RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeast

Gene PRE2, Length 864 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE2	YPR103W	NFI1	Q12216	726 aa		4.9	□□□□□ -1.63
PRE2	YPR103W	RPS8A	P0CX39	200 aa	Known RBP	4.89	□□□□□ -1.63
PRE2	YPR103W	RPS8B	P0CX40	200 aa	Known RBP	4.89	□□□□□ -1.63
PRE2	YPR103W	SPT15	P13393	240 aa	Known RBP	4.89	□□□□□ -1.63
PRE2	YPR103W	CBS2	P14905	389 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	YCL068C	P25593	260 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	VPH1	P32563	840 aa	Known RBP	4.89	□□□□□ -1.63
PRE2	YPR103W	MRPL4	P36517	319 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	CHK1	P38147	527 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	MNL1	P38888	796 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	TOS3	P43637	560 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	CCE1	Q03702	353 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	URC2	Q04411	772 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	RAX1	Q08760	435 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	NCA2	Q12374	616 aa		4.89	□□□□□ -1.63
PRE2	YPR103W	RPL12A	P0CX53	165 aa	Known RBP	4.88	□□□□□ -1.63
PRE2	YPR103W	RPL12B	P0CX54	165 aa		4.88	□□□□□ -1.63
PRE2	YPR103W	EXG1	P23776	448 aa	Known RBP	4.88	□□□□□ -1.63
PRE2	YPR103W	KAR9	P32526	644 aa		4.88	□□□□□ -1.63
PRE2	YPR103W	SDH3	P33421	198 aa		4.88	□□□□□ -1.63
PRE2	YPR103W	MMF1	P40185	145 aa	Known RBP	4.88	□□□□□ -1.63
PRE2	YPR103W	REE1	P40893	198 aa		4.88	□□□□□ -1.63
PRE2	YPR103W	EPL1	P43572	832 aa		4.88	□□□□□ -1.63
PRE2	YPR103W	STE24	P47154	453 aa		4.88	□□□□□ -1.63
PRE2	YPR103W	ASN2	P49090	572 aa	Known RBP	4.88	□□□□□ -1.63
PRE2	YPR103W	IPK1	Q06667	281 aa		4.88	□□□□□ -1.63
PRE2	YPR103W	NOP6	Q07623	225 aa	Known RBP	4.88	□□□□□ -1.63
PRE2	YPR103W	CAP2	P13517	287 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	OPI1	P21957	404 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PRE2	YPR103W	PHA2	P32452	334 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	YBL059W	P34224	193 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	ATP3	P38077	311 aa	Known RBP	4.87	□□□□□ -1.63
PRE2	YPR103W	MSG5	P38590	489 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	SBE22	P38814	852 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	NDT80	P38830	627 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	YHR177W	P38867	453 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	PAC11	P40960	533 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	YPI1	P43587	155 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	EOS1	P53938	366 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	YRM1	Q12340	786 aa		4.87	□□□□□ -1.63
PRE2	YPR103W	HHF1	P02309	103 aa	Known RBP	4.86	□□□□□ -1.63
PRE2	YPR103W	MSP1	P28737	362 aa		4.86	□□□□□ -1.63
PRE2	YPR103W	TOA2	P32774	122 aa		4.86	□□□□□ -1.63
PRE2	YPR103W	LAS1	P36146	502 aa	Predicted RBP	4.86	□□□□□ -1.63
PRE2	YPR103W	SPG5	P42933	373 aa		4.86	□□□□□ -1.63
PRE2	YPR103W	RTT102	P53330	157 aa		4.86	□□□□□ -1.63
PRE2	YPR103W	PRP3	Q03338	469 aa	Predicted RBP	4.86	□□□□□ -1.63
PRE2	YPR103W	YFH1	Q07540	174 aa		4.86	□□□□□ -1.63
PRE2	YPR103W	TCB3	Q03640	1545 aa	Known RBP	4.86	□□□□□ -1.63
PRE2	YPR103W	SSC1	P0CS90	654 aa	Known RBP	4.85	□□□□□ -1.63
PRE2	YPR103W	DEG1	P31115	442 aa	Known RBP	4.85	□□□□□ -1.63
PRE2	YPR103W	RRP1	P35178	278 aa	Predicted RBP	4.85	□□□□□ -1.63
PRE2	YPR103W	SPP381	P38282	291 aa	Predicted RBP	4.85	□□□□□ -1.63
PRE2	YPR103W	WSS1	P38838	269 aa		4.85	□□□□□ -1.63
PRE2	YPR103W	YGR016W	P53209	190 aa		4.85	□□□□□ -1.63
PRE2	YPR103W	HER2	Q03557	464 aa		4.85	□□□□□ -1.63
PRE2	YPR103W	SMF3	Q12078	473 aa	Predicted RBP	4.85	□□□□□ -1.63
PRE2	YPR103W	ATP1	P07251	545 aa	Known RBP	4.84	□□□□□ -1.63
PRE2	YPR103W	DAD2	P36162	133 aa		4.84	□□□□□ -1.63
PRE2	YPR103W	PTH1	P38876	190 aa	Known RBP	4.84	□□□□□ -1.63
PRE2	YPR103W	RRN9	P53437	365 aa		4.84	□□□□□ -1.63
PRE2	YPR103W	CUE5	Q08412	411 aa	Known RBP	4.84	□□□□□ -1.63
PRE2	YPR103W	YDR061W	Q12298	539 aa		4.84	□□□□□ -1.63
PRE2	YPR103W	TY1B-DR4	Q07793	1604 aa		4.83	□□□□□ -1.64
PRE2	YPR103W	SLM5	P25345	492 aa	Known RBP	4.83	□□□□□ -1.64
PRE2	YPR103W	YGR117C	P53270	476 aa		4.83	□□□□□ -1.64
PRE2	YPR103W	CWC25	P53854	179 aa	Known RBP	4.83	□□□□□ -1.64
PRE2	YPR103W	SFG1	Q12507	346 aa		4.83	□□□□□ -1.64
PRE2	YPR103W	RPL6B	P05739	176 aa	Known RBP	4.82	□□□□□ -1.64
PRE2	YPR103W	SCH9	P11792	824 aa	Known RBP	4.82	□□□□□ -1.64
PRE2	YPR103W	FAA1	P30624	700 aa	Known RBP	4.82	□□□□□ -1.64
PRE2	YPR103W	MNS1	P32906	549 aa		4.82	□□□□□ -1.64
PRE2	YPR103W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
PRE2	YPR103W	KAP104	P38217	918 aa	Known RBP	4.82	□□□□□ -1.64
PRE2	YPR103W	SIF2	P38262	535 aa		4.82	□□□□□ -1.64
PRE2	YPR103W	CAJ1	P39101	391 aa		4.82	□□□□□ -1.64
PRE2	YPR103W	ATM1	P40416	690 aa		4.82	□□□□□ -1.64
PRE2	YPR103W	RPL6A	Q02326	176 aa	Known RBP	4.82	□□□□□ -1.64
PRE2	YPR103W	NUP116	Q02630	1113 aa		4.82	□□□□□ -1.64
PRE2	YPR103W	YDR286C	Q05530	114 aa		4.82	□□□□□ -1.64
PRE2	YPR103W	HRI1	Q05905	244 aa	Known RBP	4.82	□□□□□ -1.64
PRE2	YPR103W	ASA1	Q06822	443 aa		4.82	□□□□□ -1.64
PRE2	YPR103W	SRN2	Q99176	213 aa		4.82	□□□□□ -1.64
PRE2	YPR103W	POM152	P39685	1337 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	ARO2	P28777	376 aa	Known RBP	4.81	□□□□□ -1.64
PRE2	YPR103W	DPH5	P32469	300 aa	Predicted RBP	4.81	□□□□□ -1.64
PRE2	YPR103W	YEF1	P32622	495 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	SWD3	P38123	315 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	PAN6	P40459	309 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	YJR085C	P47131	105 aa	Known RBP	4.81	□□□□□ -1.64
PRE2	YPR103W	ABM1	P47146	123 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	MRM2	P53123	320 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	SPR6	Q01684	191 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	UTP6	Q02354	440 aa	Known RBP	4.81	□□□□□ -1.64
PRE2	YPR103W	SCW10	Q04951	389 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	MDM36	Q06820	579 aa		4.81	□□□□□ -1.64
PRE2	YPR103W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.81	□□□□□ -1.64
PRE2	YPR103W	ADH2	P00331	348 aa	Known RBP	4.8	□□□□□ -1.64
PRE2	YPR103W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms