RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT3	YIL038C	YJR149W	P47177	404 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	YGR015C	P53208	328 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	MPS1	P54199	764 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	YDR239C	Q03780	787 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	HOF1	Q05080	669 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	YMR034C	Q05131	434 aa	Predicted RBP	4.99	□□□□□ -1.61
NOT3	YIL038C	ATG17	Q06410	417 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	RRT8	Q08219	342 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	DAP1	Q12091	152 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	AHC1	Q12433	566 aa		4.99	□□□□□ -1.61
NOT3	YIL038C	HIS5	P07172	385 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	YCR099C	P25657	155 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	URA8	P38627	578 aa	Predicted RBP	4.98	□□□□□ -1.61
NOT3	YIL038C	RPP1	P38786	293 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	UBP7	P40453	1071 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	GAT1	P43574	510 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	TOM22	P49334	152 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	YNL095C	P53932	642 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	EFR3	Q03653	782 aa	Known RBP	4.98	□□□□□ -1.61
NOT3	YIL038C	ACL4	Q03771	387 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	VBA4	Q04602	768 aa	Known RBP	4.98	□□□□□ -1.61
NOT3	YIL038C	RNH1	Q04740	348 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	COS7	Q07788	383 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	IZH3	Q07959	543 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	YPL247C	Q12523	523 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	YLR302C	O13544	120 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	HXK2	P04807	486 aa	Known RBP	4.98	□□□□□ -1.61
NOT3	YIL038C	BCY1	P07278	416 aa	Known RBP	4.98	□□□□□ -1.61
NOT3	YIL038C	UGA1	P17649	471 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	SEC14	P24280	304 aa	Known RBP	4.98	□□□□□ -1.61
NOT3	YIL038C	PTM1	P32857	523 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	UME6	P39001	836 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	MAM33	P40513	266 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	CTK2	P46962	323 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	GTO1	P48239	356 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	AIF1	P52923	378 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	YNR014W	P53719	212 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	GOT1	Q03554	138 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	DPB4	Q04603	196 aa	Known RBP	4.98	□□□□□ -1.61
NOT3	YIL038C	SPC2	Q04969	178 aa		4.98	□□□□□ -1.61
NOT3	YIL038C	PEX2	P32800	271 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	SKG1	P36169	355 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	BMT2	P38278	337 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	GOS1	P38736	223 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	MLH1	P38920	769 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	YDR089W	P38966	869 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	GVP36	P40531	326 aa	Known RBP	4.97	□□□□□ -1.61
NOT3	YIL038C	SNL1	P40548	159 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	RHO3	Q00245	231 aa	Known RBP	4.97	□□□□□ -1.61
NOT3	YIL038C	ARG7	Q04728	441 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	RQC1	Q05468	723 aa	Known RBP	4.97	□□□□□ -1.61
NOT3	YIL038C	YLR346C	Q06139	101 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	RCN2	Q12044	265 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	PUS9	Q12069	462 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	JLP1	Q12358	412 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	COS2	P0CX12	379 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	COS3	P0CX13	379 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	GAL3	P13045	520 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	BEM1	P29366	551 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	AST1	P35183	429 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	VPS21	P36017	210 aa	Known RBP	4.97	□□□□□ -1.61
NOT3	YIL038C	COS4	P43542	379 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	BIR1	P47134	954 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	CIK1	Q01649	594 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	DBP9	Q06218	594 aa	Known RBP	4.97	□□□□□ -1.61
NOT3	YIL038C	PLB3	Q08108	686 aa		4.97	□□□□□ -1.61
NOT3	YIL038C	ATR1	P13090	542 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	FBA1	P14540	359 aa	Known RBP	4.96	□□□□□ -1.61
NOT3	YIL038C	NSP1	P14907	823 aa	Known RBP	4.96	□□□□□ -1.61
NOT3	YIL038C	POL30	P15873	258 aa	Known RBP	4.96	□□□□□ -1.61
NOT3	YIL038C	RIB7	P33312	244 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	PRP18	P33411	251 aa	Predicted RBP	4.96	□□□□□ -1.61
NOT3	YIL038C	DOA1	P36037	715 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	GMH1	P36125	273 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	PCL7	P40186	285 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	YIL077C	P40508	320 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	ERG10	P41338	398 aa	Known RBP	4.96	□□□□□ -1.61
NOT3	YIL038C	YPL113C	Q02961	396 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	ATG29	Q12092	213 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	YDR215C	Q12240	137 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	SFM1	Q12314	213 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	ISA2	Q12425	185 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	YJR112W-A	Q3E743	109 aa		4.96	□□□□□ -1.61
NOT3	YIL038C	GCD2	P12754	651 aa	Predicted RBP	4.96	□□□□□ -1.62
NOT3	YIL038C	AMD1	P15274	810 aa	Known RBP	4.96	□□□□□ -1.62
NOT3	YIL038C	CIN8	P27895	1000 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	ZIP1	P31111	875 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	RML2	P32611	393 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	SUR1	P33300	382 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	HCS1	P34243	683 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	YPT35	P38815	214 aa	Known RBP	4.96	□□□□□ -1.62
NOT3	YIL038C	PZF1	P39933	429 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	COG5	P53951	403 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	ASI1	P54074	624 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	SWP1	Q02795	286 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	ATG21	Q02887	496 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	ABZ2	Q03266	374 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	MLH3	Q12083	715 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	YLR049C	Q12110	428 aa		4.96	□□□□□ -1.62
NOT3	YIL038C	RLM1	Q12224	676 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms