RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W ENT2Q05785 613 aa3.65□□□□□ -1.83
USA1YML029W NDL1Q06568 189 aa3.65□□□□□ -1.83
USA1YML029W MRL1Q06815 381 aa3.65□□□□□ -1.83
USA1YML029W NBA1Q08229 501 aaKnown RBP3.65□□□□□ -1.83
USA1YML029W MMT2Q08970 484 aa3.65□□□□□ -1.83
USA1YML029W YOS9Q99220 542 aa3.65□□□□□ -1.83
USA1YML029W DAT1P13483 248 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W GLK1P17709 500 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W YCR006CP25350 157 aa3.64□□□□□ -1.83
USA1YML029W ARE1P25628 610 aa3.64□□□□□ -1.83
USA1YML029W APE2P32454 952 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W CDC12P32468 407 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W LOT5P34234 306 aa3.64□□□□□ -1.83
USA1YML029W RIB1P38066 345 aa3.64□□□□□ -1.83
USA1YML029W TSL1P38427 1098 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W TRR2P38816 342 aa3.64□□□□□ -1.83
USA1YML029W QDR2P40474 542 aa3.64□□□□□ -1.83
USA1YML029W HSV2P50079 448 aaPredicted RBP3.64□□□□□ -1.83
USA1YML029W ATP22P50273 684 aaPredicted RBP3.64□□□□□ -1.83
USA1YML029W YNL095CP53932 642 aa3.64□□□□□ -1.83
USA1YML029W HOT1Q03213 719 aa3.64□□□□□ -1.83
USA1YML029W RRP9Q06506 573 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W HDA2Q06629 674 aa3.64□□□□□ -1.83
USA1YML029W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
USA1YML029W TAF3Q12297 353 aa3.64□□□□□ -1.83
USA1YML029W YPR064WQ12492 139 aa3.64□□□□□ -1.83
USA1YML029W MDM12Q92328 271 aa3.64□□□□□ -1.83
USA1YML029W ALG7P07286 448 aa3.64□□□□□ -1.83
USA1YML029W AAC3P18238 307 aa3.64□□□□□ -1.83
USA1YML029W URA4P20051 364 aa3.64□□□□□ -1.83
USA1YML029W CMK2P22517 447 aa3.64□□□□□ -1.83
USA1YML029W APN1P22936 367 aa3.64□□□□□ -1.83
USA1YML029W RPS1BP23248 255 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W FAA1P30624 700 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W ASF2P32448 525 aaPredicted RBP3.64□□□□□ -1.83
USA1YML029W SNM1P40993 198 aa3.64□□□□□ -1.83
USA1YML029W PMT4P46971 762 aa3.64□□□□□ -1.83
USA1YML029W ALB1P47019 175 aaPredicted RBP3.64□□□□□ -1.83
USA1YML029W RRN5Q02983 363 aa3.64□□□□□ -1.83
USA1YML029W RQC1Q05468 723 aaKnown RBP3.64□□□□□ -1.83
USA1YML029W BMT6Q12291 365 aa3.64□□□□□ -1.83
USA1YML029W YPT1P01123 206 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W GPH1P06738 902 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W YAP1P19880 650 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W VPS33P20795 691 aa3.63□□□□□ -1.83
USA1YML029W MSB1P21339 1137 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W CWH43P25618 953 aa3.63□□□□□ -1.83
USA1YML029W PEX3P28795 441 aa3.63□□□□□ -1.83
USA1YML029W SNU114P36048 1008 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W LYS12P40495 371 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W ELP2P42935 788 aa3.63□□□□□ -1.83
USA1YML029W PEX25Q02969 394 aa3.63□□□□□ -1.83
USA1YML029W PEX12Q04370 399 aa3.63□□□□□ -1.83
USA1YML029W GPI11Q06636 219 aa3.63□□□□□ -1.83
USA1YML029W THP1Q08231 455 aa3.63□□□□□ -1.83
USA1YML029W HNT3Q08702 217 aa3.63□□□□□ -1.83
USA1YML029W GLE1Q12315 538 aa3.63□□□□□ -1.83
USA1YML029W YOR019WQ99248 730 aa3.63□□□□□ -1.83
USA1YML029W RAD7P06779 565 aa3.63□□□□□ -1.83
USA1YML029W THR1P17423 357 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W SBA1P28707 216 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W MLF3P32047 452 aa3.63□□□□□ -1.83
USA1YML029W PDR3P33200 976 aa3.63□□□□□ -1.83
USA1YML029W VPS51P36116 164 aa3.63□□□□□ -1.83
USA1YML029W STP2P38704 541 aa3.63□□□□□ -1.83
USA1YML029W RCY1P39531 840 aa3.63□□□□□ -1.83
USA1YML029W RBG1P39729 369 aa3.63□□□□□ -1.83
USA1YML029W GIP2P40036 548 aa3.63□□□□□ -1.83
USA1YML029W VHR1P40522 640 aa3.63□□□□□ -1.83
USA1YML029W YGR201CP42936 225 aa3.63□□□□□ -1.83
USA1YML029W AGP3P43548 558 aa3.63□□□□□ -1.83
USA1YML029W MDV1P47025 714 aa3.63□□□□□ -1.83
USA1YML029W PMT3P47190 753 aa3.63□□□□□ -1.83
USA1YML029W SPT20P50875 604 aa3.63□□□□□ -1.83
USA1YML029W ASI2P53895 289 aa3.63□□□□□ -1.83
USA1YML029W SKI8Q02793 397 aaPredicted RBP3.63□□□□□ -1.83
USA1YML029W DBP9Q06218 594 aaKnown RBP3.63□□□□□ -1.83
USA1YML029W PSY3Q12318 242 aa3.63□□□□□ -1.83
USA1YML029W APC2Q12440 853 aa3.63□□□□□ -1.83
USA1YML029W PFK27Q12471 397 aaPredicted RBP3.63□□□□□ -1.83
USA1YML029W YOL159C-AQ3E769 90 aa3.63□□□□□ -1.83
USA1YML029W MHF2Q3E829 80 aa3.63□□□□□ -1.83
USA1YML029W TOR2P32600 2474 aaKnown RBP3.62□□□□□ -1.83
USA1YML029W RPS31P05759 152 aaKnown RBP3.62□□□□□ -1.83
USA1YML029W ARP2P32381 391 aaKnown RBP3.62□□□□□ -1.83
USA1YML029W NRP1P32770 719 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
USA1YML029W HCS1P34243 683 aa3.62□□□□□ -1.83
USA1YML029W MTC2P34246 357 aa3.62□□□□□ -1.83
USA1YML029W YHR177WP38867 453 aa3.62□□□□□ -1.83
USA1YML029W SEC24P40482 926 aaKnown RBP3.62□□□□□ -1.83
USA1YML029W STE24P47154 453 aa3.62□□□□□ -1.83
USA1YML029W RMR1P53060 241 aa3.62□□□□□ -1.83
USA1YML029W SPR6Q01684 191 aa3.62□□□□□ -1.83
USA1YML029W MSC1Q03104 513 aa3.62□□□□□ -1.83
USA1YML029W SPO77Q06134 477 aa3.62□□□□□ -1.83
USA1YML029W YPS7Q06325 596 aa3.62□□□□□ -1.83
USA1YML029W ARR1Q06596 294 aa3.62□□□□□ -1.83
USA1YML029W YPL066WQ12194 479 aa3.62□□□□□ -1.83
USA1YML029W FRE7Q12333 620 aa3.62□□□□□ -1.83
USA1YML029W WTM1Q12363 437 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms