH1Q04179 340 aa0.07□□□□□ -2.4
snR39BsnR39B YMR018WQ04364 514 aa0.07□□□□□ -2.4
snR39BsnR39B CSI1Q04368 295 aa0.07□□□□□ -2.4
snR39BsnR39B GTO3Q04806 366 aa0.07□□□□□ -2.4
snR39BsnR39B IMA2Q08295 589 aa0.07□□□□□ -2.4
snR39BsnR39B RKM1Q08961 583 aaPredicted RBP0.07□□□□□ -2.4
snR39BsnR39B YDL211CQ12121 372 aa0.07□□□□□ -2.4
snR39BsnR39B ATG34Q12292 412 aa0.07□□□□□ -2.4
snR39BsnR39B SSC1P0CS90 654 aaKnown RBP0.06□□□□□ -2.4
snR39BsnR39B KRE1P17260 313 aa0.06□□□□□ -2.4
snR39BsnR39B DAL81P21657 970 aa0.06□□□□□ -2.4
snR39BsnR39B PPH22P23595 377 aa0.06□□□□□ -2.4
snR39BsnR39B CLB1P24868 471 aa0.06□□□□□ -2.4
snR39BsnR39B CHA1P25379 360 aaKnown RBP0.06□□□□□ -2.4
snR39BsnR39B KRE2P27809 442 aa0.06□□□□□ -2.4
snR39BsnR39B ANP1P32629 500 aa0.06□□□□□ -2.4
snR39BsnR39B TOM20P35180 183 aa0.06□□□□□ -2.4
snR39BsnR39B COS9P36034 407 aa0.06□□□□□ -2.4
snR39BsnR39B MUD2P36084 527 aaKnown RBP0.06□□□□□ -2.4
snR39BsnR39B SHE1P38200 338 aa0.06□□□□□ -2.4
snR39BsnR39B PRM1P53835 661 aa0.06□□□□□ -2.4
snR39BsnR39B SMD1Q02260 146 aaPredicted RBP0.06□□□□□ -2.4
snR39BsnR39B UBX2Q04228 584 aa0.06□□□□□ -2.4
snR39BsnR39B BUG1Q12191 341 aa0.06□□□□□ -2.4
snR39BsnR39B NCA2Q12374 616 aa0.06□□□□□ -2.4
snR39BsnR39B TFC7Q12415 435 aa0.06□□□□□ -2.4
snR39BsnR39B PCL9Q12477 304 aa0.06□□□□□ -2.4
snR39BsnR39B FLO11P08640 1367 aa0.06□□□□□ -2.4
snR39BsnR39B RPS18AP0CX55 146 aaKnown RBP0.05□□□□□ -2.4
snR39BsnR39B RPS18BP0CX56 146 aaPredicted RBP0.05□□□□□ -2.4
snR39BsnR39B CTA1P15202 515 aa0.05□□□□□ -2.4
snR39BsnR39B RHB1P25378 209 aa0.05□□□□□ -2.4
snR39BsnR39B HXT3P32466 567 aaKnown RBP0.05□□□□□ -2.4
snR39BsnR39B NIP1P32497 812 aaKnown RBP0.05□□□□□ -2.4
snR39BsnR39B CMC1P36064 111 aa0.05□□□□□ -2.4
snR39BsnR39B NOP4P37838 685 aaKnown RBP0.05□□□□□ -2.4
snR39BsnR39B ECM8P38246 354 aa0.05□□□□□ -2.4
snR39BsnR39B GEP4P38812 185 aa0.05□□□□□ -2.4
snR39BsnR39B TOS3P43637 560 aa0.05□□□□□ -2.4
snR39BsnR39B RPS0BP46654 252 aaKnown RBP0.05□□□□□ -2.4
snR39BsnR39B ASN2P49090 572 aaKnown RBP0.05□□□□□ -2.4
snR39BsnR39B ROG1P53118 685 aa0.05□□□□□ -2.4
snR39BsnR39B CWC22P53333 577 aaKnown RBP0.05□□□□□ -2.4
snR39BsnR39B VPS75P53853 264 aa0.05□□□□□ -2.4
snR39BsnR39B REX2P54964 269 aaKnown RBP0.05□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms