RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W EXG1P23776 448 aaKnown RBP2.12□□□□□ -2.07
CTK3YML112W YCR051WP25631 222 aa2.12□□□□□ -2.07
CTK3YML112W CDC50P25656 391 aa2.12□□□□□ -2.07
CTK3YML112W EGT2P42835 1041 aa2.12□□□□□ -2.07
CTK3YML112W ATG18P43601 500 aa2.12□□□□□ -2.07
CTK3YML112W SRB7P47822 140 aa2.12□□□□□ -2.07
CTK3YML112W RRP46P53256 223 aaPredicted RBP2.12□□□□□ -2.07
CTK3YML112W CLD1P53264 445 aa2.12□□□□□ -2.07
CTK3YML112W KTR6P54070 446 aa2.12□□□□□ -2.07
CTK3YML112W YMR102CQ03177 834 aa2.12□□□□□ -2.07
CTK3YML112W HOT1Q03213 719 aa2.12□□□□□ -2.07
CTK3YML112W AIM32Q04689 311 aa2.12□□□□□ -2.07
CTK3YML112W DCS1Q06151 350 aa2.12□□□□□ -2.07
CTK3YML112W MCH1Q07376 486 aa2.12□□□□□ -2.07
CTK3YML112W DNL4Q08387 944 aaPredicted RBP2.12□□□□□ -2.07
CTK3YML112W IES4Q08561 116 aa2.12□□□□□ -2.07
CTK3YML112W SCM3Q12334 223 aa2.12□□□□□ -2.07
CTK3YML112W TY1B-AO13527 1196 aaKnown RBP2.11□□□□□ -2.07
CTK3YML112W CBP6P07253 162 aaPredicted RBP2.11□□□□□ -2.07
CTK3YML112W PRB1P09232 635 aa2.11□□□□□ -2.07
CTK3YML112W DPH5P32469 300 aaPredicted RBP2.11□□□□□ -2.07
CTK3YML112W NIP1P32497 812 aaKnown RBP2.11□□□□□ -2.07
CTK3YML112W COX13P32799 129 aa2.11□□□□□ -2.07
CTK3YML112W NFU1P32860 256 aa2.11□□□□□ -2.07
CTK3YML112W GPI18P38211 433 aa2.11□□□□□ -2.07
CTK3YML112W YHK8P38776 514 aa2.11□□□□□ -2.07
CTK3YML112W TIM17P39515 158 aa2.11□□□□□ -2.07
CTK3YML112W YNL208WP40159 199 aaKnown RBP2.11□□□□□ -2.07
CTK3YML112W LCB3P47013 409 aa2.11□□□□□ -2.07
CTK3YML112W MDM1Q01846 1127 aa2.11□□□□□ -2.07
CTK3YML112W STD1Q02794 444 aa2.11□□□□□ -2.07
CTK3YML112W YMR155WQ03795 547 aa2.11□□□□□ -2.07
CTK3YML112W NCA2Q12374 616 aa2.11□□□□□ -2.07
CTK3YML112W NAG1Q8TGN9 163 aa2.11□□□□□ -2.07
CTK3YML112W ISN1Q99312 450 aa2.11□□□□□ -2.07
CTK3YML112W ADH1P00330 348 aaKnown RBP2.1□□□□□ -2.07
CTK3YML112W ADE4P04046 510 aaKnown RBP2.1□□□□□ -2.07
CTK3YML112W CDC31P06704 161 aaKnown RBP2.1□□□□□ -2.07
CTK3YML112W IMA3P0CW40 589 aa2.1□□□□□ -2.07
CTK3YML112W IMA4P0CW41 589 aa2.1□□□□□ -2.07
CTK3YML112W CAP2P13517 287 aa2.1□□□□□ -2.07
CTK3YML112W ANR2P36090 516 aaPredicted RBP2.1□□□□□ -2.07
CTK3YML112W PTI1P39927 425 aaPredicted RBP2.1□□□□□ -2.07
CTK3YML112W YGR018CP53211 109 aa2.1□□□□□ -2.07
CTK3YML112W YPL107WQ02873 248 aa2.1□□□□□ -2.07
CTK3YML112W TDA1Q03533 586 aa2.1□□□□□ -2.07
CTK3YML112W SPC19Q03954 165 aa2.1□□□□□ -2.07
CTK3YML112W ROY1Q04847 553 aa2.1□□□□□ -2.07
CTK3YML112W IMA2Q08295 589 aa2.1□□□□□ -2.07
CTK3YML112W RRG1Q12167 365 aaPredicted RBP2.1□□□□□ -2.07
CTK3YML112W FOL3Q12676 427 aaPredicted RBP2.1□□□□□ -2.07
CTK3YML112W MTR10Q99189 972 aa2.1□□□□□ -2.07
CTK3YML112W AFI1Q99222 893 aa2.1□□□□□ -2.07
CTK3YML112W CYS4P32582 507 aaKnown RBP2.09□□□□□ -2.07
CTK3YML112W YKL097CP34245 136 aa2.09□□□□□ -2.07
CTK3YML112W BYE1P36106 594 aa2.09□□□□□ -2.07
CTK3YML112W YPS6P40583 537 aa2.09□□□□□ -2.07
CTK3YML112W TOS3P43637 560 aa2.09□□□□□ -2.07
CTK3YML112W AIP1P46680 615 aaKnown RBP2.09□□□□□ -2.07
CTK3YML112W PGU1P47180 361 aa2.09□□□□□ -2.07
CTK3YML112W YPS5P53057 165 aa2.09□□□□□ -2.07
CTK3YML112W OCA2P53949 197 aa2.09□□□□□ -2.07
CTK3YML112W YMR010WQ03687 405 aa2.09□□□□□ -2.07
CTK3YML112W ACL4Q03771 387 aa2.09□□□□□ -2.07
CTK3YML112W VPS54Q12071 889 aa2.09□□□□□ -2.07
CTK3YML112W RUP1Q12242 671 aa2.09□□□□□ -2.07
CTK3YML112W COX3P00420 269 aa2.08□□□□□ -2.08
CTK3YML112W ATP1P07251 545 aaKnown RBP2.08□□□□□ -2.08
CTK3YML112W DST1P07273 309 aa2.08□□□□□ -2.08
CTK3YML112W RAD5P32849 1169 aaPredicted RBP2.08□□□□□ -2.08
CTK3YML112W OLA1P38219 394 aaKnown RBP2.08□□□□□ -2.08
CTK3YML112W YER079WP40052 210 aaKnown RBP2.08□□□□□ -2.08
CTK3YML112W MMF1P40185 145 aaKnown RBP2.08□□□□□ -2.08
CTK3YML112W CHS6P40955 746 aa2.08□□□□□ -2.08
CTK3YML112W FLC3P53121 802 aa2.08□□□□□ -2.08
CTK3YML112W RPT4P53549 437 aaKnown RBP2.08□□□□□ -2.08
CTK3YML112W COS1P53822 381 aa2.08□□□□□ -2.08
CTK3YML112W YLR345WQ06137 509 aa2.08□□□□□ -2.08
CTK3YML112W AEP3Q12089 606 aa2.08□□□□□ -2.08
CTK3YML112W ZRC1P20107 442 aa2.07□□□□□ -2.08
CTK3YML112W ALD5P40047 520 aaKnown RBP2.07□□□□□ -2.08
CTK3YML112W SEC9P40357 651 aa2.07□□□□□ -2.08
CTK3YML112W CAK1P43568 368 aaPredicted RBP2.07□□□□□ -2.08
CTK3YML112W YGL262WP53054 175 aa2.07□□□□□ -2.08
CTK3YML112W PIB2P53191 635 aa2.07□□□□□ -2.08
CTK3YML112W YGR250CP53316 781 aaKnown RBP2.07□□□□□ -2.08
CTK3YML112W TRM112P53738 135 aaPredicted RBP2.07□□□□□ -2.08
CTK3YML112W TPS1Q00764 495 aaKnown RBP2.07□□□□□ -2.08
CTK3YML112W VPS72Q03388 795 aa2.07□□□□□ -2.08
CTK3YML112W RPN9Q04062 393 aaKnown RBP2.07□□□□□ -2.08
CTK3YML112W MFG1Q07684 458 aa2.07□□□□□ -2.08
CTK3YML112W HMS1Q12398 434 aa2.07□□□□□ -2.08
CTK3YML112W CDC21P06785 304 aa2.06□□□□□ -2.08
CTK3YML112W ARO3P14843 370 aaKnown RBP2.06□□□□□ -2.08
CTK3YML112W DEP1P31385 405 aa2.06□□□□□ -2.08
CTK3YML112W HSP104P31539 908 aaKnown RBP2.06□□□□□ -2.08
CTK3YML112W LSM5P40089 93 aaKnown RBP2.06□□□□□ -2.08
CTK3YML112W GAT2P40209 560 aa2.06□□□□□ -2.08
CTK3YML112W IGD1P43598 195 aa2.06□□□□□ -2.08
CTK3YML112W YIP5P53108 310 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms