RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	MST27	P53176	234 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	RRN9	P53437	365 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	ADA2	Q02336	434 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	TDA1	Q03533	586 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	RTN1	Q04947	295 aa	Known RBP	2.73	□□□□□ -1.97
TPK3	YKL166C	NOP6	Q07623	225 aa	Known RBP	2.73	□□□□□ -1.97
TPK3	YKL166C	SMC5	Q08204	1093 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	EAF3	Q12432	401 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	ARF1	P11076	181 aa	Known RBP	2.72	□□□□□ -1.97
TPK3	YKL166C	PUP2	P32379	260 aa		2.72	□□□□□ -1.97
TPK3	YKL166C	NUP2	P32499	720 aa		2.72	□□□□□ -1.97
TPK3	YKL166C	TOA2	P32774	122 aa		2.72	□□□□□ -1.97
TPK3	YKL166C	UTP18	P40362	594 aa	Predicted RBP	2.72	□□□□□ -1.97
TPK3	YKL166C	ATM1	P40416	690 aa		2.72	□□□□□ -1.97
TPK3	YKL166C	ASN2	P49090	572 aa	Known RBP	2.72	□□□□□ -1.97
TPK3	YKL166C	RRP46	P53256	223 aa	Predicted RBP	2.72	□□□□□ -1.97
TPK3	YKL166C	RTT102	P53330	157 aa		2.72	□□□□□ -1.97
TPK3	YKL166C	IPK1	Q06667	281 aa		2.72	□□□□□ -1.97
TPK3	YKL166C	LOT6	Q07923	191 aa		2.72	□□□□□ -1.97
TPK3	YKL166C	SMF3	Q12078	473 aa	Predicted RBP	2.72	□□□□□ -1.97
TPK3	YKL166C	YOP1	Q12402	180 aa		2.72	□□□□□ -1.97
TPK3	YKL166C	HSP82	P02829	709 aa	Known RBP	2.71	□□□□□ -1.98
TPK3	YKL166C	TPK3	P05986	398 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	PIS1	P06197	220 aa	Known RBP	2.71	□□□□□ -1.98
TPK3	YKL166C	DOA1	P36037	715 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	MCR1	P36060	302 aa	Known RBP	2.71	□□□□□ -1.98
TPK3	YKL166C	GPX2	P38143	162 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	MNL1	P38888	796 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	PTI1	P39927	425 aa	Predicted RBP	2.71	□□□□□ -1.98
TPK3	YKL166C	MIG3	P39943	394 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	MAM33	P40513	266 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	HAC1	P41546	238 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	YFR057W	P43625	151 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	BNS1	P50084	137 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	YIP5	P53108	310 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	MLC1	P53141	149 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	ASA1	Q06822	443 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	CMS1	Q07897	291 aa	Known RBP	2.71	□□□□□ -1.98
TPK3	YKL166C	YCR024C-B	Q3E7Z8	88 aa		2.71	□□□□□ -1.98
TPK3	YKL166C	PRR1	P28708	518 aa		2.7	□□□□□ -1.98
TPK3	YKL166C	ANR2	P36090	516 aa	Predicted RBP	2.7	□□□□□ -1.98
TPK3	YKL166C	KAP104	P38217	918 aa	Known RBP	2.7	□□□□□ -1.98
TPK3	YKL166C	RTC2	P38279	296 aa		2.7	□□□□□ -1.98
TPK3	YKL166C	BIR1	P47134	954 aa		2.7	□□□□□ -1.98
TPK3	YKL166C	TSA2	Q04120	196 aa		2.7	□□□□□ -1.98
TPK3	YKL166C	PRM6	Q04705	352 aa		2.7	□□□□□ -1.98
TPK3	YKL166C	AAD15	Q08361	143 aa		2.7	□□□□□ -1.98
TPK3	YKL166C	SRN2	Q99176	213 aa		2.7	□□□□□ -1.98
TPK3	YKL166C	RNA1	P11745	407 aa	Known RBP	2.69	□□□□□ -1.98
TPK3	YKL166C	RAD5	P32849	1169 aa	Predicted RBP	2.69	□□□□□ -1.98
TPK3	YKL166C	RXT2	P38255	430 aa		2.69	□□□□□ -1.98
TPK3	YKL166C	SPP381	P38282	291 aa	Predicted RBP	2.69	□□□□□ -1.98
TPK3	YKL166C	YHR177W	P38867	453 aa		2.69	□□□□□ -1.98
TPK3	YKL166C	BAT1	P38891	393 aa	Known RBP	2.69	□□□□□ -1.98
TPK3	YKL166C	EGT2	P42835	1041 aa		2.69	□□□□□ -1.98
TPK3	YKL166C	ATG18	P43601	500 aa		2.69	□□□□□ -1.98
TPK3	YKL166C	ABM1	P47146	123 aa		2.69	□□□□□ -1.98
TPK3	YKL166C	CRH1	P53301	507 aa		2.69	□□□□□ -1.98
TPK3	YKL166C	RCF1	Q03713	159 aa		2.69	□□□□□ -1.98
TPK3	YKL166C	LDS2	Q08218	356 aa		2.69	□□□□□ -1.98
TPK3	YKL166C	SOD1	P00445	154 aa	Known RBP	2.68	□□□□□ -1.98
TPK3	YKL166C	NOP1	P15646	327 aa	Known RBP	2.68	□□□□□ -1.98
TPK3	YKL166C	AAT2	P23542	418 aa	Known RBP	2.68	□□□□□ -1.98
TPK3	YKL166C	PCL1	P24867	279 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	PRS1	P32895	427 aa	Known RBP	2.68	□□□□□ -1.98
TPK3	YKL166C	TIR2	P33890	251 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	SPT10	P35208	640 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	GEP4	P38812	185 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	OXA1	P39952	402 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	EPL1	P43572	832 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	CLD1	P53264	445 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	ALF1	P53904	254 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	HAL1	Q01766	294 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	ERO1	Q03103	563 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	YPR091C	Q06833	770 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	YDL114W	Q07530	308 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	YFH1	Q07540	174 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	MFG1	Q07684	458 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	FCY22	Q12119	530 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	SKS1	Q12505	502 aa		2.68	□□□□□ -1.98
TPK3	YKL166C	FUN26	P31381	517 aa		2.67	□□□□□ -1.98
TPK3	YKL166C	UTH1	P36135	365 aa		2.67	□□□□□ -1.98
TPK3	YKL166C	TRM112	P53738	135 aa	Predicted RBP	2.67	□□□□□ -1.98
TPK3	YKL166C	YET2	Q04210	160 aa		2.67	□□□□□ -1.98
TPK3	YKL166C	NAG1	Q8TGN9	163 aa		2.67	□□□□□ -1.98
TPK3	YKL166C	RPL6B	P05739	176 aa	Known RBP	2.66	□□□□□ -1.98
TPK3	YKL166C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
TPK3	YKL166C	DAP2	P18962	818 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	YSW1	P38280	609 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	OM14	P38325	134 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	WSS1	P38838	269 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	YER186C	P40101	306 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	DFG10	P40526	253 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	RPL6A	Q02326	176 aa	Known RBP	2.66	□□□□□ -1.98
TPK3	YKL166C	BSC6	Q08280	497 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	YDR061W	Q12298	539 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	YDL199C	Q12407	687 aa		2.66	□□□□□ -1.98
TPK3	YKL166C	HTZ1	Q12692	134 aa	Known RBP	2.66	□□□□□ -1.98
TPK3	YKL166C	SPO23	P33757	523 aa		2.65	□□□□□ -1.99
TPK3	YKL166C	GDT1	P38301	280 aa	Predicted RBP	2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms