RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CLP1Q92989 425 aaKnown RBP14.81□□□□□ -0.04
SF3B3-202ENST00000562722 PPP2R3CQ969Q6 453 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 ZNF689Q96CS4 500 aaPredicted RBP14.81□□□□□ -0.04
SF3B3-202ENST00000562722 NEK1Q96PY6 1258 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 PLVAPQ9BX97 442 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 AGO4Q9HCK5 861 aaKnown RBP14.81□□□□□ -0.04
SF3B3-202ENST00000562722 PRKAG3Q9UGI9 489 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 PADI3Q9ULW8 664 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 ARIH1Q9Y4X5 557 aaPredicted RBP14.81□□□□□ -0.04
SF3B3-202ENST00000562722 PCDHA2Q9Y5H9 948 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 V9GY48 417 aaPredicted RBP14.81□□□□□ -0.04
SF3B3-202ENST00000562722 NFASCO94856 1347 aa14.81□□□□□ -0.04
SF3B3-202ENST00000562722 GOLGA8AA7E2F4 631 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 GOLGA8BA8MQT2 603 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 DCXO43602 365 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 MMP1P03956 469 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 LINC00271P0C7V0 271 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 SCG2P13521 617 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 FGD1P98174 961 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 KRT76Q01546 638 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 ZP2Q05996 745 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 NFX1Q12986 1120 aaKnown RBP14.8□□□□□ -0.04
SF3B3-202ENST00000562722 ITGB3BPQ13352 177 aaPredicted RBP14.8□□□□□ -0.04
SF3B3-202ENST00000562722 COL19A1Q14993 1142 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 TMEM266Q2M3C6 531 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 FAM160B1Q5W0V3 765 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 TYW1BQ6NUM6 668 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 ADHFE1Q8IWW8 467 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 CMTR2Q8IYT2 770 aaKnown RBP14.8□□□□□ -0.04
SF3B3-202ENST00000562722 CELF4Q9BZC1 486 aaKnown RBP14.8□□□□□ -0.04
SF3B3-202ENST00000562722 TMEM260Q9NX78 707 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 SQORQ9Y6N5 450 aa14.8□□□□□ -0.04
SF3B3-202ENST00000562722 SMIM35A0A1B0GVV1 85 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 hCG_1984214I3L0E3 225 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 STXBP3O00186 592 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 GTF2F1P35269 517 aaKnown RBP eCLIP14.79□□□□□ -0.04
SF3B3-202ENST00000562722 LTBRP36941 435 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 NDUFV1P49821 464 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 SLC26A2P50443 739 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 AP3B2Q13367 1082 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 SPOUT1Q5T280 376 aaKnown RBP14.79□□□□□ -0.04
SF3B3-202ENST00000562722 MTHFD1LQ6UB35 978 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 RTN4RL1Q86UN2 441 aaPredicted RBP14.79□□□□□ -0.04
SF3B3-202ENST00000562722 CKAP2LQ8IYA6 745 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 ZNF713Q8N859 430 aaPredicted RBP14.79□□□□□ -0.04
SF3B3-202ENST00000562722 POP1Q99575 1024 aaKnown RBP14.79□□□□□ -0.04
SF3B3-202ENST00000562722 GLT8D2Q9H1C3 349 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 TCEAL9Q9UHQ7 104 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 BRPF3Q9ULD4 1205 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 PLAGL2Q9UPG8 496 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 IGSF9BQ9UPX0 1349 aa14.79□□□□□ -0.04
SF3B3-202ENST00000562722 KLF18A0A0U1RQI7 1052 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 DENND3A2RUS2 1198 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 MEIS1O00470 390 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 LINC01565O15544 149 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 KLRC1P26715 233 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 SREBF1P36956 1147 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 GATMP50440 423 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 DLX2Q07687 328 aaPredicted RBP14.78□□□□□ -0.04
SF3B3-202ENST00000562722 CTC1Q2NKJ3 1217 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 JAKMIP3Q5VZ66 844 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 PDXDC2PQ6P474 469 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 DHX32Q7L7V1 743 aaKnown RBP14.78□□□□□ -0.04
SF3B3-202ENST00000562722 PLA2G4DQ86XP0 818 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 TEX2Q8IWB9 1127 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 NME8Q8N427 588 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 KLHL23Q8NBE8 558 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 P2RX5Q93086 422 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 UPF3BQ9BZI7 483 aaKnown RBP14.78□□□□□ -0.04
SF3B3-202ENST00000562722 ZNF302Q9NR11 478 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 BARHL2Q9NY43 387 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 CD207Q9UJ71 328 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 PCDHB7Q9Y5E2 793 aa14.78□□□□□ -0.04
SF3B3-202ENST00000562722 MBTPS2O43462 519 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 HBP1O60381 514 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 PPFIA3O75145 1194 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 TBX10O75333 385 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 RPS6KA5O75582 802 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 CCNE2O96020 404 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 ITGB1P05556 798 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 SMAD4Q13485 552 aaKnown RBP14.77□□□□□ -0.05
SF3B3-202ENST00000562722 SMAD2Q15796 467 aaKnown RBP14.77□□□□□ -0.05
SF3B3-202ENST00000562722 NAALADL2Q58DX5 795 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 MIS18BP1Q6P0N0 1132 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 TRMT1LQ7Z2T5 733 aaKnown RBP14.77□□□□□ -0.05
SF3B3-202ENST00000562722 ATP8B4Q8TF62 1192 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 POF1BQ8WVV4 589 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 PPP1R16BQ96T49 567 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 TMX1Q9H3N1 280 aa14.77□□□□□ -0.05
SF3B3-202ENST00000562722 KDM3AQ9Y4C1 1321 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 ATG7O95352 703 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 DNAJB1P25685 340 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
SF3B3-202ENST00000562722 IRS1P35568 1242 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 SARSP49591 514 aaKnown RBP14.76□□□□□ -0.05
SF3B3-202ENST00000562722 EXOSC10Q01780 885 aaKnown RBP14.76□□□□□ -0.05
SF3B3-202ENST00000562722 FUT2Q10981 343 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 KRT32Q14532 448 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 ADCK5Q3MIX3 580 aa14.76□□□□□ -0.05
SF3B3-202ENST00000562722 BMP2KLQ5H9B9 411 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms