RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W RFA1P22336 621 aaKnown RBP4.04□□□□□ -1.76
SEN1YLR430W YUR1P26725 428 aa4.04□□□□□ -1.76
SEN1YLR430W ACB1P31787 87 aa4.04□□□□□ -1.76
SEN1YLR430W YKL162CP36052 402 aa4.04□□□□□ -1.76
SEN1YLR430W APE3P37302 537 aaKnown RBP4.04□□□□□ -1.76
SEN1YLR430W RFC2P40348 353 aa4.04□□□□□ -1.76
SEN1YLR430W UFD1P53044 361 aa4.04□□□□□ -1.76
SEN1YLR430W ENT4Q07872 247 aa4.04□□□□□ -1.76
SEN1YLR430W RMD5Q12508 421 aa4.04□□□□□ -1.76
SEN1YLR430W VMA9Q3E7B6 73 aa4.04□□□□□ -1.76
SEN1YLR430W ALG7P07286 448 aa4.04□□□□□ -1.76
SEN1YLR430W RPL8AP17076 256 aaKnown RBP4.04□□□□□ -1.76
SEN1YLR430W GRR1P24814 1151 aa4.04□□□□□ -1.76
SEN1YLR430W BEM1P29366 551 aa4.04□□□□□ -1.76
SEN1YLR430W RPL8BP29453 256 aaKnown RBP4.04□□□□□ -1.76
SEN1YLR430W ATG8P38182 117 aaRIP-Chip data4.04□□□□□ -1.76not detected
SEN1YLR430W ATG12P38316 186 aa4.04□□□□□ -1.76
SEN1YLR430W CIT3P43635 486 aa4.04□□□□□ -1.76
SEN1YLR430W GUP1P53154 560 aa4.04□□□□□ -1.76
SEN1YLR430W NHX1Q04121 633 aa4.04□□□□□ -1.76
SEN1YLR430W YLR345WQ06137 509 aa4.04□□□□□ -1.76
SEN1YLR430W YLR413WQ06689 675 aa4.04□□□□□ -1.76
SEN1YLR430W REV1P12689 985 aa4.03□□□□□ -1.76
SEN1YLR430W URA6P15700 204 aa4.03□□□□□ -1.76
SEN1YLR430W COX11P19516 300 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W SUR1P33300 382 aa4.03□□□□□ -1.76
SEN1YLR430W POP8P38208 133 aa4.03□□□□□ -1.76
SEN1YLR430W FTH1P38310 465 aa4.03□□□□□ -1.76
SEN1YLR430W VAB2P40003 282 aa4.03□□□□□ -1.76
SEN1YLR430W PFA3P42836 336 aa4.03□□□□□ -1.76
SEN1YLR430W LOC1P43586 204 aaPredicted RBP4.03□□□□□ -1.76
SEN1YLR430W ATG18P43601 500 aa4.03□□□□□ -1.76
SEN1YLR430W AIM22P47051 409 aa4.03□□□□□ -1.76
SEN1YLR430W OST6Q03723 332 aa4.03□□□□□ -1.76
SEN1YLR430W GCY1P14065 312 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SEN1YLR430W ACO1P19414 778 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SEN1YLR430W DAL2P25335 343 aa4.03□□□□□ -1.76
SEN1YLR430W RPD3P32561 433 aa4.03□□□□□ -1.76
SEN1YLR430W FLR1P38124 548 aa4.03□□□□□ -1.76
SEN1YLR430W VPS70P47161 811 aa4.03□□□□□ -1.76
SEN1YLR430W MKC7P53379 596 aa4.03□□□□□ -1.76
SEN1YLR430W YNR029CP53729 429 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W INN1P53901 409 aa4.03□□□□□ -1.76
SEN1YLR430W YDR109CQ04585 715 aa4.03□□□□□ -1.76
SEN1YLR430W CDC123Q05791 360 aa4.03□□□□□ -1.76
SEN1YLR430W ISR1Q06098 443 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W AIM6Q07716 390 aa4.03□□□□□ -1.76
SEN1YLR430W INP54Q08227 384 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W YRF1-2P40105 1681 aa4.03□□□□□ -1.76
SEN1YLR430W MLP1Q02455 1875 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W PDX1P16451 410 aa4.03□□□□□ -1.76
SEN1YLR430W SEC59P20048 519 aa4.03□□□□□ -1.76
SEN1YLR430W PCM1P38628 557 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W HPA3P39979 161 aa4.03□□□□□ -1.76
SEN1YLR430W SLZ1P40167 298 aa4.03□□□□□ -1.76
SEN1YLR430W YIL108WP40483 696 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W YNL181WP53878 407 aa4.03□□□□□ -1.76
SEN1YLR430W SPR6Q01684 191 aa4.03□□□□□ -1.76
SEN1YLR430W KIN4Q01919 800 aa4.03□□□□□ -1.76
SEN1YLR430W PIB1Q06651 286 aa4.03□□□□□ -1.76
SEN1YLR430W YOL019WQ08157 551 aa4.03□□□□□ -1.76
SEN1YLR430W YOL159CQ08300 171 aa4.03□□□□□ -1.76
SEN1YLR430W FBP1P09201 348 aa4.03□□□□□ -1.76
SEN1YLR430W CKA1P15790 372 aa4.03□□□□□ -1.76
SEN1YLR430W PRE9P23638 258 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W DAL3P32459 195 aa4.03□□□□□ -1.76
SEN1YLR430W PCS60P38137 543 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SEN1YLR430W ALG11P53954 548 aaKnown RBP4.03□□□□□ -1.76
SEN1YLR430W TIM8P57744 87 aa4.03□□□□□ -1.76
SEN1YLR430W GIS3Q12418 502 aa4.03□□□□□ -1.76
SEN1YLR430W YBL029C-AQ3E756 94 aa4.03□□□□□ -1.76
SEN1YLR430W PRC1P00729 532 aa4.03□□□□□ -1.76
SEN1YLR430W MDH1P17505 334 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SEN1YLR430W URA10P30402 227 aa4.03□□□□□ -1.76
SEN1YLR430W ROG1P53118 685 aa4.03□□□□□ -1.76
SEN1YLR430W YLR455WQ06188 304 aa4.03□□□□□ -1.76
SEN1YLR430W CDC20P26309 610 aa4.02□□□□□ -1.77
SEN1YLR430W SRO77P38163 1010 aa4.02□□□□□ -1.77
SEN1YLR430W ACO2P39533 789 aa4.02□□□□□ -1.77
SEN1YLR430W YIL166CP40445 542 aa4.02□□□□□ -1.77
SEN1YLR430W COQ6P53318 479 aa4.02□□□□□ -1.77
SEN1YLR430W REG1Q00816 1014 aa4.02□□□□□ -1.77
SEN1YLR430W MRP51Q02950 344 aa4.02□□□□□ -1.77
SEN1YLR430W YDR090CQ03193 310 aa4.02□□□□□ -1.77
SEN1YLR430W SSK1Q07084 712 aa4.02□□□□□ -1.77
SEN1YLR430W YOL131WQ08270 108 aa4.02□□□□□ -1.77
SEN1YLR430W RRG7Q08774 242 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W MHF2Q3E829 80 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-HO13535 1793 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-DR5P0C2I2 1755 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-DR6P0C2I3 1755 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-LR2P0C2I5 1755 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-LR3P0C2I6 1755 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W TY1B-PR1P0C2I9 1755 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W TY1B-PR2P0C2J0 1756 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-PR3P0C2J1 1755 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W TY1B-JR1P47098 1755 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-ML2Q03434 1755 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W TY1B-ER1Q03612 1755 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-ML1Q04711 1755 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms