RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	APC5	Q08683	685 aa		2.41	□□□□□ -2.02
YMR31	YFR049W	YPR1	Q12458	312 aa		2.41	□□□□□ -2.02
YMR31	YFR049W	AIM45	Q12480	344 aa	Known RBP	2.41	□□□□□ -2.02
YMR31	YFR049W	DCP1	Q12517	231 aa	Predicted RBP	2.41	□□□□□ -2.02
YMR31	YFR049W	YNL162W-A	Q3E7A8	72 aa		2.41	□□□□□ -2.02
YMR31	YFR049W	POM152	P39685	1337 aa		2.41	□□□□□ -2.02
YMR31	YFR049W	SUP35	P05453	685 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	CAR2	P07991	424 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	MAS2	P11914	482 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	MTF1	P14908	341 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	MXR2	P25566	168 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	LOS1	P33418	1100 aa	Predicted RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	CUE2	P36075	443 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	MTC4	P38335	694 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	YMR262W	P38430	313 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	GEP4	P38812	185 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	PEX18	P38855	283 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	FAA2	P39518	744 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	ALG8	P40351	577 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	SEC9	P40357	651 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	YJL070C	P40361	888 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	DIM1	P41819	318 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	GCD14	P46959	383 aa	Predicted RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	MND1	P53102	219 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	YGR168C	P53293	376 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	GOR1	P53839	350 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	SPO19	Q03029	223 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	CSI1	Q04368	295 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	NAT4	Q04751	285 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	FMP42	Q04991	504 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	COQ11	Q05892	277 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	SNA4	Q07549	140 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	SHS1	Q07657	551 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	RRT8	Q08219	342 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	SNX3	Q08826	162 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	TPT1	Q12272	230 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	AHC1	Q12433	566 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	PAA1	Q12447	191 aa	Known RBP	2.4	□□□□□ -2.03
YMR31	YFR049W	CEX1	Q12453	761 aa		2.4	□□□□□ -2.03
YMR31	YFR049W	RPS16A	P0CX51	143 aa	Known RBP	2.39	□□□□□ -2.03
YMR31	YFR049W	RPS16B	P0CX52	143 aa	Known RBP	2.39	□□□□□ -2.03
YMR31	YFR049W	YFL068W	P0CX99	160 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	YLL066W-A	P0CY00	160 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	YLL067W-A	P0CY01	160 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	CAP2	P13517	287 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	MRPL8	P22353	238 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	EXG1	P23776	448 aa	Known RBP	2.39	□□□□□ -2.03
YMR31	YFR049W	YUR1	P26725	428 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	MYO3	P36006	1272 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	CHK1	P38147	527 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	BZZ1	P38822	633 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	FET3	P38993	636 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	LCP5	P40079	357 aa	Predicted RBP	2.39	□□□□□ -2.03
YMR31	YFR049W	YIL169C	P40442	995 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	SIM1	P40472	476 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	UTP25	P40498	721 aa	Known RBP	2.39	□□□□□ -2.03
YMR31	YFR049W	PCI8	P40512	444 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	AGX1	P43567	385 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	RRT5	P43607	289 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	SFH5	P47008	294 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	GTO1	P48239	356 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	SHE10	P53075	577 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	TRM112	P53738	135 aa	Predicted RBP	2.39	□□□□□ -2.03
YMR31	YFR049W	CAF40	P53829	373 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	ERV41	Q04651	352 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	RNH1	Q04740	348 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	BCH1	Q05029	724 aa		2.39	□□□□□ -2.03
YMR31	YFR049W	TDH1	P00360	332 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	SSA3	P09435	649 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	SSC1	P0CS90	654 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	RPL20A	P0CX23	172 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	RPL20B	P0CX24	172 aa	Predicted RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	UNG1	P12887	359 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	MEK1	P24719	497 aa	Predicted RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	CSM1	P25651	190 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	DEG1	P31115	442 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	VMA5	P31412	392 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	ZUO1	P32527	433 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	IME2	P32581	645 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	YEF1	P32622	495 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	COT1	P32798	439 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	MRPS5	P33759	307 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	RPC25	P35718	212 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	MCR1	P36060	302 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	PMU1	P36069	295 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	NAT2	P37293	288 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	IML3	P38265	245 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	ARC40	P38328	384 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	YHK8	P38776	514 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	MTC6	P38849	526 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	MET30	P39014	640 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	RBG1	P39729	369 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	BTT1	P40314	149 aa	Predicted RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	OST1	P41543	476 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	RTT101	P47050	842 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	YDL186W	P48568	277 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	YGR266W	P53326	701 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	SCW4	P53334	386 aa	Known RBP	2.38	□□□□□ -2.03
YMR31	YFR049W	RRN9	P53437	365 aa		2.38	□□□□□ -2.03
YMR31	YFR049W	YNL050C	P53952	270 aa		2.38	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms