RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	RIM2	P38127	377 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	MBB1	P39534	108 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	PRM9	P39551	298 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	DSE1	P40077	573 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	YGL108C	P53139	140 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	OGG1	P53397	376 aa	Predicted RBP	4.12	□□□□□ -1.75
SHE1	YBL031W	TMA20	P89886	181 aa	Predicted RBP	4.12	□□□□□ -1.75
SHE1	YBL031W	KAP120	Q02932	1032 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	MMT1	Q03218	510 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	SLD5	Q03406	294 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	TVP15	Q03860	143 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	ARO80	Q04052	950 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	RBS1	Q05672	457 aa	Known RBP	4.12	□□□□□ -1.75
SHE1	YBL031W	SSQ1	Q05931	657 aa	Predicted RBP	4.12	□□□□□ -1.75
SHE1	YBL031W	NDL1	Q06568	189 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	YET3	Q07451	203 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	THI20	Q08224	551 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	NRT1	Q08485	598 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	VIK1	Q12045	647 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	NSL1	Q12143	216 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	RAD52	P06778	471 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	NDI1	P32340	513 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	PHA2	P32452	334 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	SMI1	P32566	505 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	SPR1	P32603	445 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	SRB2	P34162	210 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	GCS1	P35197	352 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	TUL1	P36096	758 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	DBP7	P36120	742 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	TCM62	P38228	572 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	RRP3	P38712	501 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	GND1	P38720	489 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	TDA11	P38854	504 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	ALD5	P40047	520 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	PDS1	P40316	373 aa	Predicted RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	PEP8	P40335	379 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	GCN20	P43535	752 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	FET5	P43561	622 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	GAT1	P43574	510 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	PXR1	P53335	271 aa	Predicted RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	CIK1	Q01649	594 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	CWC21	Q03375	135 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	NHP10	Q03435	203 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	ACL4	Q03771	387 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	MSS11	Q03825	758 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	RRP45	Q05636	305 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	GGA1	Q06336	557 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	SHS1	Q07657	551 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	EFG1	Q3E705	233 aa	Known RBP	4.11	□□□□□ -1.75
SHE1	YBL031W	IZH4	Q99393	312 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	YLR278C	Q05854	1341 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	HKR1	P41809	1802 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	MYO1	P08964	1928 aa		4.11	□□□□□ -1.75
SHE1	YBL031W	CAR1	P00812	333 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	RAD10	P06838	210 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	RPL42A	P0CX27	106 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	RPL42B	P0CX28	106 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	HOM3	P10869	527 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	NMT1	P14743	455 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	RPB4	P20433	221 aa	Predicted RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	YCR007C	P25354	239 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	SNT1	P25357	1226 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	CSM1	P25651	190 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	IDH2	P28241	369 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	MSN2	P33748	704 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	YKR015C	P36111	568 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	PIM1	P36775	1133 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	MAK5	P38112	773 aa	Predicted RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	YHR182W	P38870	785 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	YHB1	P39676	399 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	YGR149W	P48236	432 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	OCA1	P50946	238 aa	Predicted RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	USE1	P53146	245 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	BUD32	P53323	261 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	SCW4	P53334	386 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	BIO4	P53630	237 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	YNL134C	P53912	376 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	ALG11	P53954	548 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	SLM2	P53955	656 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	INP2	Q03824	705 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	ARX1	Q03862	593 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	HPT1	Q04178	221 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	YMR254C	Q04838	102 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	ROY1	Q04847	553 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	HEL2	Q05580	639 aa	Known RBP	4.1	□□□□□ -1.75
SHE1	YBL031W	YLR345W	Q06137	509 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	YLR352W	Q06479	807 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SHE1	YBL031W	GET4	Q12125	312 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	ADF1	Q2V2Q1	113 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	AFI1	Q99222	893 aa		4.1	□□□□□ -1.75
SHE1	YBL031W	SUC2	P00724	532 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	CBP2	P03874	630 aa	Predicted RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	RPL24A	P04449	155 aa	Known RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	HEM2	P05373	342 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	GPH1	P06738	902 aa	Known RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	CHS1	P08004	1131 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	BAR1	P12630	587 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	FAR1	P21268	830 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	RPS2	P25443	254 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms