RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W ATM1P40416 690 aa1.93□□□□□ -2.1
VPS52YDR484W YJL055WP47044 245 aa1.93□□□□□ -2.1
VPS52YDR484W STE24P47154 453 aa1.93□□□□□ -2.1
VPS52YDR484W ROG1P53118 685 aa1.93□□□□□ -2.1
VPS52YDR484W NDL1Q06568 189 aa1.93□□□□□ -2.1
VPS52YDR484W SMF3Q12078 473 aaPredicted RBP1.93□□□□□ -2.1
VPS52YDR484W RPN5Q12250 445 aaKnown RBP1.93□□□□□ -2.1
VPS52YDR484W ERP4Q12450 207 aa1.93□□□□□ -2.1
VPS52YDR484W ARF1P11076 181 aaKnown RBP1.92□□□□□ -2.1
VPS52YDR484W HSP26P15992 214 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
VPS52YDR484W YKL097CP34245 136 aa1.92□□□□□ -2.1
VPS52YDR484W SPT10P35208 640 aa1.92□□□□□ -2.1
VPS52YDR484W QDR3P38227 689 aa1.92□□□□□ -2.1
VPS52YDR484W LRP1P38801 184 aaKnown RBP1.92□□□□□ -2.1
VPS52YDR484W OXA1P39952 402 aa1.92□□□□□ -2.1
VPS52YDR484W TRM112P53738 135 aaPredicted RBP1.92□□□□□ -2.1
VPS52YDR484W TDA1Q03533 586 aa1.92□□□□□ -2.1
VPS52YDR484W TSA2Q04120 196 aa1.92□□□□□ -2.1
VPS52YDR484W LIP2Q06005 328 aa1.92□□□□□ -2.1
VPS52YDR484W RNH203Q12338 110 aa1.92□□□□□ -2.1
VPS52YDR484W AHC1Q12433 566 aa1.92□□□□□ -2.1
VPS52YDR484W TPK3P05986 398 aa1.91□□□□□ -2.1
VPS52YDR484W SSC1P0CS90 654 aaKnown RBP1.91□□□□□ -2.1
VPS52YDR484W RPL12AP0CX53 165 aaKnown RBP1.91□□□□□ -2.1
VPS52YDR484W RPL12BP0CX54 165 aa1.91□□□□□ -2.1
VPS52YDR484W MCR1P36060 302 aaKnown RBP1.91□□□□□ -2.1
VPS52YDR484W YNL208WP40159 199 aaKnown RBP1.91□□□□□ -2.1
VPS52YDR484W LCB2P40970 561 aa1.91□□□□□ -2.1
VPS52YDR484W CRH1P53301 507 aa1.91□□□□□ -2.1
VPS52YDR484W COS1P53822 381 aa1.91□□□□□ -2.1
VPS52YDR484W YOP1Q12402 180 aa1.91□□□□□ -2.1
VPS52YDR484W YCR024C-BQ3E7Z8 88 aa1.91□□□□□ -2.1
VPS52YDR484W RPL1AP0CX43 217 aaKnown RBP1.91□□□□□ -2.1
VPS52YDR484W RPL1BP0CX44 217 aaKnown RBP1.91□□□□□ -2.1
VPS52YDR484W MNE1P24720 663 aa1.91□□□□□ -2.1
VPS52YDR484W YSC83P32792 385 aa1.91□□□□□ -2.1
VPS52YDR484W KAP104P38217 918 aaKnown RBP1.91□□□□□ -2.1
VPS52YDR484W GDI1P39958 451 aaKnown RBP1.91□□□□□ -2.1
VPS52YDR484W EGT2P42835 1041 aa1.91□□□□□ -2.1
VPS52YDR484W ATG18P43601 500 aa1.91□□□□□ -2.1
VPS52YDR484W BNS1P50084 137 aa1.91□□□□□ -2.1
VPS52YDR484W RSC1P53236 928 aa1.91□□□□□ -2.1
VPS52YDR484W RTT102P53330 157 aa1.91□□□□□ -2.1
VPS52YDR484W YET2Q04210 160 aa1.91□□□□□ -2.1
VPS52YDR484W URC2Q04411 772 aa1.91□□□□□ -2.1
VPS52YDR484W ECM7Q06200 448 aa1.91□□□□□ -2.1
VPS52YDR484W YPR091CQ06833 770 aa1.91□□□□□ -2.1
VPS52YDR484W YDL114WQ07530 308 aa1.91□□□□□ -2.1
VPS52YDR484W AAD15Q08361 143 aa1.91□□□□□ -2.1
VPS52YDR484W OPI3P05375 206 aa1.9□□□□□ -2.11
VPS52YDR484W MID2P36027 376 aa1.9□□□□□ -2.11
VPS52YDR484W ANR2P36090 516 aaPredicted RBP1.9□□□□□ -2.11
VPS52YDR484W MRP21P38175 177 aa1.9□□□□□ -2.11
VPS52YDR484W AIP1P46680 615 aaKnown RBP1.9□□□□□ -2.11
VPS52YDR484W ASN2P49090 572 aaKnown RBP1.9□□□□□ -2.11
VPS52YDR484W PAR32Q12515 295 aaKnown RBP1.9□□□□□ -2.11
VPS52YDR484W NAG1Q8TGN9 163 aa1.9□□□□□ -2.11
VPS52YDR484W SRN2Q99176 213 aa1.9□□□□□ -2.11
VPS52YDR484W CDC50P25656 391 aa1.89□□□□□ -2.11
VPS52YDR484W MDL1P33310 695 aa1.89□□□□□ -2.11
VPS52YDR484W GPX2P38143 162 aa1.89□□□□□ -2.11
VPS52YDR484W ECM8P38246 354 aa1.89□□□□□ -2.11
VPS52YDR484W OM14P38325 134 aa1.89□□□□□ -2.11
VPS52YDR484W GEP4P38812 185 aa1.89□□□□□ -2.11
VPS52YDR484W PTI1P39927 425 aaPredicted RBP1.89□□□□□ -2.11
VPS52YDR484W MEH1Q02205 184 aa1.89□□□□□ -2.11
VPS52YDR484W ERO1Q03103 563 aa1.89□□□□□ -2.11
VPS52YDR484W FCY22Q12119 530 aa1.89□□□□□ -2.11
VPS52YDR484W PCL9Q12477 304 aa1.89□□□□□ -2.11
VPS52YDR484W MEX67Q99257 599 aaKnown RBP1.89□□□□□ -2.11
VPS52YDR484W IES6P32617 166 aa1.89□□□□□ -2.11
VPS52YDR484W PFF1P38244 976 aa1.89□□□□□ -2.11
VPS52YDR484W MNL1P38888 796 aa1.89□□□□□ -2.11
VPS52YDR484W BAT1P38891 393 aaKnown RBP1.89□□□□□ -2.11
VPS52YDR484W YER186CP40101 306 aa1.89□□□□□ -2.11
VPS52YDR484W EFM4P40516 257 aa1.89□□□□□ -2.11
VPS52YDR484W PMT5P52867 743 aa1.89□□□□□ -2.11
VPS52YDR484W RRN9P53437 365 aa1.89□□□□□ -2.11
VPS52YDR484W ASA1Q06822 443 aa1.89□□□□□ -2.11
VPS52YDR484W LDS2Q08218 356 aa1.89□□□□□ -2.11
VPS52YDR484W FUN26P31381 517 aa1.88□□□□□ -2.11
VPS52YDR484W TIR2P33890 251 aa1.88□□□□□ -2.11
VPS52YDR484W GPI18P38211 433 aa1.88□□□□□ -2.11
VPS52YDR484W GDT1P38301 280 aaPredicted RBP1.88□□□□□ -2.11
VPS52YDR484W MLH1P38920 769 aa1.88□□□□□ -2.11
VPS52YDR484W TOS2P50078 622 aa1.88□□□□□ -2.11
VPS52YDR484W MLC1P53141 149 aa1.88□□□□□ -2.11
VPS52YDR484W MKC7P53379 596 aa1.88□□□□□ -2.11
VPS52YDR484W SKI8Q02793 397 aaPredicted RBP1.88□□□□□ -2.11
VPS52YDR484W YMR010WQ03687 405 aa1.88□□□□□ -2.11
VPS52YDR484W IPK1Q06667 281 aa1.88□□□□□ -2.11
VPS52YDR484W MFG1Q07684 458 aa1.88□□□□□ -2.11
VPS52YDR484W HMS1Q12398 434 aa1.88□□□□□ -2.11
VPS52YDR484W PSK1P31374 1356 aa1.88□□□□□ -2.11
VPS52YDR484W COX4P04037 155 aa1.87□□□□□ -2.11
VPS52YDR484W DEP1P31385 405 aa1.87□□□□□ -2.11
VPS52YDR484W TOA2P32774 122 aa1.87□□□□□ -2.11
VPS52YDR484W JEM1P40358 645 aa1.87□□□□□ -2.11
VPS52YDR484W YDL199CQ12407 687 aa1.87□□□□□ -2.11
VPS52YDR484W RPL6BP05739 176 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms