RNA–Protein interactions for RNA: ENST00000535844.1

AC048338.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC048338.1, Length 2,748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048338.1-201ENST00000535844 ARMCX6Q7L4S7 300 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 RPUSD2Q8IZ73 545 aaKnown RBP12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 SCFD1Q8WVM8 642 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 RPGRQ92834 1020 aaKnown RBP12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 MKL1Q969V6 931 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 TMX4Q9H1E5 349 aaPredicted RBP12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 KDM4CQ9H3R0 1056 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 USP21Q9UK80 565 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 POTEFA5A3E0 1075 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 ZNF233A6NK53 670 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 PLA2G4BP0C869 781 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 PECAM1P16284 738 aaPredicted RBP12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 CASP5P51878 434 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 ADAM9Q13443 819 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 NAB2Q15742 525 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 CFAP58Q5T655 872 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 IFT20Q8IY31 132 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 PROM2Q8N271 834 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 CASKIN2Q8WXE0 1202 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 MXD3Q9BW11 206 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 DDX4Q9NQI0 724 aaKnown RBP12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 DAGLAQ9Y4D2 1042 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 SRCAPQ6ZRS2 3230 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
AC048338.1-201ENST00000535844 SHTN1A0MZ66 631 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 GRID2IPA4D2P6 1211 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 C6orf229H3BNL8 230 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 MEIS1O00470 390 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 KCNK3O14649 394 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 GCKP35557 465 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 NT5C2P49902 561 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 GTF2IP78347 998 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 GUCY1A3Q02108 690 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 ORC2Q13416 577 aaPredicted RBP12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 SLC18A3Q16572 532 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 CEP57Q86XR8 500 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 TRIM59Q8IWR1 403 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 RNF10Q8N5U6 811 aaKnown RBP12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 CUL5Q93034 780 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 CAVIN3Q969G5 261 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 BCAS3Q9H6U6 928 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 PSTPIP2Q9H939 334 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 PNMA6FA0A0J9YX94 578 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 RBAK-RBAKDNI3L0D1 243 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 RAD51CO43502 376 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 PLCG2P16885 1265 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 SLC9A1P19634 815 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 ABCD1P33897 745 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 ZNF543Q08ER8 600 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 CHCHD3Q9NX63 227 aaKnown RBP12.22□□□□□ -0.45
AC048338.1-201ENST00000535844 TAL1P17542 331 aaPredicted RBP12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 NR2F2P24468 414 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 SMARCA1P28370 1054 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 SNAP25P60880 206 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 PTK2Q05397 1052 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 PAK2Q13177 524 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 HLTFQ14527 1009 aaKnown RBP eCLIP12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 ASIC2Q16515 512 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 ALS2CLQ60I27 953 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 INPP4AQ96PE3 977 aaPredicted RBP12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 GDF3Q9NR23 364 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 POLLQ9UGP5 575 aa12.21□□□□□ -0.45
AC048338.1-201ENST00000535844 FAM196BA6NMK8 535 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 NDUFAB1O14561 156 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 MED24O75448 989 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 SCNN1DP51172 638 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 CLNS1AP54105 237 aaKnown RBP12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 PSMC6P62333 389 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 DCAF17Q5H9S7 520 aaPredicted RBP12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 RC3H1Q5TC82 1133 aaKnown RBP12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 MEI1Q5TIA1 1274 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 PPP4R3AQ6IN85 833 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 PRR5LQ6MZQ0 368 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 CCDC65Q8IXS2 484 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 AP1M1Q9BXS5 423 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 LRRC27Q9C0I9 530 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 KCTD10Q9H3F6 313 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 PCDHA2Q9Y5H9 948 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 MYH4Q9Y623 1939 aa12.21□□□□□ -0.46
AC048338.1-201ENST00000535844 TTLL1O95922 423 aa12.2□□□□□ -0.46
AC048338.1-201ENST00000535844 CYP11B2P19099 503 aa12.2□□□□□ -0.46
AC048338.1-201ENST00000535844 PABPC4Q13310 644 aaKnown RBP eCLIP12.2□□□□□ -0.461e-7■■■□□ 18.6
AC048338.1-201ENST00000535844 RINLQ6ZS11 566 aa12.2□□□□□ -0.46
AC048338.1-201ENST00000535844 MAATS1Q7Z4T9 603 aa12.2□□□□□ -0.46
AC048338.1-201ENST00000535844 OR2W6PQ8NHA6 318 aa12.2□□□□□ -0.46
AC048338.1-201ENST00000535844 EDEM3Q9BZQ6 932 aa12.2□□□□□ -0.46
AC048338.1-201ENST00000535844 LUC7LQ9NQ29 371 aaKnown RBP12.2□□□□□ -0.46
AC048338.1-201ENST00000535844 TSKSQ9UJT2 592 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms