RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C ASP3-2P0CX77 362 aa1.97□□□□□ -2.09
ASM4YDL088C ASP3-3P0CX78 362 aa1.97□□□□□ -2.09
ASM4YDL088C ASP3-4P0CX79 362 aa1.97□□□□□ -2.09
ASM4YDL088C ASP3-1P0CZ17 362 aa1.97□□□□□ -2.09
ASM4YDL088C YCR051WP25631 222 aa1.97□□□□□ -2.09
ASM4YDL088C RPN12P32496 274 aa1.97□□□□□ -2.09
ASM4YDL088C IME2P32581 645 aa1.97□□□□□ -2.09
ASM4YDL088C NDE1P40215 560 aa1.97□□□□□ -2.09
ASM4YDL088C YPS6P40583 537 aa1.97□□□□□ -2.09
ASM4YDL088C GPD2P41911 440 aaKnown RBP1.97□□□□□ -2.09
ASM4YDL088C COS1P53822 381 aa1.97□□□□□ -2.09
ASM4YDL088C TAF11Q04226 346 aa1.97□□□□□ -2.09
ASM4YDL088C YDL114WQ07530 308 aa1.97□□□□□ -2.09
ASM4YDL088C MED2Q12124 431 aa1.97□□□□□ -2.09
ASM4YDL088C CHL4P38907 458 aa1.96□□□□□ -2.1
ASM4YDL088C GAT2P40209 560 aa1.96□□□□□ -2.1
ASM4YDL088C TRM112P53738 135 aaPredicted RBP1.96□□□□□ -2.1
ASM4YDL088C ENT5Q03769 411 aaKnown RBP1.96□□□□□ -2.1
ASM4YDL088C ACL4Q03771 387 aa1.96□□□□□ -2.1
ASM4YDL088C ROY1Q04847 553 aa1.96□□□□□ -2.1
ASM4YDL088C SFI1Q12369 946 aa1.96□□□□□ -2.1
ASM4YDL088C YDL199CQ12407 687 aa1.96□□□□□ -2.1
ASM4YDL088C AFI1Q99222 893 aa1.96□□□□□ -2.1
ASM4YDL088C SSC1P0CS90 654 aaKnown RBP1.95□□□□□ -2.1
ASM4YDL088C NIP1P32497 812 aaKnown RBP1.95□□□□□ -2.1
ASM4YDL088C SKN1P33336 771 aa1.95□□□□□ -2.1
ASM4YDL088C VHT1P53241 593 aa1.95□□□□□ -2.1
ASM4YDL088C YGR117CP53270 476 aa1.95□□□□□ -2.1
ASM4YDL088C DIA1P54005 336 aa1.95□□□□□ -2.1
ASM4YDL088C YDR061WQ12298 539 aa1.95□□□□□ -2.1
ASM4YDL088C MTR10Q99189 972 aa1.95□□□□□ -2.1
ASM4YDL088C COX3P00420 269 aa1.94□□□□□ -2.1
ASM4YDL088C GIT1P25346 518 aa1.94□□□□□ -2.1
ASM4YDL088C TIR4Q12218 487 aaPredicted RBP1.94□□□□□ -2.1
ASM4YDL088C PCL9Q12477 304 aa1.94□□□□□ -2.1
ASM4YDL088C TPI1P00942 248 aaKnown RBP1.93□□□□□ -2.1
ASM4YDL088C CDC21P06785 304 aa1.93□□□□□ -2.1
ASM4YDL088C ALG1P16661 449 aa1.93□□□□□ -2.1
ASM4YDL088C FUN26P31381 517 aa1.93□□□□□ -2.1
ASM4YDL088C HEL1P36113 551 aa1.93□□□□□ -2.1
ASM4YDL088C FRT2P39734 528 aa1.93□□□□□ -2.1
ASM4YDL088C SRB7P47822 140 aa1.93□□□□□ -2.1
ASM4YDL088C VEL1P53058 206 aa1.93□□□□□ -2.1
ASM4YDL088C YGR067CP53243 804 aa1.93□□□□□ -2.1
ASM4YDL088C YMR155WQ03795 547 aa1.93□□□□□ -2.1
ASM4YDL088C RPN9Q04062 393 aaKnown RBP1.93□□□□□ -2.1
ASM4YDL088C YDR115WQ04598 105 aa1.93□□□□□ -2.1
ASM4YDL088C YLR287CQ05881 355 aa1.93□□□□□ -2.1
ASM4YDL088C VPS54Q12071 889 aa1.93□□□□□ -2.1
ASM4YDL088C HMS1Q12398 434 aa1.93□□□□□ -2.1
ASM4YDL088C PAB1P04147 577 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
ASM4YDL088C PRY2P36110 329 aa1.93□□□□□ -2.1
ASM4YDL088C YMR010WQ03687 405 aa1.93□□□□□ -2.1
ASM4YDL088C PGA3Q12746 312 aaKnown RBP1.93□□□□□ -2.1
ASM4YDL088C PDC2P32896 925 aa1.92□□□□□ -2.1
ASM4YDL088C SKT5P34226 696 aa1.92□□□□□ -2.1
ASM4YDL088C MPE1P35728 441 aaKnown RBP1.92□□□□□ -2.1
ASM4YDL088C OLA1P38219 394 aaKnown RBP1.92□□□□□ -2.1
ASM4YDL088C ECM34P38728 170 aa1.92□□□□□ -2.1
ASM4YDL088C LSM12P38828 187 aaKnown RBP1.92□□□□□ -2.1
ASM4YDL088C GPI16P38875 610 aa1.92□□□□□ -2.1
ASM4YDL088C YIR035CP40579 254 aa1.92□□□□□ -2.1
ASM4YDL088C CAK1P43568 368 aaPredicted RBP1.92□□□□□ -2.1
ASM4YDL088C COQ5P49017 307 aa1.92□□□□□ -2.1
ASM4YDL088C RPT4P53549 437 aaKnown RBP1.92□□□□□ -2.1
ASM4YDL088C REX2P54964 269 aaKnown RBP1.92□□□□□ -2.1
ASM4YDL088C MDM1Q01846 1127 aa1.92□□□□□ -2.1
ASM4YDL088C PRP42Q03776 544 aaKnown RBP1.92□□□□□ -2.1
ASM4YDL088C YDR131CQ03899 556 aa1.92□□□□□ -2.1
ASM4YDL088C MMR1Q06324 491 aa1.92□□□□□ -2.1
ASM4YDL088C RUP1Q12242 671 aa1.92□□□□□ -2.1
ASM4YDL088C ISN1Q99312 450 aa1.92□□□□□ -2.1
ASM4YDL088C JNM1P36224 373 aa1.91□□□□□ -2.1
ASM4YDL088C ASC1P38011 319 aaKnown RBP1.91□□□□□ -2.1
ASM4YDL088C RCK2P38623 610 aa1.91□□□□□ -2.1
ASM4YDL088C TRF5P48561 642 aaKnown RBP1.91□□□□□ -2.1
ASM4YDL088C PIB2P53191 635 aa1.91□□□□□ -2.1
ASM4YDL088C YHC1Q05900 231 aaKnown RBP1.91□□□□□ -2.1
ASM4YDL088C ZIP1P31111 875 aa1.9□□□□□ -2.1
ASM4YDL088C SLM4P38247 162 aa1.9□□□□□ -2.1
ASM4YDL088C INM1P38710 295 aa1.9□□□□□ -2.1
ASM4YDL088C GEP4P38812 185 aa1.9□□□□□ -2.1
ASM4YDL088C ATM1P40416 690 aa1.9□□□□□ -2.1
ASM4YDL088C VHS2P40463 436 aa1.9□□□□□ -2.1
ASM4YDL088C BNI5P53890 448 aaKnown RBP1.9□□□□□ -2.1
ASM4YDL088C MSC3Q05812 728 aa1.9□□□□□ -2.1
ASM4YDL088C YLR177WQ06251 628 aa1.9□□□□□ -2.1
ASM4YDL088C TPK3P05986 398 aa1.89□□□□□ -2.11
ASM4YDL088C CDC31P06704 161 aaKnown RBP1.89□□□□□ -2.11
ASM4YDL088C ARO3P14843 370 aaKnown RBP1.89□□□□□ -2.11
ASM4YDL088C EPT1P22140 391 aa1.89□□□□□ -2.11
ASM4YDL088C SLM5P25345 492 aaKnown RBP1.89□□□□□ -2.11
ASM4YDL088C SPO23P33757 523 aa1.89□□□□□ -2.11
ASM4YDL088C MCR1P36060 302 aaKnown RBP1.89□□□□□ -2.11
ASM4YDL088C GPX2P38143 162 aa1.89□□□□□ -2.11
ASM4YDL088C FHL1P39521 936 aa1.89□□□□□ -2.11
ASM4YDL088C PRP38Q00723 242 aaPredicted RBP1.89□□□□□ -2.11
ASM4YDL088C SPC19Q03954 165 aa1.89□□□□□ -2.11
ASM4YDL088C SRO7Q12038 1033 aa1.89□□□□□ -2.11
ASM4YDL088C LDB17Q12342 491 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms