RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 FAM86B1E9PN63 330 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 PRPF3O43395 683 aaKnown RBP16.07■□□□□ 0.16
LINC01006-202ENST00000418309 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 REC8O95072 547 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 FAM86B2P0C5J1 330 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 PSMA5P28066 241 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 GNA11P29992 359 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 CTNNB1P35222 781 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 SLC26A2P50443 739 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 MCTP2Q6DN12 878 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 REXO1Q8N1G1 1221 aaKnown RBP16.07■□□□□ 0.16
LINC01006-202ENST00000418309 PHKBQ93100 1093 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 ZMYND12Q9H0C1 365 aa16.07■□□□□ 0.16
LINC01006-202ENST00000418309 AGO3Q9H9G7 860 aaKnown RBP16.07■□□□□ 0.16
LINC01006-202ENST00000418309 NCOR1O75376 2440 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 ESYT2A0FGR8 921 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 IPO5O00410 1097 aaKnown RBP16.06■□□□□ 0.16
LINC01006-202ENST00000418309 HBP1O60381 514 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 CCNE2O96020 404 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 CYP3A4P08684 503 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 KCNA5P22460 613 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 KLRC1P26715 233 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 BTG3Q14201 252 aaPredicted RBP16.06■□□□□ 0.16
LINC01006-202ENST00000418309 PKN1Q16512 942 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 SWSAP1Q6NVH7 229 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 MIS18BP1Q6P0N0 1132 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 MTHFD1LQ6UB35 978 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 ABHD15Q6UXT9 468 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 EP400NLQ6ZTU2 488 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 CKAP2LQ8IYA6 745 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 NME8Q8N427 588 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 ZNF577Q9BSK1 485 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 CELF4Q9BZC1 486 aaKnown RBP16.06■□□□□ 0.16
LINC01006-202ENST00000418309 ZNF302Q9NR11 478 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 TCEAL9Q9UHQ7 104 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 GINS2Q9Y248 185 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 SQORQ9Y6N5 450 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 LOXHD1Q8IVV2 1947 aa16.06■□□□□ 0.16
LINC01006-202ENST00000418309 ADGRA3Q8IWK6 1321 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 IGKV6D-21A0A0A0MT36 114 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.05■□□□□ 0.16
LINC01006-202ENST00000418309 SMIM35A0A1B0GVV1 85 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 ADAMTS3O15072 1205 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 IBSPP21815 317 aaPredicted RBP16.05■□□□□ 0.16
LINC01006-202ENST00000418309 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
LINC01006-202ENST00000418309 KRT76Q01546 638 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 PAK2Q13177 524 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 TIGD5Q53EQ6 642 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 TRMT1LQ7Z2T5 733 aaKnown RBP16.05■□□□□ 0.16
LINC01006-202ENST00000418309 CCDC60Q8IWA6 550 aaPredicted RBP16.05■□□□□ 0.16
LINC01006-202ENST00000418309 BICD2Q8TD16 824 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 ATP8B4Q8TF62 1192 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 SLC26A6Q9BXS9 759 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 FTHL17Q9BXU8 183 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 TBC1D22BQ9NU19 505 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 PADI3Q9ULW8 664 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 RWDD3Q9Y3V2 267 aa16.05■□□□□ 0.16
LINC01006-202ENST00000418309 TTC3P53804 2025 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 RALGAPA2Q2PPJ7 1873 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 IGLV3-22A0A075B6J6 115 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 DHX15O43143 795 aaKnown RBP16.04■□□□□ 0.16
LINC01006-202ENST00000418309 RB1P06400 928 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 COL9A1P20849 921 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 BMPR1AP36894 532 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 SETQ01105 290 aaPredicted RBP16.04■□□□□ 0.16
LINC01006-202ENST00000418309 NFX1Q12986 1120 aaKnown RBP16.04■□□□□ 0.16
LINC01006-202ENST00000418309 PRR16Q569H4 304 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 TCEAL5Q5H9L2 206 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 FBXL16Q8N461 479 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 CCDC148Q8NFR7 591 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 RASGRP4Q8TDF6 673 aa16.04■□□□□ 0.16
LINC01006-202ENST00000418309 C11orf84Q9BUA3 381 aaPredicted RBP16.04■□□□□ 0.16
LINC01006-202ENST00000418309 BRWD1Q9NSI6 2320 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 XIRP2A4UGR9 3374 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 IGSF9BQ9UPX0 1349 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 EVPLQ92817 2033 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 DGKIO75912 1065 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 STAG3L1P0CL83 205 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
LINC01006-202ENST00000418309 TMEM266Q2M3C6 531 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 LEXMQ3ZCV2 418 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 ZNF484Q5JVG2 852 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
LINC01006-202ENST00000418309 CRYGNQ8WXF5 182 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 LINC01599Q8WXQ3 324 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 ZNF689Q96CS4 500 aaPredicted RBP16.03■□□□□ 0.16
LINC01006-202ENST00000418309 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
LINC01006-202ENST00000418309 AGXT2Q9BYV1 514 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 NSUN3Q9H649 340 aaKnown RBP16.03■□□□□ 0.16
LINC01006-202ENST00000418309 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
LINC01006-202ENST00000418309 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 LRFN2Q9ULH4 789 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 SAMM50Q9Y512 469 aa16.03■□□□□ 0.16
LINC01006-202ENST00000418309 MYH9P35579 1960 aaKnown RBP16.03■□□□□ 0.16
LINC01006-202ENST00000418309 COL1A2P08123 1366 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 NID2Q14112 1375 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 COL4A6Q14031 1691 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms