RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C ASK1P35734 292 aa3.79□□□□□ -1.8
PXR1YGR280C ECM10P39987 644 aa3.79□□□□□ -1.8
PXR1YGR280C YFL012WP43580 148 aa3.79□□□□□ -1.8
PXR1YGR280C YHC3P47040 408 aa3.79□□□□□ -1.8
PXR1YGR280C DAM1P53267 343 aa3.79□□□□□ -1.8
PXR1YGR280C OGG1P53397 376 aaPredicted RBP3.79□□□□□ -1.8
PXR1YGR280C CRZ1P53968 678 aa3.79□□□□□ -1.8
PXR1YGR280C SKO1Q02100 647 aa3.79□□□□□ -1.8
PXR1YGR280C PRP3Q03338 469 aaPredicted RBP3.79□□□□□ -1.8
PXR1YGR280C RSN1Q03516 953 aa3.79□□□□□ -1.8
PXR1YGR280C GOT1Q03554 138 aa3.79□□□□□ -1.8
PXR1YGR280C MUS81Q04149 632 aaPredicted RBP3.79□□□□□ -1.8
PXR1YGR280C BUR2Q05949 395 aa3.79□□□□□ -1.8
PXR1YGR280C YTH1Q06102 208 aaPredicted RBP3.79□□□□□ -1.8
PXR1YGR280C COS7Q07788 383 aa3.79□□□□□ -1.8
PXR1YGR280C DBP10Q12389 995 aaKnown RBP3.79□□□□□ -1.8
PXR1YGR280C KCS1Q12494 1050 aa3.79□□□□□ -1.8
PXR1YGR280C GPH1P06738 902 aaKnown RBP3.78□□□□□ -1.8
PXR1YGR280C PET111P08468 800 aa3.78□□□□□ -1.8
PXR1YGR280C YER190C-BP0CX94 160 aa3.78□□□□□ -1.8
PXR1YGR280C YEL077W-AP0CX95 160 aa3.78□□□□□ -1.8
PXR1YGR280C YGR296C-BP0CX96 160 aa3.78□□□□□ -1.8
PXR1YGR280C YPL283W-BP0CX97 160 aa3.78□□□□□ -1.8
PXR1YGR280C YPR204C-AP0CX98 160 aa3.78□□□□□ -1.8
PXR1YGR280C YFL068WP0CX99 160 aa3.78□□□□□ -1.8
PXR1YGR280C YLL066W-AP0CY00 160 aa3.78□□□□□ -1.8
PXR1YGR280C YLL067W-AP0CY01 160 aa3.78□□□□□ -1.8
PXR1YGR280C CDC34P14682 295 aa3.78□□□□□ -1.8
PXR1YGR280C SYP1P25623 870 aaKnown RBP3.78□□□□□ -1.8
PXR1YGR280C ARE1P25628 610 aa3.78□□□□□ -1.8
PXR1YGR280C URA10P30402 227 aa3.78□□□□□ -1.8
PXR1YGR280C PRE2P30656 287 aaKnown RBP3.78□□□□□ -1.8
PXR1YGR280C VPS21P36017 210 aaKnown RBP3.78□□□□□ -1.8
PXR1YGR280C DOA1P36037 715 aa3.78□□□□□ -1.8
PXR1YGR280C MTC6P38849 526 aa3.78□□□□□ -1.8
PXR1YGR280C YJL193WP39542 402 aa3.78□□□□□ -1.8
PXR1YGR280C YRB1P41920 201 aaKnown RBP3.78□□□□□ -1.8
PXR1YGR280C MOB2P43563 287 aa3.78□□□□□ -1.8
PXR1YGR280C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
PXR1YGR280C TPC1P53257 314 aa3.78□□□□□ -1.8
PXR1YGR280C PCP1P53259 346 aa3.78□□□□□ -1.8
PXR1YGR280C LSC1P53598 329 aaKnown RBP3.78□□□□□ -1.8
PXR1YGR280C NHP10Q03435 203 aa3.78□□□□□ -1.8
PXR1YGR280C RAD34Q06665 692 aa3.78□□□□□ -1.8
PXR1YGR280C SWM1Q12379 170 aa3.78□□□□□ -1.8
PXR1YGR280C AVL9Q12500 764 aa3.78□□□□□ -1.8
PXR1YGR280C TY2A-LR1P0C2J4 438 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-FP0CX61 438 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-GR2P0CX62 438 aa3.77□□□□□ -1.81
PXR1YGR280C RPB4P20433 221 aaPredicted RBP3.77□□□□□ -1.81
PXR1YGR280C KGD1P20967 1014 aaKnown RBP3.77□□□□□ -1.81
PXR1YGR280C ROX1P25042 368 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-CP25383 438 aa3.77□□□□□ -1.81
PXR1YGR280C VMA11P32842 164 aa3.77□□□□□ -1.81
PXR1YGR280C PRY2P36110 329 aa3.77□□□□□ -1.81
PXR1YGR280C LNP1P38878 278 aa3.77□□□□□ -1.81
PXR1YGR280C FLO5P38894 1075 aa3.77□□□□□ -1.81
PXR1YGR280C PZF1P39933 429 aa3.77□□□□□ -1.81
PXR1YGR280C RTA1P53047 317 aa3.77□□□□□ -1.81
PXR1YGR280C SED1Q01589 338 aa3.77□□□□□ -1.81
PXR1YGR280C GIP3Q03016 1276 aa3.77□□□□□ -1.81
PXR1YGR280C MSC1Q03104 513 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-DR2Q03483 438 aa3.77□□□□□ -1.81
PXR1YGR280C COQ11Q05892 277 aa3.77□□□□□ -1.81
PXR1YGR280C NDL1Q06568 189 aa3.77□□□□□ -1.81
PXR1YGR280C UBX3Q12229 455 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-BQ12260 438 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-OR2Q12293 438 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-DR1Q12392 438 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-OR1Q12439 438 aa3.77□□□□□ -1.81
PXR1YGR280C TY2A-DR3Q99303 438 aa3.77□□□□□ -1.81
PXR1YGR280C YLR462WO13556 202 aa3.76□□□□□ -1.81
PXR1YGR280C ART10P18634 518 aaKnown RBP3.76□□□□□ -1.81
PXR1YGR280C UTR1P21373 530 aa3.76□□□□□ -1.81
PXR1YGR280C MIG1P27705 504 aa3.76□□□□□ -1.81
PXR1YGR280C CBF5P33322 483 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
PXR1YGR280C YNK1P36010 153 aaKnown RBP3.76□□□□□ -1.81
PXR1YGR280C ECM8P38246 354 aa3.76□□□□□ -1.81
PXR1YGR280C YHL049CP38722 271 aa3.76□□□□□ -1.81
PXR1YGR280C PTC7P38797 343 aa3.76□□□□□ -1.81
PXR1YGR280C MNN1P39106 762 aa3.76□□□□□ -1.81
PXR1YGR280C SPO73P40031 143 aa3.76□□□□□ -1.81
PXR1YGR280C MET18P40469 1032 aa3.76□□□□□ -1.81
PXR1YGR280C NIT2P47016 307 aa3.76□□□□□ -1.81
PXR1YGR280C YNL140CP53910 189 aa3.76□□□□□ -1.81
PXR1YGR280C RAD30Q04049 632 aa3.76□□□□□ -1.81
PXR1YGR280C RRB1Q04225 511 aaKnown RBP3.76□□□□□ -1.81
PXR1YGR280C SMA2Q04658 369 aa3.76□□□□□ -1.81
PXR1YGR280C TMA46Q12000 345 aaKnown RBP3.76□□□□□ -1.81
PXR1YGR280C YBL111CQ3E7Y5 667 aa3.76□□□□□ -1.81
PXR1YGR280C RPS17AP02407 136 aaKnown RBP3.75□□□□□ -1.81
PXR1YGR280C ADE5,7P07244 802 aaKnown RBP3.75□□□□□ -1.81
PXR1YGR280C IMA3P0CW40 589 aa3.75□□□□□ -1.81
PXR1YGR280C IMA4P0CW41 589 aa3.75□□□□□ -1.81
PXR1YGR280C RPS17BP14127 136 aaKnown RBP3.75□□□□□ -1.81
PXR1YGR280C SPO12P17123 173 aa3.75□□□□□ -1.81
PXR1YGR280C PTM1P32857 523 aa3.75□□□□□ -1.81
PXR1YGR280C HCS1P34243 683 aa3.75□□□□□ -1.81
PXR1YGR280C NUP120P35729 1037 aa3.75□□□□□ -1.81
PXR1YGR280C MAD3P47074 515 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 85.4 ms