RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 RNPC3Q96LT9 517 aaKnown RBP21.05■□□□□ 0.96
CIRBP-201ENST00000320936 FTOQ9C0B1 505 aaKnown RBP eCLIP21.05■□□□□ 0.968e-7■□□□□ 9.3
CIRBP-201ENST00000320936 MAFBQ9Y5Q3 323 aaPredicted RBP21.05■□□□□ 0.96
CIRBP-201ENST00000320936 RFC2P35250 354 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 TXKP42681 527 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 TRAPPC10P48553 1259 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 UGCGQ16739 394 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 ZNF618Q5T7W0 954 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 RUFY4Q6ZNE9 571 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 RSPH3Q86UC2 560 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 BANK1Q8NDB2 785 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 ZBTB10Q96DT7 871 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 FAM49AQ9H0Q0 323 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-201ENST00000320936 OATP04181 439 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 NBR1Q14596 966 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 TRIM71Q2Q1W2 868 aaKnown RBP21.04■□□□□ 0.96
CIRBP-201ENST00000320936 TAF2Q6P1X5 1199 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 BBXQ8WY36 941 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-201ENST00000320936 INTS4Q96HW7 963 aaKnown RBP21.04■□□□□ 0.96
CIRBP-201ENST00000320936 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.04■□□□□ 0.966e-8■■□□□ 11.6
CIRBP-201ENST00000320936 TTC12Q9H892 705 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-201ENST00000320936 SEPT9Q9UHD8 586 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-201ENST00000320936 PCDHA12Q9UN75 941 aa21.04■□□□□ 0.96
CIRBP-201ENST00000320936 COL1A2P08123 1366 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 EML1O00423 815 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 ATP4AP20648 1035 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 ADAM17P78536 824 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 RBL2Q08999 1139 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 ORC2Q13416 577 aaPredicted RBP21.03■□□□□ 0.96
CIRBP-201ENST00000320936 ZNF484Q5JVG2 852 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 MARCH8Q5T0T0 291 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 B3GNT9Q6UX72 402 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 ZNF365Q70YC5 407 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 TMEM60Q9H2L4 133 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 NRBP2Q9NSY0 501 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 CEP131Q9UPN4 1083 aa21.03■□□□□ 0.96
CIRBP-201ENST00000320936 MBLAC1A4D2B0 266 aaPredicted RBP21.02■□□□□ 0.95
CIRBP-201ENST00000320936 RSPH10B2B2RC85 870 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 ZNF862O60290 1169 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 FGBP02675 491 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 PFKMP08237 780 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 OR52Z1P0C646 297 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 RSPH10BP0C881 870 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 TMEM240Q5SV17 173 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 OTOP2Q7RTS6 562 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 DNAJB3Q8WWF6 145 aa21.02■□□□□ 0.95
CIRBP-201ENST00000320936 MTIF3Q9H2K0 278 aaKnown RBP21.02■□□□□ 0.95
CIRBP-201ENST00000320936 EVPLQ92817 2033 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 LAMA2P24043 3122 aaKnown RBP21.01■□□□□ 0.95
CIRBP-201ENST00000320936 ZBBXA8MT70 800 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 CAND2O75155 1236 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 PARNO95453 639 aaKnown RBP21.01■□□□□ 0.95
CIRBP-201ENST00000320936 ACTN1P12814 892 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 KLRC1P26715 233 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 PSMC5P62195 406 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 MTHFD1LQ6UB35 978 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 C16orf59Q7L2K0 433 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 MTMR9Q96QG7 549 aa21.01■□□□□ 0.95
CIRBP-201ENST00000320936 DDX11L8A8MPP1 907 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 M0QZ92 97 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 DKC1O60832 514 aaKnown RBP eCLIP21■□□□□ 0.95
CIRBP-201ENST00000320936 QARSP47897 775 aaKnown RBP21■□□□□ 0.95
CIRBP-201ENST00000320936 CYP4A11Q02928 519 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 EPHA7Q15375 998 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 TMEM266Q2M3C6 531 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 RILPL1Q5EBL4 403 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 FERMT3Q86UX7 667 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 METTL13Q8N6R0 699 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 LXNQ9BS40 222 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 PCDHB6Q9Y5E3 794 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 PCDHA2Q9Y5H9 948 aa21■□□□□ 0.95
CIRBP-201ENST00000320936 SIP14410 1827 aa20.99■□□□□ 0.95
CIRBP-201ENST00000320936 POTEMA6NI47 508 aa20.99■□□□□ 0.95
CIRBP-201ENST00000320936 P4HBP07237 508 aaKnown RBP20.99■□□□□ 0.95
CIRBP-201ENST00000320936 TOB1P50616 345 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-201ENST00000320936 SPIRE1Q08AE8 756 aa20.99■□□□□ 0.95
CIRBP-201ENST00000320936 TMEM62Q0P6H9 643 aa20.99■□□□□ 0.95
CIRBP-201ENST00000320936 MTERF2Q49AM1 385 aa20.99■□□□□ 0.95
CIRBP-201ENST00000320936 XKR3Q5GH77 459 aa20.99■□□□□ 0.95
CIRBP-201ENST00000320936 TET1Q8NFU7 2136 aa20.99■□□□□ 0.95
CIRBP-201ENST00000320936 DYDC2Q96IM9 177 aa20.99■□□□□ 0.95
CIRBP-201ENST00000320936 ARID2Q68CP9 1835 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 TMEM150BA6NC51 233 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 ZBTB42B2RXF5 422 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 NBNO60934 754 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 C22orf31O95567 290 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 RPLP2P05387 115 aaKnown RBP20.98■□□□□ 0.95
CIRBP-201ENST00000320936 SYT1P21579 422 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 TECP42680 631 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 MRPS6P82932 125 aaKnown RBP20.98■□□□□ 0.95
CIRBP-201ENST00000320936 CTTNQ14247 550 aaKnown RBP20.98■□□□□ 0.95
CIRBP-201ENST00000320936 TRAF7Q6Q0C0 670 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 TPH2Q8IWU9 490 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 SPRYD3Q8NCJ5 442 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 RGL1Q9NZL6 768 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 LAMA3Q16787 3333 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 LOXHD1Q8IVV2 1947 aa20.98■□□□□ 0.95
CIRBP-201ENST00000320936 SMIM35A0A1B0GVV1 85 aa20.97■□□□□ 0.95
CIRBP-201ENST00000320936 TBC1D8BQ0IIM8 1120 aa20.97■□□□□ 0.95
CIRBP-201ENST00000320936 PTGDRQ13258 359 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms