RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	TIS11	P47977	285 aa		2.58	□□□□□ -2
SKP2	YNL311C	BUD9	P53226	547 aa		2.58	□□□□□ -2
SKP2	YNL311C	PCP1	P53259	346 aa		2.58	□□□□□ -2
SKP2	YNL311C	RPL6A	Q02326	176 aa	Known RBP	2.58	□□□□□ -2
SKP2	YNL311C	UME1	Q03010	460 aa		2.58	□□□□□ -2
SKP2	YNL311C	SPO20	Q04359	397 aa		2.58	□□□□□ -2
SKP2	YNL311C	CDC123	Q05791	360 aa		2.58	□□□□□ -2
SKP2	YNL311C	UIP4	Q08926	304 aa		2.58	□□□□□ -2
SKP2	YNL311C	GET4	Q12125	312 aa		2.58	□□□□□ -2
SKP2	YNL311C	YPL245W	Q12179	454 aa	Known RBP	2.58	□□□□□ -2
SKP2	YNL311C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SKP2	YNL311C	THR1	P17423	357 aa	Known RBP	2.58	□□□□□ -2
SKP2	YNL311C	AAC3	P18238	307 aa		2.58	□□□□□ -2
SKP2	YNL311C	RPB4	P20433	221 aa	Predicted RBP	2.58	□□□□□ -2
SKP2	YNL311C	APA2	P22108	325 aa		2.58	□□□□□ -2
SKP2	YNL311C	EHD3	P28817	500 aa		2.58	□□□□□ -2
SKP2	YNL311C	SDH3	P33421	198 aa		2.58	□□□□□ -2
SKP2	YNL311C	VPS21	P36017	210 aa	Known RBP	2.58	□□□□□ -2
SKP2	YNL311C	MUP3	P38734	546 aa		2.58	□□□□□ -2
SKP2	YNL311C	YJL193W	P39542	402 aa		2.58	□□□□□ -2
SKP2	YNL311C	BDH2	P39713	417 aa		2.58	□□□□□ -2
SKP2	YNL311C	SHE4	P51534	789 aa		2.58	□□□□□ -2
SKP2	YNL311C	PPT1	P53043	513 aa		2.58	□□□□□ -2
SKP2	YNL311C	SKO1	Q02100	647 aa		2.58	□□□□□ -2
SKP2	YNL311C	MMT1	Q03218	510 aa		2.58	□□□□□ -2
SKP2	YNL311C	PNP1	Q05788	311 aa		2.58	□□□□□ -2
SKP2	YNL311C	YTH1	Q06102	208 aa	Predicted RBP	2.58	□□□□□ -2
SKP2	YNL311C	ARR1	Q06596	294 aa		2.58	□□□□□ -2
SKP2	YNL311C	CSI2	Q08054	341 aa		2.58	□□□□□ -2
SKP2	YNL311C	FMP40	Q08968	688 aa	Predicted RBP	2.58	□□□□□ -2
SKP2	YNL311C	SPE4	Q12455	300 aa		2.58	□□□□□ -2
SKP2	YNL311C	RHO1	P06780	209 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	RPC31	P17890	251 aa		2.57	□□□□□ -2
SKP2	YNL311C	ART10	P18634	518 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	RPB5	P20434	215 aa		2.57	□□□□□ -2
SKP2	YNL311C	MDH2	P22133	377 aa		2.57	□□□□□ -2
SKP2	YNL311C	TRX2	P22803	104 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	URA7	P28274	579 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	RIM1	P32445	135 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	VMA11	P32842	164 aa		2.57	□□□□□ -2
SKP2	YNL311C	RCK1	P38622	512 aa		2.57	□□□□□ -2
SKP2	YNL311C	PEX18	P38855	283 aa		2.57	□□□□□ -2
SKP2	YNL311C	YER121W	P40076	114 aa		2.57	□□□□□ -2
SKP2	YNL311C	MOB2	P43563	287 aa		2.57	□□□□□ -2
SKP2	YNL311C	TAX4	P47030	604 aa		2.57	□□□□□ -2
SKP2	YNL311C	YNL046W	P53956	172 aa		2.57	□□□□□ -2
SKP2	YNL311C	CRZ1	P53968	678 aa		2.57	□□□□□ -2
SKP2	YNL311C	SED1	Q01589	338 aa		2.57	□□□□□ -2
SKP2	YNL311C	YPL108W	Q02872	168 aa	Predicted RBP	2.57	□□□□□ -2
SKP2	YNL311C	VPS71	Q03433	280 aa		2.57	□□□□□ -2
SKP2	YNL311C	GOT1	Q03554	138 aa		2.57	□□□□□ -2
SKP2	YNL311C	BUD22	Q04347	519 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	ERP4	Q12450	207 aa		2.57	□□□□□ -2
SKP2	YNL311C	MHF1	Q3E835	90 aa		2.57	□□□□□ -2
SKP2	YNL311C	FSH3	Q99369	266 aa		2.57	□□□□□ -2
SKP2	YNL311C	YLR462W	O13556	202 aa		2.57	□□□□□ -2
SKP2	YNL311C	ATP2	P00830	511 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	RPL35A	P0CX84	120 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	RPL35B	P0CX85	120 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	COQ2	P32378	372 aa		2.57	□□□□□ -2
SKP2	YNL311C	MTC7	P32633	139 aa		2.57	□□□□□ -2
SKP2	YNL311C	CBP4	P37267	147 aa		2.57	□□□□□ -2
SKP2	YNL311C	YBR197C	P38306	217 aa		2.57	□□□□□ -2
SKP2	YNL311C	RCK2	P38623	610 aa		2.57	□□□□□ -2
SKP2	YNL311C	YHL049C	P38722	271 aa		2.57	□□□□□ -2
SKP2	YNL311C	RPP1	P38786	293 aa		2.57	□□□□□ -2
SKP2	YNL311C	POP1	P41812	875 aa		2.57	□□□□□ -2
SKP2	YNL311C	RPS12	P48589	143 aa	Known RBP	2.57	□□□□□ -2
SKP2	YNL311C	NCE101	Q02820	53 aa		2.57	□□□□□ -2
SKP2	YNL311C	GMC1	Q04399	608 aa		2.57	□□□□□ -2
SKP2	YNL311C	TAZ1	Q06510	381 aa		2.57	□□□□□ -2
SKP2	YNL311C	FDH1	Q08911	376 aa		2.57	□□□□□ -2
SKP2	YNL311C	DAS2	Q12084	232 aa		2.57	□□□□□ -2
SKP2	YNL311C	SLP1	Q12232	587 aa		2.57	□□□□□ -2
SKP2	YNL311C	SWM1	Q12379	170 aa		2.57	□□□□□ -2
SKP2	YNL311C	YBL111C	Q3E7Y5	667 aa		2.57	□□□□□ -2
SKP2	YNL311C	LSO1	Q3E827	93 aa		2.57	□□□□□ -2
SKP2	YNL311C	YCL012C	Q8J0M4	134 aa		2.57	□□□□□ -2
SKP2	YNL311C	SPO16	P17122	198 aa		2.56	□□□□□ -2
SKP2	YNL311C	UGA1	P17649	471 aa		2.56	□□□□□ -2
SKP2	YNL311C	MSN1	P22148	382 aa		2.56	□□□□□ -2
SKP2	YNL311C	MNN2	P38069	597 aa		2.56	□□□□□ -2
SKP2	YNL311C	MTC6	P38849	526 aa		2.56	□□□□□ -2
SKP2	YNL311C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
SKP2	YNL311C	PZF1	P39933	429 aa		2.56	□□□□□ -2
SKP2	YNL311C	SPO73	P40031	143 aa		2.56	□□□□□ -2
SKP2	YNL311C	SHO1	P40073	367 aa		2.56	□□□□□ -2
SKP2	YNL311C	YMR134W	P40207	237 aa		2.56	□□□□□ -2
SKP2	YNL311C	MET18	P40469	1032 aa		2.56	□□□□□ -2
SKP2	YNL311C	BIT61	P47041	543 aa		2.56	□□□□□ -2
SKP2	YNL311C	MDE1	P47095	244 aa		2.56	□□□□□ -2
SKP2	YNL311C	SIP18	P50263	79 aa		2.56	□□□□□ -2
SKP2	YNL311C	LSG1	P53145	640 aa	Known RBP	2.56	□□□□□ -2
SKP2	YNL311C	TPC1	P53257	314 aa		2.56	□□□□□ -2
SKP2	YNL311C	CIK1	Q01649	594 aa		2.56	□□□□□ -2
SKP2	YNL311C	YMR317W	Q04893	1140 aa		2.56	□□□□□ -2
SKP2	YNL311C	COQ11	Q05892	277 aa		2.56	□□□□□ -2
SKP2	YNL311C	RAD34	Q06665	692 aa		2.56	□□□□□ -2
SKP2	YNL311C	RSC58	Q07979	502 aa		2.56	□□□□□ -2
SKP2	YNL311C	SET6	Q12529	373 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms