RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	MUD1	P32605	298 aa	Known RBP	4.57	□□□□□ -1.68
SKI8	YGL213C	MRPL40	P36534	297 aa		4.57	□□□□□ -1.68
SKI8	YGL213C	YBP1	P38315	674 aa		4.57	□□□□□ -1.68
SKI8	YGL213C	MDM31	P38880	579 aa		4.57	□□□□□ -1.68
SKI8	YGL213C	END3	P39013	349 aa		4.57	□□□□□ -1.68
SKI8	YGL213C	PRP39	P39682	629 aa	Known RBP	4.57	□□□□□ -1.68
SKI8	YGL213C	LSC1	P53598	329 aa	Known RBP	4.57	□□□□□ -1.68
SKI8	YGL213C	ERV25	P54837	211 aa	Known RBP	4.57	□□□□□ -1.68
SKI8	YGL213C	YLR297W	Q05899	129 aa		4.57	□□□□□ -1.68
SKI8	YGL213C	YPR078C	Q06813	372 aa		4.57	□□□□□ -1.68
SKI8	YGL213C	CAP2	P13517	287 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	MCK1	P21965	375 aa	Known RBP	4.56	□□□□□ -1.68
SKI8	YGL213C	EXG1	P23776	448 aa	Known RBP	4.56	□□□□□ -1.68
SKI8	YGL213C	PET18	P25362	215 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	PRO3	P32263	286 aa	Known RBP	4.56	□□□□□ -1.68
SKI8	YGL213C	EFB1	P32471	206 aa	Known RBP	4.56	□□□□□ -1.68
SKI8	YGL213C	YEF1	P32622	495 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	MNS1	P32906	549 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	YBR139W	P38109	508 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	YJL213W	P40896	331 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	HXT11	P54862	567 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	YML122C	Q03207	126 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	SMP3	Q04174	516 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	NDE2	Q07500	545 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	RAX1	Q08760	435 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	YIL002W-A	Q3E7Z5	69 aa		4.56	□□□□□ -1.68
SKI8	YGL213C	MAS2	P11914	482 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	MRPL8	P22353	238 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	RNA14	P25298	677 aa	Known RBP	4.55	□□□□□ -1.68
SKI8	YGL213C	MCR1	P36060	302 aa	Known RBP	4.55	□□□□□ -1.68
SKI8	YGL213C	YHR122W	P38829	231 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	MNN9	P39107	395 aa	Known RBP	4.55	□□□□□ -1.68
SKI8	YGL213C	SEC9	P40357	651 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	AIM20	P40451	204 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	COS10	P52924	374 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	TRM112	P53738	135 aa	Predicted RBP	4.55	□□□□□ -1.68
SKI8	YGL213C	CRZ1	P53968	678 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	TIP41	Q12199	356 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	AIM45	Q12480	344 aa	Known RBP	4.55	□□□□□ -1.68
SKI8	YGL213C	SPO24	Q3E752	67 aa		4.55	□□□□□ -1.68
SKI8	YGL213C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SKI8	YGL213C	GAL7	P08431	366 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	SSC1	P0CS90	654 aa	Known RBP	4.54	□□□□□ -1.68
SKI8	YGL213C	PUT4	P15380	627 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	DBP3	P20447	523 aa	Known RBP	4.54	□□□□□ -1.68
SKI8	YGL213C	TOA2	P32774	122 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	GEP4	P38812	185 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	LCP5	P40079	357 aa	Predicted RBP	4.54	□□□□□ -1.68
SKI8	YGL213C	JLP2	P40206	208 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	NCA3	P46955	337 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	RRN9	P53437	365 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	MSC3	Q05812	728 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	YLR108C	Q12259	485 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	AHC1	Q12433	566 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	APC2	Q12440	853 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	YOR338W	Q99326	363 aa		4.54	□□□□□ -1.68
SKI8	YGL213C	GDH1	P07262	454 aa	Known RBP	4.53	□□□□□ -1.68
SKI8	YGL213C	HEM15	P16622	393 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	CKI1	P20485	582 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	PPQ1	P32945	549 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	RIB7	P33312	244 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	EBP2	P36049	427 aa	Known RBP	4.53	□□□□□ -1.68
SKI8	YGL213C	YBR137W	P38276	179 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	RTC2	P38279	296 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	SWC5	P38326	303 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	WWM1	P43582	211 aa	Known RBP	4.53	□□□□□ -1.68
SKI8	YGL213C	STE23	Q06010	1027 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	CUR1	Q06469	252 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	MRPL35	Q06678	367 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	RGS2	Q99188	309 aa		4.53	□□□□□ -1.68
SKI8	YGL213C	OM45	P16547	393 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	GPX2	P38143	162 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	COX14	P39103	70 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	YDL186W	P48568	277 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	MSO1	P53604	210 aa	Known RBP	4.52	□□□□□ -1.69
SKI8	YGL213C	ALF1	P53904	254 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	EGD1	Q02642	157 aa	Known RBP	4.52	□□□□□ -1.69
SKI8	YGL213C	CAB5	Q03941	241 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	SHS1	Q07657	551 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	YOL075C	Q08234	1294 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	YRM1	Q12340	786 aa		4.52	□□□□□ -1.69
SKI8	YGL213C	RPS16A	P0CX51	143 aa	Known RBP	4.51	□□□□□ -1.69
SKI8	YGL213C	RPS16B	P0CX52	143 aa	Known RBP	4.51	□□□□□ -1.69
SKI8	YGL213C	TIR2	P33890	251 aa		4.51	□□□□□ -1.69
SKI8	YGL213C	YMR111C	Q04461	462 aa	Predicted RBP	4.51	□□□□□ -1.69
SKI8	YGL213C	YLR413W	Q06689	675 aa		4.51	□□□□□ -1.69
SKI8	YGL213C	APC5	Q08683	685 aa		4.51	□□□□□ -1.69
SKI8	YGL213C	YDR262W	Q12331	272 aa		4.51	□□□□□ -1.69
SKI8	YGL213C	CIN8	P27895	1000 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	AGA1	P32323	725 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	VAM7	P32912	316 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	YHK8	P38776	514 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	YIL029C	P40538	142 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	SEC27	P41811	889 aa	Known RBP	4.5	□□□□□ -1.69
SKI8	YGL213C	NUP116	Q02630	1113 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	BUR2	Q05949	395 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	MDM36	Q06820	579 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	HNT3	Q08702	217 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	PPT2	Q12036	173 aa		4.5	□□□□□ -1.69
SKI8	YGL213C	MXR2	P25566	168 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms