RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W RNA14P25298 677 aaKnown RBP3.49□□□□□ -1.85
HSH49YOR319W SPS22P25380 463 aa3.49□□□□□ -1.85
HSH49YOR319W YEF1P32622 495 aa3.49□□□□□ -1.85
HSH49YOR319W TOA2P32774 122 aa3.49□□□□□ -1.85
HSH49YOR319W VPS45P38932 577 aa3.49□□□□□ -1.85
HSH49YOR319W ALP1P38971 573 aa3.49□□□□□ -1.85
HSH49YOR319W YJL070CP40361 888 aa3.49□□□□□ -1.85
HSH49YOR319W BCH1Q05029 724 aa3.49□□□□□ -1.85
HSH49YOR319W STE23Q06010 1027 aa3.49□□□□□ -1.85
HSH49YOR319W ARR1Q06596 294 aa3.49□□□□□ -1.85
HSH49YOR319W RAX1Q08760 435 aa3.49□□□□□ -1.85
HSH49YOR319W AYT1Q12226 474 aa3.49□□□□□ -1.85
HSH49YOR319W GLE1Q12315 538 aa3.49□□□□□ -1.85
HSH49YOR319W YOP1Q12402 180 aa3.49□□□□□ -1.85
HSH49YOR319W AIM45Q12480 344 aaKnown RBP3.49□□□□□ -1.85
HSH49YOR319W SET6Q12529 373 aa3.49□□□□□ -1.85
HSH49YOR319W FSH3Q99369 266 aa3.49□□□□□ -1.85
HSH49YOR319W POM152P39685 1337 aa3.48□□□□□ -1.85
HSH49YOR319W OM45P16547 393 aa3.48□□□□□ -1.85
HSH49YOR319W SLY1P22213 666 aa3.48□□□□□ -1.85
HSH49YOR319W MRPL8P22353 238 aa3.48□□□□□ -1.85
HSH49YOR319W YCL068CP25593 260 aa3.48□□□□□ -1.85
HSH49YOR319W SEC1P30619 724 aaKnown RBP3.48□□□□□ -1.85
HSH49YOR319W VAM7P32912 316 aa3.48□□□□□ -1.85
HSH49YOR319W RIB5P38145 238 aa3.48□□□□□ -1.85
HSH49YOR319W MIX23P38162 196 aa3.48□□□□□ -1.85
HSH49YOR319W YMR134WP40207 237 aa3.48□□□□□ -1.85
HSH49YOR319W SEC9P40357 651 aa3.48□□□□□ -1.85
HSH49YOR319W AIM20P40451 204 aa3.48□□□□□ -1.85
HSH49YOR319W RPR2P40571 144 aa3.48□□□□□ -1.85
HSH49YOR319W YHC3P47040 408 aa3.48□□□□□ -1.85
HSH49YOR319W RRN9P53437 365 aa3.48□□□□□ -1.85
HSH49YOR319W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
HSH49YOR319W CUR1Q06469 252 aa3.48□□□□□ -1.85
HSH49YOR319W SNX3Q08826 162 aaKnown RBP3.48□□□□□ -1.85
HSH49YOR319W DAP1Q12091 152 aa3.48□□□□□ -1.85
HSH49YOR319W SPO24Q3E752 67 aa3.48□□□□□ -1.85
HSH49YOR319W MNS1P32906 549 aa3.47□□□□□ -1.85
HSH49YOR319W PPQ1P32945 549 aa3.47□□□□□ -1.85
HSH49YOR319W MCR1P36060 302 aaKnown RBP3.47□□□□□ -1.85
HSH49YOR319W NAT2P37293 288 aa3.47□□□□□ -1.85
HSH49YOR319W CHK1P38147 527 aa3.47□□□□□ -1.85
HSH49YOR319W YBP1P38315 674 aa3.47□□□□□ -1.85
HSH49YOR319W END3P39013 349 aa3.47□□□□□ -1.85
HSH49YOR319W PRP39P39682 629 aaKnown RBP3.47□□□□□ -1.85
HSH49YOR319W RPH1P39956 796 aa3.47□□□□□ -1.85
HSH49YOR319W YFR016CP43597 1233 aaKnown RBP3.47□□□□□ -1.85
HSH49YOR319W YDL186WP48568 277 aa3.47□□□□□ -1.85
HSH49YOR319W SPR6Q01684 191 aa3.47□□□□□ -1.85
HSH49YOR319W CCE1Q03702 353 aa3.47□□□□□ -1.85
HSH49YOR319W AIM33Q04516 312 aa3.47□□□□□ -1.85
HSH49YOR319W YMR317WQ04893 1140 aa3.47□□□□□ -1.85
HSH49YOR319W RTT103Q05543 409 aa3.47□□□□□ -1.85
HSH49YOR319W YDR262WQ12331 272 aa3.47□□□□□ -1.85
HSH49YOR319W RGS2Q99188 309 aa3.47□□□□□ -1.85
HSH49YOR319W PHO2P07269 559 aa3.46□□□□□ -1.86
HSH49YOR319W GAL7P08431 366 aa3.46□□□□□ -1.86
HSH49YOR319W YLL053CP0CD98 152 aa3.46□□□□□ -1.86
HSH49YOR319W RPS16AP0CX51 143 aaKnown RBP3.46□□□□□ -1.86
HSH49YOR319W RPS16BP0CX52 143 aaKnown RBP3.46□□□□□ -1.86
HSH49YOR319W CAP2P13517 287 aa3.46□□□□□ -1.86
HSH49YOR319W SWC5P38326 303 aa3.46□□□□□ -1.86
HSH49YOR319W MTC6P38849 526 aa3.46□□□□□ -1.86
HSH49YOR319W MDM31P38880 579 aa3.46□□□□□ -1.86
HSH49YOR319W OST1P41543 476 aaKnown RBP3.46□□□□□ -1.86
HSH49YOR319W YMR111CQ04461 462 aaPredicted RBP3.46□□□□□ -1.86
HSH49YOR319W YTH1Q06102 208 aaPredicted RBP3.46□□□□□ -1.86
HSH49YOR319W NDE2Q07500 545 aa3.46□□□□□ -1.86
HSH49YOR319W YOL075CQ08234 1294 aa3.46□□□□□ -1.86
HSH49YOR319W MSS116P15424 664 aaKnown RBP3.45□□□□□ -1.86
HSH49YOR319W EXG1P23776 448 aaKnown RBP3.45□□□□□ -1.86
HSH49YOR319W MUD1P32605 298 aaKnown RBP3.45□□□□□ -1.86
HSH49YOR319W JLP2P40206 208 aa3.45□□□□□ -1.86
HSH49YOR319W AIP1P46680 615 aaKnown RBP3.45□□□□□ -1.86
HSH49YOR319W COS10P52924 374 aa3.45□□□□□ -1.86
HSH49YOR319W CAB5Q03941 241 aa3.45□□□□□ -1.86
HSH49YOR319W SMP3Q04174 516 aa3.45□□□□□ -1.86
HSH49YOR319W RRG8Q06109 277 aa3.45□□□□□ -1.86
HSH49YOR319W YLR413WQ06689 675 aa3.45□□□□□ -1.86
HSH49YOR319W THP3Q12049 470 aaKnown RBP3.45□□□□□ -1.86
HSH49YOR319W APC2Q12440 853 aa3.45□□□□□ -1.86
HSH49YOR319W SUP35P05453 685 aaKnown RBP3.44□□□□□ -1.86
HSH49YOR319W SSC1P0CS90 654 aaKnown RBP3.44□□□□□ -1.86
HSH49YOR319W CPR1P14832 162 aaKnown RBP3.44□□□□□ -1.86
HSH49YOR319W CKI1P20485 582 aa3.44□□□□□ -1.86
HSH49YOR319W SAR1P20606 190 aaKnown RBP3.44□□□□□ -1.86
HSH49YOR319W ATS1P31386 333 aa3.44□□□□□ -1.86
HSH49YOR319W MRP4P32902 394 aa3.44□□□□□ -1.86
HSH49YOR319W FMP46P36141 133 aaKnown RBP3.44□□□□□ -1.86
HSH49YOR319W YBR137WP38276 179 aa3.44□□□□□ -1.86
HSH49YOR319W RTC2P38279 296 aa3.44□□□□□ -1.86
HSH49YOR319W YHR131CP38835 850 aa3.44□□□□□ -1.86
HSH49YOR319W COX14P39103 70 aa3.44□□□□□ -1.86
HSH49YOR319W YJL213WP40896 331 aa3.44□□□□□ -1.86
HSH49YOR319W LOH1P47055 219 aa3.44□□□□□ -1.86
HSH49YOR319W RIB4P50861 169 aaPredicted RBP3.44□□□□□ -1.86
HSH49YOR319W RPN14P53196 417 aa3.44□□□□□ -1.86
HSH49YOR319W VOA1P53262 265 aa3.44□□□□□ -1.86
HSH49YOR319W SPO19Q03029 223 aa3.44□□□□□ -1.86
HSH49YOR319W MRPL35Q06678 367 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms