RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
VARS2-208ENST00000477052 CLUL1Q15846 466 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 LEXMQ3ZCV2 418 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 PTCRAQ6ISU1 281 aaPredicted RBP13.29□□□□□ -0.28
VARS2-208ENST00000477052 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 MTHFD1LQ6UB35 978 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
VARS2-208ENST00000477052 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 RC3H2Q9HBD1 1191 aaKnown RBP13.29□□□□□ -0.28
VARS2-208ENST00000477052 ALG13Q9NP73 1137 aaKnown RBP13.29□□□□□ -0.28
VARS2-208ENST00000477052 PADI3Q9ULW8 664 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 TRPV2Q9Y5S1 764 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 SNX14Q9Y5W7 946 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 MRPL42Q9Y6G3 142 aaKnown RBP13.29□□□□□ -0.28
VARS2-208ENST00000477052 NFASCO94856 1347 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 ADGRA3Q8IWK6 1321 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 DHX15O43143 795 aaKnown RBP13.28□□□□□ -0.28
VARS2-208ENST00000477052 DGKIO75912 1065 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 FOSP01100 380 aaPredicted RBP13.28□□□□□ -0.28
VARS2-208ENST00000477052 SCG2P13521 617 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 ATP4AP20648 1035 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 PKN1Q16512 942 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 PFKFB3Q16875 520 aaPredicted RBP13.28□□□□□ -0.28
VARS2-208ENST00000477052 TIGD5Q53EQ6 642 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 SWSAP1Q6NVH7 229 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 ABHD15Q6UXT9 468 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 PLPPR4Q7Z2D5 763 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 ZNF689Q96CS4 500 aaPredicted RBP13.28□□□□□ -0.28
VARS2-208ENST00000477052 LRFN3Q9BTN0 628 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
VARS2-208ENST00000477052 TMX1Q9H3N1 280 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 NSUN3Q9H649 340 aaKnown RBP13.28□□□□□ -0.28
VARS2-208ENST00000477052 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 CLDND1Q9NY35 253 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 PCDHA2Q9Y5H9 948 aa13.28□□□□□ -0.28
VARS2-208ENST00000477052 TTC3P53804 2025 aa13.27□□□□□ -0.28
VARS2-208ENST00000477052 IGLV3-22A0A075B6J6 115 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 LINC01565O15544 149 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 MGEA5O60502 916 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 ATG7O95352 703 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 DNAJB1P25685 340 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 SSTR3P32745 418 aaPredicted RBP13.27□□□□□ -0.29
VARS2-208ENST00000477052 KRT76Q01546 638 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 DLX2Q07687 328 aaPredicted RBP13.27□□□□□ -0.29
VARS2-208ENST00000477052 HYAL1Q12794 435 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 NFX1Q12986 1120 aaKnown RBP13.27□□□□□ -0.29
VARS2-208ENST00000477052 PAK2Q13177 524 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 KRT32Q14532 448 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 IER5Q5VY09 327 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 PDXDC2PQ6P474 469 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 FAM178BQ8IXR5 827 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 GJA10Q969M2 543 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
VARS2-208ENST00000477052 C1QTNF1Q9BXJ1 281 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 NCOA5Q9HCD5 579 aaKnown RBP13.27□□□□□ -0.29
VARS2-208ENST00000477052 C11orf16Q9NQ32 467 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 HCSTQ9UBK5 93 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 NOC2LQ9Y3T9 749 aaKnown RBP13.27□□□□□ -0.29
VARS2-208ENST00000477052 PCDHGC5Q9Y5F6 944 aa13.27□□□□□ -0.29
VARS2-208ENST00000477052 IGKV6D-21A0A0A0MT36 114 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 GRXCR2A6NFK2 248 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 ZBTB42B2RXF5 422 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 M0QZ92 97 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 IPO5O00410 1097 aaKnown RBP13.26□□□□□ -0.29
VARS2-208ENST00000477052 DTNBO60941 627 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 CENPBP07199 599 aaPredicted RBP13.26□□□□□ -0.29
VARS2-208ENST00000477052 LTBRP36941 435 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 CCT2P78371 535 aaKnown RBP13.26□□□□□ -0.29
VARS2-208ENST00000477052 AP3B2Q13367 1082 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 CAMK1Q14012 370 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 RALGAPA2Q2PPJ7 1873 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 PRR16Q569H4 304 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 KIAA0319LQ8IZA0 1049 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 GJD3Q8N144 294 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 CRIPAKQ8N1N5 446 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 NEK9Q8TD19 979 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 ATP8B4Q8TF62 1192 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 CRYGNQ8WXF5 182 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 ZNF668Q96K58 619 aaPredicted RBP13.26□□□□□ -0.29
VARS2-208ENST00000477052 ZNF577Q9BSK1 485 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 ZNF302Q9NR11 478 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 IGSF9BQ9UPX0 1349 aa13.26□□□□□ -0.29
VARS2-208ENST00000477052 KIAA1671Q9BY89 1806 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 SMIM35A0A1B0GVV1 85 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 C5orf67F2Z3F1 127 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 hCG_1984214I3L0E3 225 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 VTNP04004 478 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 HMGB1P09429 215 aaKnown RBP13.25□□□□□ -0.29
VARS2-208ENST00000477052 RPS6KB1P23443 525 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 HSPA4P34932 840 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 IRS1P35568 1242 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 KIZQ2M2Z5 673 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 FAM160B1Q5W0V3 765 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 BLOC1S2Q6QNY1 142 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 NPAS4Q8IUM7 802 aa13.25□□□□□ -0.29
VARS2-208ENST00000477052 REXO1Q8N1G1 1221 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms