RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	ERG20	P08524	352 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	GCD2	P12754	651 aa	Predicted RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	RPS17B	P14127	136 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	RPS5	P26783	225 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
SKP2	YNL311C	YNK1	P36010	153 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	RRP14	P36080	434 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	AMN1	P38285	549 aa	Predicted RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	EFM1	P38732	585 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	LNP1	P38878	278 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	MEF2	P39677	819 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	MPH1	P40562	993 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	STB2	P46679	850 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	YDL186W	P48568	277 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	DAM1	P53267	343 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	ERG5	P54781	538 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	RUD3	Q12234	484 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	LAS17	Q12446	633 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	URA2	P07259	2214 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	ILV5	P06168	395 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	SEC53	P07283	254 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	ARF1	P11076	181 aa	Known RBP	2.61	□□□□□ -1.99
SKP2	YNL311C	YAK1	P14680	807 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	FES1	P38260	290 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	ERP5	P38819	212 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	SCC4	P40090	624 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	HOS4	P40480	1083 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	SKP1	P52286	194 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	BOL2	P53082	120 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	CLD1	P53264	445 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	SHY1	P53266	389 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	BUD32	P53323	261 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	NHP10	Q03435	203 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	RIM9	Q04734	239 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	YLR287C	Q05881	355 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	GRE1	Q08969	168 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	YDL180W	Q12301	547 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	YKL033W-A	Q86ZR7	236 aa		2.61	□□□□□ -1.99
SKP2	YNL311C	STE2	D6VTK4	431 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	GPH1	P06738	902 aa	Known RBP	2.6	□□□□□ -1.99
SKP2	YNL311C	YER190C-B	P0CX94	160 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	YEL077W-A	P0CX95	160 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	YGR296C-B	P0CX96	160 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	YPL283W-B	P0CX97	160 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	YPR204C-A	P0CX98	160 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	YFL068W	P0CX99	160 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	YLL066W-A	P0CY00	160 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	YLL067W-A	P0CY01	160 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	RAD51	P25454	400 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	ARE1	P25628	610 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	DAL80	P26343	269 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	CDC3	P32457	520 aa	Known RBP	2.6	□□□□□ -1.99
SKP2	YNL311C	CAK1	P43568	368 aa	Predicted RBP	2.6	□□□□□ -1.99
SKP2	YNL311C	MPA43	P53583	542 aa	Predicted RBP	2.6	□□□□□ -1.99
SKP2	YNL311C	YNR068C	P53754	272 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	RHO5	P53879	331 aa	Known RBP	2.6	□□□□□ -1.99
SKP2	YNL311C	YPL039W	Q03080	316 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	VMS1	Q04311	632 aa	Known RBP	2.6	□□□□□ -1.99
SKP2	YNL311C	PAL1	Q05518	499 aa	Known RBP	2.6	□□□□□ -1.99
SKP2	YNL311C	RIB2	Q12362	591 aa	Known RBP	2.6	□□□□□ -1.99
SKP2	YNL311C	RAX2	Q12465	1220 aa		2.6	□□□□□ -1.99
SKP2	YNL311C	TOP3	P13099	656 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	MSI1	P13712	422 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	SAN1	P22470	610 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	TRX3	P25372	127 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	PRE2	P30656	287 aa	Known RBP	2.59	□□□□□ -1.99
SKP2	YNL311C	RPD3	P32561	433 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	PTR2	P32901	601 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	ASK1	P35734	292 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	SEC28	P40509	296 aa	Known RBP	2.59	□□□□□ -1.99
SKP2	YNL311C	PSA1	P41940	361 aa	Known RBP	2.59	□□□□□ -1.99
SKP2	YNL311C	TAF6	P53040	516 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	FCY22	Q12119	530 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	NMD4	Q12129	218 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	YLR122C	Q12312	125 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	PSF1	Q12488	208 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	BPH1	P25356	2167 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	SUI3	P09064	285 aa	Known RBP	2.59	□□□□□ -1.99
SKP2	YNL311C	ROX1	P25042	368 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	URA10	P30402	227 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	HSP150	P32478	413 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	MNS1	P32906	549 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	AST2	P39945	430 aa	Known RBP	2.59	□□□□□ -1.99
SKP2	YNL311C	QDR2	P40474	542 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	YFL054C	P43549	646 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	PRP3	Q03338	469 aa	Predicted RBP	2.59	□□□□□ -1.99
SKP2	YNL311C	RAD30	Q04049	632 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	VAC14	Q06708	880 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	YOL029C	Q08187	201 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	GEP3	Q08622	556 aa		2.59	□□□□□ -1.99
SKP2	YNL311C	PET111	P08468	800 aa		2.58	□□□□□ -2
SKP2	YNL311C	GCD1	P09032	578 aa	Predicted RBP	2.58	□□□□□ -2
SKP2	YNL311C	TFS1	P14306	219 aa		2.58	□□□□□ -2
SKP2	YNL311C	FUN30	P31380	1131 aa		2.58	□□□□□ -2
SKP2	YNL311C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SKP2	YNL311C	AUR1	P36107	401 aa	Predicted RBP	2.58	□□□□□ -2
SKP2	YNL311C	SEC31	P38968	1273 aa	Known RBP	2.58	□□□□□ -2
SKP2	YNL311C	ECM10	P39987	644 aa		2.58	□□□□□ -2
SKP2	YNL311C	EGT2	P42835	1041 aa		2.58	□□□□□ -2
SKP2	YNL311C	ADO1	P47143	340 aa	Known RBP	2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 40 ms