RNA–Protein interactions for RNA: YGR033C

TIM21, Transcript of Nonessential component of the TIM23 complex, yeast

Gene TIM21, Length 720 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM21	YGR033C	MSC3	Q05812	728 aa		4.25	□□□□□ -1.73
TIM21	YGR033C	YLR413W	Q06689	675 aa		4.25	□□□□□ -1.73
TIM21	YGR033C	RRP12	Q12754	1228 aa	Known RBP	4.25	□□□□□ -1.73
TIM21	YGR033C	TAD3	Q9URQ3	322 aa		4.25	□□□□□ -1.73
TIM21	YGR033C	RPL15A	P05748	204 aa	Known RBP	4.24	□□□□□ -1.73
TIM21	YGR033C	CPR1	P14832	162 aa	Known RBP	4.24	□□□□□ -1.73
TIM21	YGR033C	EFB1	P32471	206 aa	Known RBP	4.24	□□□□□ -1.73
TIM21	YGR033C	CHK1	P38147	527 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	SWC5	P38326	303 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	MTC6	P38849	526 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	FAA2	P39518	744 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	RPH1	P39956	796 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	RPR2	P40571	144 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	YFL067W	P43537	175 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	YFR016C	P43597	1233 aa	Known RBP	4.24	□□□□□ -1.73
TIM21	YGR033C	TRM112	P53738	135 aa	Predicted RBP	4.24	□□□□□ -1.73
TIM21	YGR033C	IBD2	P53892	351 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	CUR1	Q06469	252 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	NDE2	Q07500	545 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	RGT2	Q12300	763 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	AIM45	Q12480	344 aa	Known RBP	4.24	□□□□□ -1.73
TIM21	YGR033C	RGS2	Q99188	309 aa		4.24	□□□□□ -1.73
TIM21	YGR033C	MRPL8	P22353	238 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	SPS22	P25380	463 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	ATS1	P31386	333 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	YEF1	P32622	495 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	RTC2	P38279	296 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	VPS45	P38932	577 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	YJL070C	P40361	888 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	CAB5	Q03941	241 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	ERP1	Q05359	219 aa	Known RBP	4.23	□□□□□ -1.73
TIM21	YGR033C	HCR1	Q05775	265 aa	Known RBP	4.23	□□□□□ -1.73
TIM21	YGR033C	SRL1	Q08673	210 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	RAX1	Q08760	435 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	DAP1	Q12091	152 aa		4.23	□□□□□ -1.73
TIM21	YGR033C	MRPL23	Q12487	163 aa	Predicted RBP	4.23	□□□□□ -1.73
TIM21	YGR033C	CAP2	P13517	287 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	EXG1	P23776	448 aa	Known RBP	4.22	□□□□□ -1.73
TIM21	YGR033C	MUD1	P32605	298 aa	Known RBP	4.22	□□□□□ -1.73
TIM21	YGR033C	MCR1	P36060	302 aa	Known RBP	4.22	□□□□□ -1.73
TIM21	YGR033C	GEP4	P38812	185 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	YHR122W	P38829	231 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	WSC2	P53832	503 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	ALF1	P53904	254 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	BUR2	Q05949	395 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	STE23	Q06010	1027 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	YOL075C	Q08234	1294 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	APC5	Q08683	685 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	AHC1	Q12433	566 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	RRP36	Q12481	300 aa	Predicted RBP	4.22	□□□□□ -1.73
TIM21	YGR033C	YOR338W	Q99326	363 aa		4.22	□□□□□ -1.73
TIM21	YGR033C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	RIP-Chip
TIM21	YGR033C	MAS2	P11914	482 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	CKI1	P20485	582 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	CIN8	P27895	1000 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	MRP4	P32902	394 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TIM21	YGR033C	MIX23	P38162	196 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	YBP1	P38315	674 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	LCP5	P40079	357 aa	Predicted RBP	4.21	□□□□□ -1.74
TIM21	YGR033C	NCA3	P46955	337 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	PNC1	P53184	216 aa	Known RBP	4.21	□□□□□ -1.74
TIM21	YGR033C	VOA1	P53262	265 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	SHS1	Q07657	551 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	THP3	Q12049	470 aa	Known RBP	4.21	□□□□□ -1.74
TIM21	YGR033C	YDR262W	Q12331	272 aa		4.21	□□□□□ -1.74
TIM21	YGR033C	STE2	D6VTK4	431 aa		4.2	□□□□□ -1.74
TIM21	YGR033C	CDC23	P16522	626 aa		4.2	□□□□□ -1.74
TIM21	YGR033C	SEC1	P30619	724 aa	Known RBP	4.2	□□□□□ -1.74
TIM21	YGR033C	PRO3	P32263	286 aa	Known RBP	4.2	□□□□□ -1.74
TIM21	YGR033C	MDM31	P38880	579 aa		4.2	□□□□□ -1.74
TIM21	YGR033C	COX14	P39103	70 aa		4.2	□□□□□ -1.74
TIM21	YGR033C	WWM1	P43582	211 aa	Known RBP	4.2	□□□□□ -1.74
TIM21	YGR033C	AIP1	P46680	615 aa	Known RBP	4.2	□□□□□ -1.74
TIM21	YGR033C	RRN9	P53437	365 aa		4.2	□□□□□ -1.74
TIM21	YGR033C	GRS2	Q06817	618 aa		4.2	□□□□□ -1.74
TIM21	YGR033C	SSC1	P0CS90	654 aa	Known RBP	4.19	□□□□□ -1.74
TIM21	YGR033C	SAR1	P20606	190 aa	Known RBP	4.19	□□□□□ -1.74
TIM21	YGR033C	YPS1	P32329	569 aa		4.19	□□□□□ -1.74
TIM21	YGR033C	GPX2	P38143	162 aa		4.19	□□□□□ -1.74
TIM21	YGR033C	JLP2	P40206	208 aa		4.19	□□□□□ -1.74
TIM21	YGR033C	YJL213W	P40896	331 aa		4.19	□□□□□ -1.74
TIM21	YGR033C	HXT11	P54862	567 aa		4.19	□□□□□ -1.74
TIM21	YGR033C	TIP41	Q12199	356 aa		4.19	□□□□□ -1.74
TIM21	YGR033C	YLR108C	Q12259	485 aa		4.19	□□□□□ -1.74
TIM21	YGR033C	RPS16A	P0CX51	143 aa	Known RBP	4.18	□□□□□ -1.74
TIM21	YGR033C	RPS16B	P0CX52	143 aa	Known RBP	4.18	□□□□□ -1.74
TIM21	YGR033C	MCK1	P21965	375 aa	Known RBP	4.18	□□□□□ -1.74
TIM21	YGR033C	MXR2	P25566	168 aa		4.18	□□□□□ -1.74
TIM21	YGR033C	TOA2	P32774	122 aa		4.18	□□□□□ -1.74
TIM21	YGR033C	MYO3	P36006	1272 aa		4.18	□□□□□ -1.74
TIM21	YGR033C	YHK8	P38776	514 aa		4.18	□□□□□ -1.74
TIM21	YGR033C	YHR182W	P38870	785 aa		4.18	□□□□□ -1.74
TIM21	YGR033C	YIL029C	P40538	142 aa		4.18	□□□□□ -1.74
TIM21	YGR033C	SEC27	P41811	889 aa	Known RBP	4.18	□□□□□ -1.74
TIM21	YGR033C	RIB4	P50861	169 aa	Predicted RBP	4.18	□□□□□ -1.74
TIM21	YGR033C	DBP6	P53734	629 aa	Known RBP	4.18	□□□□□ -1.74
TIM21	YGR033C	CRZ1	P53968	678 aa		4.18	□□□□□ -1.74
TIM21	YGR033C	NAT4	Q04751	285 aa		4.18	□□□□□ -1.74
TIM21	YGR033C	YRM1	Q12340	786 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms