RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	HMX1	P32339	317 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	TOA1	P32773	286 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	MCR1	P36060	302 aa	Known RBP	4.9	□□□□□ -1.63
RSA3	YLR221C	TOS2	P50078	622 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	RRN9	P53437	365 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	RET3	P53600	189 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	HST1	P53685	503 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	YMR310C	Q04867	317 aa	Predicted RBP	4.9	□□□□□ -1.63
RSA3	YLR221C	RTT103	Q05543	409 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	PBA1	Q05778	276 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	SPH1	Q06160	661 aa		4.9	□□□□□ -1.63
RSA3	YLR221C	TRP1	P00912	224 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	MAS1	P10507	462 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	MRPL8	P22353	238 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	CPR3	P25719	182 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	EFB1	P32471	206 aa	Known RBP	4.89	□□□□□ -1.63
RSA3	YLR221C	TOA2	P32774	122 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	RPS0A	P32905	252 aa	Known RBP	4.89	□□□□□ -1.63
RSA3	YLR221C	SRB2	P34162	210 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	YBL059W	P34224	193 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	KRE9	P39005	276 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	LOT6	Q07923	191 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	YRM1	Q12340	786 aa		4.89	□□□□□ -1.63
RSA3	YLR221C	PHO2	P07269	559 aa		4.88	□□□□□ -1.63
RSA3	YLR221C	SSC1	P0CS90	654 aa	Known RBP	4.88	□□□□□ -1.63
RSA3	YLR221C	SPT15	P13393	240 aa	Known RBP	4.88	□□□□□ -1.63
RSA3	YLR221C	SAG1	P20840	650 aa		4.88	□□□□□ -1.63
RSA3	YLR221C	PHA2	P32452	334 aa		4.88	□□□□□ -1.63
RSA3	YLR221C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RSA3	YLR221C	YHR218W	P38899	603 aa		4.88	□□□□□ -1.63
RSA3	YLR221C	LYS12	P40495	371 aa	Known RBP	4.88	□□□□□ -1.63
RSA3	YLR221C	TRM112	P53738	135 aa	Predicted RBP	4.88	□□□□□ -1.63
RSA3	YLR221C	CWC25	P53854	179 aa	Known RBP	4.88	□□□□□ -1.63
RSA3	YLR221C	YPR078C	Q06813	372 aa		4.88	□□□□□ -1.63
RSA3	YLR221C	ERV2	Q12284	196 aa		4.88	□□□□□ -1.63
RSA3	YLR221C	ARO2	P28777	376 aa	Known RBP	4.87	□□□□□ -1.63
RSA3	YLR221C	SBE22	P38814	852 aa		4.87	□□□□□ -1.63
RSA3	YLR221C	NDT80	P38830	627 aa		4.87	□□□□□ -1.63
RSA3	YLR221C	PTH1	P38876	190 aa	Known RBP	4.87	□□□□□ -1.63
RSA3	YLR221C	MRM2	P53123	320 aa		4.87	□□□□□ -1.63
RSA3	YLR221C	MTM1	P53320	366 aa		4.87	□□□□□ -1.63
RSA3	YLR221C	MTQ1	P53944	314 aa		4.87	□□□□□ -1.63
RSA3	YLR221C	NUP116	Q02630	1113 aa		4.87	□□□□□ -1.63
RSA3	YLR221C	PRM6	Q04705	352 aa		4.87	□□□□□ -1.63
RSA3	YLR221C	GLE1	Q12315	538 aa		4.87	□□□□□ -1.63
RSA3	YLR221C	CYC3	P06182	269 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	MAS2	P11914	482 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	CLN3	P13365	580 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	DBR1	P24309	405 aa	Known RBP	4.86	□□□□□ -1.63
RSA3	YLR221C	DEG1	P31115	442 aa	Known RBP	4.86	□□□□□ -1.63
RSA3	YLR221C	KAR9	P32526	644 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	RAD5	P32849	1169 aa	Predicted RBP	4.86	□□□□□ -1.63
RSA3	YLR221C	MNS1	P32906	549 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	PTK1	P36002	662 aa	Predicted RBP	4.86	□□□□□ -1.63
RSA3	YLR221C	GEP4	P38812	185 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	LCP5	P40079	357 aa	Predicted RBP	4.86	□□□□□ -1.63
RSA3	YLR221C	SEC9	P40357	651 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	MAM33	P40513	266 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	SPG5	P42933	373 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	IMP4	P53941	290 aa	Known RBP	4.86	□□□□□ -1.63
RSA3	YLR221C	ELP3	Q02908	557 aa	Known RBP	4.86	□□□□□ -1.63
RSA3	YLR221C	RTC5	Q12108	567 aa	Known RBP	4.86	□□□□□ -1.63
RSA3	YLR221C	EAF3	Q12432	401 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	FSH3	Q99369	266 aa		4.86	□□□□□ -1.63
RSA3	YLR221C	PIS1	P06197	220 aa	Known RBP	4.85	□□□□□ -1.63
RSA3	YLR221C	POP5	P28005	173 aa		4.85	□□□□□ -1.63
RSA3	YLR221C	TIR2	P33890	251 aa		4.85	□□□□□ -1.63
RSA3	YLR221C	GPX2	P38143	162 aa		4.85	□□□□□ -1.63
RSA3	YLR221C	BOR1	P53838	576 aa		4.85	□□□□□ -1.63
RSA3	YLR221C	YMR102C	Q03177	834 aa		4.85	□□□□□ -1.63
RSA3	YLR221C	SMC5	Q08204	1093 aa		4.85	□□□□□ -1.63
RSA3	YLR221C	AHC1	Q12433	566 aa		4.85	□□□□□ -1.63
RSA3	YLR221C	HTZ1	Q12692	134 aa	Known RBP	4.85	□□□□□ -1.63
RSA3	YLR221C	MEX67	Q99257	599 aa	Known RBP	4.85	□□□□□ -1.63
RSA3	YLR221C	SUP35	P05453	685 aa	Known RBP	4.84	□□□□□ -1.63
RSA3	YLR221C	DPH5	P32469	300 aa	Predicted RBP	4.84	□□□□□ -1.63
RSA3	YLR221C	YBR139W	P38109	508 aa		4.84	□□□□□ -1.63
RSA3	YLR221C	YHR131C	P38835	850 aa		4.84	□□□□□ -1.63
RSA3	YLR221C	COS1	P53822	381 aa		4.84	□□□□□ -1.63
RSA3	YLR221C	AIM33	Q04516	312 aa		4.84	□□□□□ -1.63
RSA3	YLR221C	YOR387C	Q08910	206 aa		4.84	□□□□□ -1.63
RSA3	YLR221C	YOR012W	Q12351	137 aa		4.84	□□□□□ -1.63
RSA3	YLR221C	NAM2	P11325	894 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	GRR1	P24814	1151 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	DAL2	P25335	343 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	VAM7	P32912	316 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	SUR1	P33300	382 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	YHR122W	P38829	231 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	REE1	P40893	198 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	SEC27	P41811	889 aa	Known RBP	4.83	□□□□□ -1.64
RSA3	YLR221C	AIM24	P47127	394 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	PRO2	P54885	456 aa	Known RBP	4.83	□□□□□ -1.64
RSA3	YLR221C	SHS1	Q07657	551 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	YGK3	Q12222	375 aa	Predicted RBP	4.83	□□□□□ -1.64
RSA3	YLR221C	AIM45	Q12480	344 aa	Known RBP	4.83	□□□□□ -1.64
RSA3	YLR221C	YCR024C-B	Q3E7Z8	88 aa		4.83	□□□□□ -1.64
RSA3	YLR221C	CBS2	P14905	389 aa		4.82	□□□□□ -1.64
RSA3	YLR221C	HXT2	P23585	541 aa		4.82	□□□□□ -1.64
RSA3	YLR221C	LIN1	P38852	340 aa	Predicted RBP	4.82	□□□□□ -1.64
RSA3	YLR221C	PES4	P39684	611 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms