RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C UBP8P50102 471 aa3.71□□□□□ -1.82
PRP11YDL043C PYK2P52489 506 aaKnown RBP3.71□□□□□ -1.82
PRP11YDL043C RRN9P53437 365 aa3.71□□□□□ -1.82
PRP11YDL043C SLG1P54867 378 aa3.71□□□□□ -1.82
PRP11YDL043C YMR010WQ03687 405 aa3.71□□□□□ -1.82
PRP11YDL043C BNA7Q04066 261 aa3.71□□□□□ -1.82
PRP11YDL043C SWF1Q04629 336 aa3.71□□□□□ -1.82
PRP11YDL043C YLR173WQ06247 608 aa3.71□□□□□ -1.82
PRP11YDL043C TPO3Q06451 622 aa3.71□□□□□ -1.82
PRP11YDL043C YLL007CQ07799 665 aa3.71□□□□□ -1.82
PRP11YDL043C YAP7Q08182 245 aa3.71□□□□□ -1.82
PRP11YDL043C UAF30Q08747 228 aa3.71□□□□□ -1.82
PRP11YDL043C UIP4Q08926 304 aa3.71□□□□□ -1.82
PRP11YDL043C VAM3Q12241 283 aa3.71□□□□□ -1.82
PRP11YDL043C PSY3Q12318 242 aa3.71□□□□□ -1.82
PRP11YDL043C PFK27Q12471 397 aaPredicted RBP3.71□□□□□ -1.82
PRP11YDL043C FRE6Q12473 712 aa3.71□□□□□ -1.82
PRP11YDL043C SET6Q12529 373 aa3.71□□□□□ -1.82
PRP11YDL043C TY1B-DR4Q07793 1604 aa3.7□□□□□ -1.82
PRP11YDL043C CDC36P06100 191 aaPredicted RBP3.7□□□□□ -1.82
PRP11YDL043C COR1P07256 457 aa3.7□□□□□ -1.82
PRP11YDL043C DST1P07273 309 aa3.7□□□□□ -1.82
PRP11YDL043C CHS1P08004 1131 aa3.7□□□□□ -1.82
PRP11YDL043C PRB1P09232 635 aa3.7□□□□□ -1.82
PRP11YDL043C RPL1AP0CX43 217 aaKnown RBP3.7□□□□□ -1.82
PRP11YDL043C RPL1BP0CX44 217 aaKnown RBP3.7□□□□□ -1.82
PRP11YDL043C RPL35AP0CX84 120 aaKnown RBP3.7□□□□□ -1.82
PRP11YDL043C RPL35BP0CX85 120 aaKnown RBP3.7□□□□□ -1.82
PRP11YDL043C IFM1P25038 676 aa3.7□□□□□ -1.82
PRP11YDL043C PTP1P25044 335 aa3.7□□□□□ -1.82
PRP11YDL043C RAD57P25301 460 aa3.7□□□□□ -1.82
PRP11YDL043C GID7P25569 745 aa3.7□□□□□ -1.82
PRP11YDL043C BUD23P25627 275 aaPredicted RBP3.7□□□□□ -1.82
PRP11YDL043C AFG1P32317 509 aa3.7□□□□□ -1.82
PRP11YDL043C HXT1P32465 570 aa3.7□□□□□ -1.82
PRP11YDL043C RPT5P33297 434 aaKnown RBP3.7□□□□□ -1.82
PRP11YDL043C HOT13P36078 116 aa3.7□□□□□ -1.82
PRP11YDL043C SPP381P38282 291 aaPredicted RBP3.7□□□□□ -1.82
PRP11YDL043C MBB1P39534 108 aa3.7□□□□□ -1.82
PRP11YDL043C FRT2P39734 528 aa3.7□□□□□ -1.82
PRP11YDL043C RPH1P39956 796 aa3.7□□□□□ -1.82
PRP11YDL043C PCL6P40038 420 aa3.7□□□□□ -1.82
PRP11YDL043C YER085CP40058 173 aa3.7□□□□□ -1.82
PRP11YDL043C DDI1P40087 428 aa3.7□□□□□ -1.82
PRP11YDL043C YFH7P43591 353 aa3.7□□□□□ -1.82
PRP11YDL043C SNG1P46950 547 aa3.7□□□□□ -1.82
PRP11YDL043C TAX4P47030 604 aa3.7□□□□□ -1.82
PRP11YDL043C BNA3P47039 444 aaKnown RBP3.7□□□□□ -1.82
PRP11YDL043C YJR056CP47115 236 aa3.7□□□□□ -1.82
PRP11YDL043C PRP24P49960 444 aaKnown RBP3.7□□□□□ -1.82
PRP11YDL043C YGL108CP53139 140 aa3.7□□□□□ -1.82
PRP11YDL043C PDR16P53860 351 aaKnown RBP3.7□□□□□ -1.82
PRP11YDL043C NOP13P53883 403 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
PRP11YDL043C CTF19Q02732 369 aa3.7□□□□□ -1.82
PRP11YDL043C ACL4Q03771 387 aa3.7□□□□□ -1.82
PRP11YDL043C DCR2Q05924 578 aa3.7□□□□□ -1.82
PRP11YDL043C YDL057WQ07379 328 aa3.7□□□□□ -1.82
PRP11YDL043C ZEO1Q08245 113 aa3.7□□□□□ -1.82
PRP11YDL043C DCI1Q08558 271 aa3.7□□□□□ -1.82
PRP11YDL043C WIP1Q2V2P8 89 aa3.7□□□□□ -1.82
PRP11YDL043C MDS3P53094 1487 aa3.7□□□□□ -1.82
PRP11YDL043C RPL25P04456 142 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C RHO2P06781 192 aa3.69□□□□□ -1.82
PRP11YDL043C MET2P08465 486 aa3.69□□□□□ -1.82
PRP11YDL043C RPL4AP10664 362 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C SNF3P10870 884 aa3.69□□□□□ -1.82
PRP11YDL043C HPR1P17629 752 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C CKI1P20485 582 aa3.69□□□□□ -1.82
PRP11YDL043C RNA15P25299 296 aaPredicted RBP3.69□□□□□ -1.82
PRP11YDL043C GIT1P25346 518 aa3.69□□□□□ -1.82
PRP11YDL043C COT1P32798 439 aa3.69□□□□□ -1.82
PRP11YDL043C AIM29P36154 155 aa3.69□□□□□ -1.82
PRP11YDL043C RFS1P38234 210 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C TAE1P38340 232 aa3.69□□□□□ -1.82
PRP11YDL043C GRE3P38715 327 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
PRP11YDL043C BZZ1P38822 633 aa3.69□□□□□ -1.82
PRP11YDL043C YHR210CP38893 341 aa3.69□□□□□ -1.82
PRP11YDL043C FMC1P40491 155 aa3.69□□□□□ -1.82
PRP11YDL043C PAC11P40960 533 aa3.69□□□□□ -1.82
PRP11YDL043C FAR7P43592 221 aa3.69□□□□□ -1.82
PRP11YDL043C IRC7P43623 340 aa3.69□□□□□ -1.82
PRP11YDL043C RPL4BP49626 362 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C MRM2P53123 320 aa3.69□□□□□ -1.82
PRP11YDL043C VOA1P53262 265 aa3.69□□□□□ -1.82
PRP11YDL043C RPT4P53549 437 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C PRM1P53835 661 aa3.69□□□□□ -1.82
PRP11YDL043C DUG3P53871 357 aa3.69□□□□□ -1.82
PRP11YDL043C IMP4P53941 290 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C DIA1P54005 336 aa3.69□□□□□ -1.82
PRP11YDL043C NUP116Q02630 1113 aa3.69□□□□□ -1.82
PRP11YDL043C PET117Q02771 107 aa3.69□□□□□ -1.82
PRP11YDL043C HER2Q03557 464 aa3.69□□□□□ -1.82
PRP11YDL043C FAR10Q06001 478 aa3.69□□□□□ -1.82
PRP11YDL043C SPH1Q06160 661 aa3.69□□□□□ -1.82
PRP11YDL043C YPR147CQ06522 304 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C DIS3Q08162 1001 aaKnown RBP3.69□□□□□ -1.82
PRP11YDL043C THP1Q08231 455 aa3.69□□□□□ -1.82
PRP11YDL043C YOR365CQ08844 703 aa3.69□□□□□ -1.82
PRP11YDL043C CSM4Q08955 156 aa3.69□□□□□ -1.82
PRP11YDL043C RRP12Q12754 1228 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms