RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	CAP2	P13517	287 aa		4.1	□□□□□ -1.75
HRT1	YOL133W	SKN1	P33336	771 aa		4.1	□□□□□ -1.75
HRT1	YOL133W	JEM1	P40358	645 aa		4.1	□□□□□ -1.75
HRT1	YOL133W	TOS3	P43637	560 aa		4.1	□□□□□ -1.75
HRT1	YOL133W	YJL055W	P47044	245 aa		4.1	□□□□□ -1.75
HRT1	YOL133W	STE24	P47154	453 aa		4.1	□□□□□ -1.75
HRT1	YOL133W	RRN9	P53437	365 aa		4.1	□□□□□ -1.75
HRT1	YOL133W	PRP3	Q03338	469 aa	Predicted RBP	4.1	□□□□□ -1.75
HRT1	YOL133W	RRG7	Q08774	242 aa	Predicted RBP	4.1	□□□□□ -1.75
HRT1	YOL133W	AHC1	Q12433	566 aa		4.1	□□□□□ -1.75
HRT1	YOL133W	DST1	P07273	309 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	RPL12A	P0CX53	165 aa	Known RBP	4.09	□□□□□ -1.75
HRT1	YOL133W	RPL12B	P0CX54	165 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
HRT1	YOL133W	YSC83	P32792	385 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	MNS1	P32906	549 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	YBR056W	P38081	501 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	SDS24	P38314	527 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	YER079W	P40052	210 aa	Known RBP	4.09	□□□□□ -1.75
HRT1	YOL133W	SEC28	P40509	296 aa	Known RBP	4.09	□□□□□ -1.75
HRT1	YOL133W	YJR085C	P47131	105 aa	Known RBP	4.09	□□□□□ -1.75
HRT1	YOL133W	BRO1	P48582	844 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	ROG1	P53118	685 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	CCE1	Q03702	353 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	URC2	Q04411	772 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	RBD2	Q12270	262 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	YRM1	Q12340	786 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	NCA2	Q12374	616 aa		4.09	□□□□□ -1.75
HRT1	YOL133W	CDC21	P06785	304 aa		4.08	□□□□□ -1.76
HRT1	YOL133W	SSC1	P0CS90	654 aa	Known RBP	4.08	□□□□□ -1.76
HRT1	YOL133W	PET123	P17558	318 aa		4.08	□□□□□ -1.76
HRT1	YOL133W	DAL2	P25335	343 aa		4.08	□□□□□ -1.76
HRT1	YOL133W	POP5	P28005	173 aa		4.08	□□□□□ -1.76
HRT1	YOL133W	SPR1	P32603	445 aa		4.08	□□□□□ -1.76
HRT1	YOL133W	GDI1	P39958	451 aa	Known RBP	4.08	□□□□□ -1.76
HRT1	YOL133W	PRE5	P40302	234 aa	Known RBP	4.08	□□□□□ -1.76
HRT1	YOL133W	PIB2	P53191	635 aa		4.08	□□□□□ -1.76
HRT1	YOL133W	ECM7	Q06200	448 aa		4.08	□□□□□ -1.76
HRT1	YOL133W	MDM36	Q06820	579 aa		4.08	□□□□□ -1.76
HRT1	YOL133W	OPI3	P05375	206 aa		4.07	□□□□□ -1.76
HRT1	YOL133W	PHO91	P27514	894 aa		4.07	□□□□□ -1.76
HRT1	YOL133W	DPH5	P32469	300 aa	Predicted RBP	4.07	□□□□□ -1.76
HRT1	YOL133W	YEL045C	P32616	141 aa		4.07	□□□□□ -1.76
HRT1	YOL133W	CSE2	P33308	149 aa		4.07	□□□□□ -1.76
HRT1	YOL133W	PFF1	P38244	976 aa		4.07	□□□□□ -1.76
HRT1	YOL133W	ABM1	P47146	123 aa		4.07	□□□□□ -1.76
HRT1	YOL133W	YDR541C	Q03049	344 aa		4.07	□□□□□ -1.76
HRT1	YOL133W	DAP2	P18962	818 aa		4.06	□□□□□ -1.76
HRT1	YOL133W	RXT2	P38255	430 aa		4.06	□□□□□ -1.76
HRT1	YOL133W	MDE1	P47095	244 aa		4.06	□□□□□ -1.76
HRT1	YOL133W	MLC1	P53141	149 aa		4.06	□□□□□ -1.76
HRT1	YOL133W	SXM1	Q04175	944 aa	Known RBP	4.06	□□□□□ -1.76
HRT1	YOL133W	SKS1	Q12505	502 aa		4.06	□□□□□ -1.76
HRT1	YOL133W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	RIP-Chip
HRT1	YOL133W	REV1	P12689	985 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	HXT1	P32465	570 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	YEF1	P32622	495 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	ATP3	P38077	311 aa	Known RBP	4.05	□□□□□ -1.76
HRT1	YOL133W	YHK8	P38776	514 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	YHR177W	P38867	453 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	MMF1	P40185	145 aa	Known RBP	4.05	□□□□□ -1.76
HRT1	YOL133W	MRM2	P53123	320 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	YGR117C	P53270	476 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	MDG1	P53885	366 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	NUP116	Q02630	1113 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	PEX25	Q02969	394 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	MHR1	Q06630	226 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	IPK1	Q06667	281 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	CUE5	Q08412	411 aa	Known RBP	4.05	□□□□□ -1.76
HRT1	YOL133W	PLP2	Q12017	286 aa		4.05	□□□□□ -1.76
HRT1	YOL133W	NAT1	P12945	854 aa	Known RBP	4.04	□□□□□ -1.76
HRT1	YOL133W	LDB16	P25587	256 aa		4.04	□□□□□ -1.76
HRT1	YOL133W	DPH2	P32461	534 aa		4.04	□□□□□ -1.76
HRT1	YOL133W	PTI1	P39927	425 aa	Predicted RBP	4.04	□□□□□ -1.76
HRT1	YOL133W	PAC11	P40960	533 aa		4.04	□□□□□ -1.76
HRT1	YOL133W	RTT102	P53330	157 aa		4.04	□□□□□ -1.76
HRT1	YOL133W	POM152	P39685	1337 aa		4.03	□□□□□ -1.76
HRT1	YOL133W	ATP1	P07251	545 aa	Known RBP	4.03	□□□□□ -1.76
HRT1	YOL133W	ADH5	P38113	351 aa	Known RBP	4.03	□□□□□ -1.76
HRT1	YOL133W	GPX2	P38143	162 aa		4.03	□□□□□ -1.76
HRT1	YOL133W	YSW1	P38280	609 aa		4.03	□□□□□ -1.76
HRT1	YOL133W	ASN2	P49090	572 aa	Known RBP	4.03	□□□□□ -1.76
HRT1	YOL133W	YIP5	P53108	310 aa		4.03	□□□□□ -1.76
HRT1	YOL133W	YLR152C	P54072	576 aa		4.03	□□□□□ -1.76
HRT1	YOL133W	TDA1	Q03533	586 aa		4.03	□□□□□ -1.76
HRT1	YOL133W	RCF1	Q03713	159 aa		4.03	□□□□□ -1.76
HRT1	YOL133W	YGK3	Q12222	375 aa	Predicted RBP	4.03	□□□□□ -1.76
HRT1	YOL133W	CEX1	Q12453	761 aa		4.03	□□□□□ -1.76
HRT1	YOL133W	PDE2	P06776	526 aa		4.02	□□□□□ -1.77
HRT1	YOL133W	MSI1	P13712	422 aa		4.02	□□□□□ -1.77
HRT1	YOL133W	ANR2	P36090	516 aa	Predicted RBP	4.02	□□□□□ -1.77
HRT1	YOL133W	MRPL4	P36517	319 aa		4.02	□□□□□ -1.77
HRT1	YOL133W	APE4	P38821	490 aa		4.02	□□□□□ -1.77
HRT1	YOL133W	COX14	P39103	70 aa		4.02	□□□□□ -1.77
HRT1	YOL133W	YIL029C	P40538	142 aa		4.02	□□□□□ -1.77
HRT1	YOL133W	BNS1	P50084	137 aa		4.02	□□□□□ -1.77
HRT1	YOL133W	SFG1	Q12507	346 aa		4.02	□□□□□ -1.77
HRT1	YOL133W	RNA1	P11745	407 aa	Known RBP	4.01	□□□□□ -1.77
HRT1	YOL133W	SKT5	P34226	696 aa		4.01	□□□□□ -1.77
HRT1	YOL133W	MCR1	P36060	302 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms