RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C HEM15P16622 393 aa1.95□□□□□ -2.1
VPS35YJL154C ALG1P16661 449 aa1.95□□□□□ -2.1
VPS35YJL154C RRP7P25368 297 aaPredicted RBP1.95□□□□□ -2.1
VPS35YJL154C DEG1P31115 442 aaKnown RBP1.95□□□□□ -2.1
VPS35YJL154C IDP2P41939 412 aa1.95□□□□□ -2.1
VPS35YJL154C RRT5P43607 289 aa1.95□□□□□ -2.1
VPS35YJL154C COS10P52924 374 aa1.95□□□□□ -2.1
VPS35YJL154C YGR016WP53209 190 aa1.95□□□□□ -2.1
VPS35YJL154C RRP46P53256 223 aaPredicted RBP1.95□□□□□ -2.1
VPS35YJL154C ARK1P53974 638 aa1.95□□□□□ -2.1
VPS35YJL154C YMR181CQ03231 154 aa1.95□□□□□ -2.1
VPS35YJL154C RPN9Q04062 393 aaKnown RBP1.95□□□□□ -2.1
VPS35YJL154C IMA2Q08295 589 aa1.95□□□□□ -2.1
VPS35YJL154C HNT3Q08702 217 aa1.95□□□□□ -2.1
VPS35YJL154C FRE6Q12473 712 aa1.95□□□□□ -2.1
VPS35YJL154C STH1P32597 1359 aa1.94□□□□□ -2.1
VPS35YJL154C ILV5P06168 395 aaKnown RBP1.94□□□□□ -2.1
VPS35YJL154C NAM2P11325 894 aa1.94□□□□□ -2.1
VPS35YJL154C PHO84P25297 587 aaKnown RBP1.94□□□□□ -2.1
VPS35YJL154C YBL059WP34224 193 aa1.94□□□□□ -2.1
VPS35YJL154C DOA1P36037 715 aa1.94□□□□□ -2.1
VPS35YJL154C CAJ1P39101 391 aa1.94□□□□□ -2.1
VPS35YJL154C PAC11P40960 533 aa1.94□□□□□ -2.1
VPS35YJL154C VTI1Q04338 217 aa1.94□□□□□ -2.1
VPS35YJL154C TFB5Q3E7C1 72 aaPredicted RBP1.94□□□□□ -2.1
VPS35YJL154C SRN2Q99176 213 aa1.94□□□□□ -2.1
VPS35YJL154C ATP1P07251 545 aaKnown RBP1.94□□□□□ -2.1
VPS35YJL154C ARO3P14843 370 aaKnown RBP1.94□□□□□ -2.1
VPS35YJL154C CPR3P25719 182 aa1.94□□□□□ -2.1
VPS35YJL154C SDH3P33421 198 aa1.94□□□□□ -2.1
VPS35YJL154C PAD1P33751 242 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
VPS35YJL154C PTH1P38876 190 aaKnown RBP1.94□□□□□ -2.1
VPS35YJL154C SFH5P47008 294 aa1.94□□□□□ -2.1
VPS35YJL154C ASN2P49090 572 aaKnown RBP1.94□□□□□ -2.1
VPS35YJL154C ATP22P50273 684 aaPredicted RBP1.94□□□□□ -2.1
VPS35YJL154C NSE1Q07913 336 aa1.94□□□□□ -2.1
VPS35YJL154C SGT2Q12118 346 aaKnown RBP1.94□□□□□ -2.1
VPS35YJL154C TOR2P32600 2474 aaKnown RBP1.93□□□□□ -2.1
VPS35YJL154C TEL1P38110 2787 aa1.93□□□□□ -2.1
VPS35YJL154C CPR4P25334 318 aa1.93□□□□□ -2.1
VPS35YJL154C DPH2P32461 534 aa1.93□□□□□ -2.1
VPS35YJL154C SKN1P33336 771 aa1.93□□□□□ -2.1
VPS35YJL154C DAD2P36162 133 aa1.93□□□□□ -2.1
VPS35YJL154C CHK1P38147 527 aa1.93□□□□□ -2.1
VPS35YJL154C YIL067CP40514 678 aa1.93□□□□□ -2.1
VPS35YJL154C YIL029CP40538 142 aa1.93□□□□□ -2.1
VPS35YJL154C YIP5P53108 310 aa1.93□□□□□ -2.1
VPS35YJL154C PBA1Q05778 276 aa1.93□□□□□ -2.1
VPS35YJL154C NCA2Q12374 616 aa1.93□□□□□ -2.1
VPS35YJL154C YCL021W-AQ96VH3 125 aa1.93□□□□□ -2.1
VPS35YJL154C PHO2P07269 559 aa1.93□□□□□ -2.1
VPS35YJL154C CHS1P08004 1131 aa1.93□□□□□ -2.1
VPS35YJL154C NFT1P0CE68 1218 aa1.93□□□□□ -2.1
VPS35YJL154C NAT1P12945 854 aaKnown RBP1.93□□□□□ -2.1
VPS35YJL154C MRPL4P36517 319 aa1.93□□□□□ -2.1
VPS35YJL154C MIX23P38162 196 aa1.93□□□□□ -2.1
VPS35YJL154C RRF1P38771 230 aa1.93□□□□□ -2.1
VPS35YJL154C STN1P38960 494 aa1.93□□□□□ -2.1
VPS35YJL154C FAA2P39518 744 aa1.93□□□□□ -2.1
VPS35YJL154C ATM1P40416 690 aa1.93□□□□□ -2.1
VPS35YJL154C HER2Q03557 464 aa1.93□□□□□ -2.1
VPS35YJL154C URH1Q04179 340 aa1.93□□□□□ -2.1
VPS35YJL154C BCH1Q05029 724 aa1.93□□□□□ -2.1
VPS35YJL154C TSR1Q07381 788 aaKnown RBP1.93□□□□□ -2.1
VPS35YJL154C APC5Q08683 685 aa1.93□□□□□ -2.1
VPS35YJL154C SRL2Q12020 392 aa1.93□□□□□ -2.1
VPS35YJL154C SMF3Q12078 473 aaPredicted RBP1.93□□□□□ -2.1
VPS35YJL154C TPT1Q12272 230 aaKnown RBP1.93□□□□□ -2.1
VPS35YJL154C HTZ1Q12692 134 aaKnown RBP1.93□□□□□ -2.1
VPS35YJL154C YCL068CP25593 260 aa1.92□□□□□ -2.1
VPS35YJL154C GEX1P25596 615 aa1.92□□□□□ -2.1
VPS35YJL154C QDR3P38227 689 aa1.92□□□□□ -2.1
VPS35YJL154C COX14P39103 70 aa1.92□□□□□ -2.1
VPS35YJL154C MLC1P53141 149 aa1.92□□□□□ -2.1
VPS35YJL154C TOF1P53840 1238 aa1.92□□□□□ -2.1
VPS35YJL154C SPR6Q01684 191 aa1.92□□□□□ -2.1
VPS35YJL154C YPL107WQ02873 248 aa1.92□□□□□ -2.1
VPS35YJL154C YMR010WQ03687 405 aa1.92□□□□□ -2.1
VPS35YJL154C CCE1Q03702 353 aa1.92□□□□□ -2.1
VPS35YJL154C AAD15Q08361 143 aa1.92□□□□□ -2.1
VPS35YJL154C RMD5Q12508 421 aa1.92□□□□□ -2.1
VPS35YJL154C COX3P00420 269 aa1.92□□□□□ -2.1
VPS35YJL154C TPK3P05986 398 aa1.92□□□□□ -2.1
VPS35YJL154C YUR1P26725 428 aa1.92□□□□□ -2.1
VPS35YJL154C GPI16P38875 610 aa1.92□□□□□ -2.1
VPS35YJL154C PRM5P40476 318 aa1.92□□□□□ -2.1
VPS35YJL154C YPS6P40583 537 aa1.92□□□□□ -2.1
VPS35YJL154C TRM112P53738 135 aaPredicted RBP1.92□□□□□ -2.1
VPS35YJL154C YDR286CQ05530 114 aa1.92□□□□□ -2.1
VPS35YJL154C RTT103Q05543 409 aa1.92□□□□□ -2.1
VPS35YJL154C YPR172WQ06608 200 aa1.92□□□□□ -2.1
VPS35YJL154C YFH1Q07540 174 aa1.92□□□□□ -2.1
VPS35YJL154C NFI1Q12216 726 aa1.92□□□□□ -2.1
VPS35YJL154C YMR230W-AQ3E7B5 62 aa1.92□□□□□ -2.1
VPS35YJL154C PRP8P33334 2413 aaKnown RBP1.91□□□□□ -2.1
VPS35YJL154C ARF1P11076 181 aaKnown RBP1.91□□□□□ -2.1
VPS35YJL154C DAL2P25335 343 aa1.91□□□□□ -2.1
VPS35YJL154C LAS1P36146 502 aaPredicted RBP1.91□□□□□ -2.1
VPS35YJL154C CCT4P39078 528 aaKnown RBP1.91□□□□□ -2.1
VPS35YJL154C MAM33P40513 266 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms