RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeast

Gene RRP42, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP42	YDL111C	PUT4	P15380	627 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	SAM2	P19358	384 aa	Known RBP	3.11	□□□□□ -1.91
RRP42	YDL111C	DBR1	P24309	405 aa	Known RBP	3.11	□□□□□ -1.91
RRP42	YDL111C	YCL068C	P25593	260 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	PPQ1	P32945	549 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	RIB5	P38145	238 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	MIX23	P38162	196 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	MTC4	P38335	694 aa	Known RBP	3.11	□□□□□ -1.91
RRP42	YDL111C	ALP1	P38971	573 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	YAT2	P40017	923 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	YJL070C	P40361	888 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	AZR1	P50080	613 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	RRN9	P53437	365 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	RTT103	Q05543	409 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	STE23	Q06010	1027 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	CUR1	Q06469	252 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	ARR1	Q06596	294 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	NDD1	Q08887	554 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	AYT1	Q12226	474 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	YDR262W	Q12331	272 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	YOP1	Q12402	180 aa		3.11	□□□□□ -1.91
RRP42	YDL111C	MSS116	P15424	664 aa	Known RBP	3.1	□□□□□ -1.91
RRP42	YDL111C	SLY1	P22213	666 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	RNA14	P25298	677 aa	Known RBP	3.1	□□□□□ -1.91
RRP42	YDL111C	SEC1	P30619	724 aa	Known RBP	3.1	□□□□□ -1.91
RRP42	YDL111C	MNS1	P32906	549 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	VAM7	P32912	316 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	YKL097C	P34245	136 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	MCR1	P36060	302 aa	Known RBP	3.1	□□□□□ -1.91
RRP42	YDL111C	YBP1	P38315	674 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	END3	P39013	349 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	PRP39	P39682	629 aa	Known RBP	3.1	□□□□□ -1.91
RRP42	YDL111C	SEC9	P40357	651 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	AIM20	P40451	204 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	RPR2	P40571	144 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	YFR016C	P43597	1233 aa	Known RBP	3.1	□□□□□ -1.91
RRP42	YDL111C	YHC3	P47040	408 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	TOS2	P50078	622 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	RPN14	P53196	417 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	SPR6	Q01684	191 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	YMR111C	Q04461	462 aa	Predicted RBP	3.1	□□□□□ -1.91
RRP42	YDL111C	NDE2	Q07500	545 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	YOL075C	Q08234	1294 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	SET6	Q12529	373 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	RGS2	Q99188	309 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	POM152	P39685	1337 aa		3.1	□□□□□ -1.91
RRP42	YDL111C	SUP35	P05453	685 aa	Known RBP	3.09	□□□□□ -1.91
RRP42	YDL111C	YLL053C	P0CD98	152 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	RPS16A	P0CX51	143 aa	Known RBP	3.09	□□□□□ -1.91
RRP42	YDL111C	RPS16B	P0CX52	143 aa	Known RBP	3.09	□□□□□ -1.91
RRP42	YDL111C	CHK1	P38147	527 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	SWC5	P38326	303 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	YHR131C	P38835	850 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	RPH1	P39956	796 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	SAD1	P43589	448 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	LOH1	P47055	219 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	YDL186W	P48568	277 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	COS10	P52924	374 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	CCE1	Q03702	353 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	CAB5	Q03941	241 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	AIM33	Q04516	312 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	YLR413W	Q06689	675 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	SNX3	Q08826	162 aa	Known RBP	3.09	□□□□□ -1.91
RRP42	YDL111C	DAP1	Q12091	152 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	APC2	Q12440	853 aa		3.09	□□□□□ -1.91
RRP42	YDL111C	GAL7	P08431	366 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	CAP2	P13517	287 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	CKI1	P20485	582 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	SAR1	P20606	190 aa	Known RBP	3.08	□□□□□ -1.92
RRP42	YDL111C	EXG1	P23776	448 aa	Known RBP	3.08	□□□□□ -1.92
RRP42	YDL111C	NAT2	P37293	288 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	RTC2	P38279	296 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	PEX32	P38292	413 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	MTC6	P38849	526 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	MDM31	P38880	579 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	JLP2	P40206	208 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	OST1	P41543	476 aa	Known RBP	3.08	□□□□□ -1.92
RRP42	YDL111C	VOA1	P53262	265 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	GRS2	Q06817	618 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	MDM36	Q06820	579 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	SPO24	Q3E752	67 aa		3.08	□□□□□ -1.92
RRP42	YDL111C	SSC1	P0CS90	654 aa	Known RBP	3.07	□□□□□ -1.92
RRP42	YDL111C	MUD1	P32605	298 aa	Known RBP	3.07	□□□□□ -1.92
RRP42	YDL111C	MRP4	P32902	394 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	COX14	P39103	70 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	CDC40	P40968	455 aa	Predicted RBP	3.07	□□□□□ -1.92
RRP42	YDL111C	RIB4	P50861	169 aa	Predicted RBP	3.07	□□□□□ -1.92
RRP42	YDL111C	MSO1	P53604	210 aa	Known RBP	3.07	□□□□□ -1.92
RRP42	YDL111C	DBP6	P53734	629 aa	Known RBP	3.07	□□□□□ -1.92
RRP42	YDL111C	HXT11	P54862	567 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	SPO19	Q03029	223 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	SMP3	Q04174	516 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	ECM18	Q04623	453 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	RRG8	Q06109	277 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	VAC14	Q06708	880 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	SHS1	Q07657	551 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	LOT6	Q07923	191 aa		3.07	□□□□□ -1.92
RRP42	YDL111C	THP3	Q12049	470 aa	Known RBP	3.07	□□□□□ -1.92
RRP42	YDL111C	DCP1	Q12517	231 aa	Predicted RBP	3.07	□□□□□ -1.92
RRP42	YDL111C	YOR338W	Q99326	363 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms