RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	CET1	O13297	549 aa	Predicted RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	COX3	P00420	269 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	ADE5,7	P07244	802 aa	Known RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	RPS21A	P0C0V8	87 aa	Known RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-LR1	P0C2J4	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-F	P0CX61	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-GR2	P0CX62	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	CDC34	P14682	295 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	GIT1	P25346	518 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TRX3	P25372	127 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-C	P25383	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	NAM9	P27929	486 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	ERG9	P29704	444 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	ITR1	P30605	584 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	ARO7	P32178	256 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	PET309	P32522	965 aa	Predicted RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	PEP7	P32609	515 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	SKN1	P33336	771 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	LOT5	P34234	306 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	RMA1	P36001	430 aa	Known RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	SDS22	P36047	338 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	RSM22	P36056	628 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	RIB1	P38066	345 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	ARA1	P38115	344 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	POA1	P38218	177 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TRM7	P38238	310 aa	Known RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	YBR137W	P38276	179 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	NVJ1	P38881	321 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	SOP4	P39543	234 aa	Predicted RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	GDH3	P39708	457 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	ERV46	P39727	415 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	YEL073C	P39974	107 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	HEM14	P40012	539 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	SDP1	P40479	209 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	SER33	P40510	469 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	PTR3	P43606	678 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	PMT4	P46971	762 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	YJL049W	P47048	450 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	JHD2	P47156	728 aa	Predicted RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	DIE2	P50076	525 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	MUP1	P50276	574 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	BIO3	P50277	480 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	FLC3	P53121	802 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	SGF73	P53165	657 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	RRN9	P53437	365 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	COS1	P53822	381 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	IPI3	P53877	555 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	YSA1	Q01976	231 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	MRPL13	Q02204	264 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	GIP3	Q03016	1276 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-DR2	Q03483	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TDA1	Q03533	586 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	VHS1	Q03785	461 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	YMR087W	Q04299	284 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	YLR345W	Q06137	509 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	PDR8	Q06149	701 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	BSP1	Q06604	576 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	PUN1	Q06991	263 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	ATG10	Q07879	167 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TEN1	Q07921	160 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	MLH3	Q12083	715 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	RTC5	Q12108	567 aa	Known RBP	3.15	□□□□□ -1.91
PSF1	YDR013W	LCB4	Q12246	624 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-B	Q12260	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-OR2	Q12293	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-DR1	Q12392	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-OR1	Q12439	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TY2A-DR3	Q99303	438 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	TAD3	Q9URQ3	322 aa		3.15	□□□□□ -1.91
PSF1	YDR013W	MDM35	O60200	86 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	MET2	P08465	486 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
PSF1	YDR013W	KGD1	P20967	1014 aa	Known RBP	3.14	□□□□□ -1.91
PSF1	YDR013W	KIN3	P22209	435 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	APN1	P22936	367 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	RPS1B	P23248	255 aa	Known RBP	3.14	□□□□□ -1.91
PSF1	YDR013W	RHB1	P25378	209 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	RNP1	P32385	249 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	CDC12	P32468	407 aa	Known RBP	3.14	□□□□□ -1.91
PSF1	YDR013W	SFC1	P33303	322 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	TOD6	P34219	525 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	SNU114	P36048	1008 aa	Known RBP	3.14	□□□□□ -1.91
PSF1	YDR013W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
PSF1	YDR013W	ALY1	P36117	915 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	ASC1	P38011	319 aa	Known RBP	3.14	□□□□□ -1.91
PSF1	YDR013W	GPX2	P38143	162 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	YBR071W	P38243	211 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	IML3	P38265	245 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	YPT35	P38815	214 aa	Known RBP	3.14	□□□□□ -1.91
PSF1	YDR013W	MLH1	P38920	769 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	AIM2	P39721	246 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	YEL020C	P39994	560 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	FCY21	P40039	528 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	DOT6	P40059	670 aa	Known RBP	3.14	□□□□□ -1.91
PSF1	YDR013W	FAU1	P40099	211 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	NEO1	P40527	1151 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	ERG10	P41338	398 aa	Known RBP	3.14	□□□□□ -1.91
PSF1	YDR013W	AZF1	P41696	914 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	SSU1	P41930	458 aa		3.14	□□□□□ -1.91
PSF1	YDR013W	TIM54	P47045	478 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms