RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C NOP12Q08208 459 aaKnown RBP1.92□□□□□ -2.1
RTT101YJL047C YOR365CQ08844 703 aa1.92□□□□□ -2.1
RTT101YJL047C YDR215CQ12240 137 aa1.92□□□□□ -2.1
RTT101YJL047C YPR1Q12458 312 aa1.92□□□□□ -2.1
RTT101YJL047C ATP1P07251 545 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C RPL12AP0CX53 165 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C RPL12BP0CX54 165 aa1.91□□□□□ -2.1
RTT101YJL047C MATALPHA2P0CY08 210 aa1.91□□□□□ -2.1
RTT101YJL047C HMLALPHA2P0CY09 210 aa1.91□□□□□ -2.1
RTT101YJL047C NHP6BP11633 99 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C ZRC1P20107 442 aa1.91□□□□□ -2.1
RTT101YJL047C MSB1P21339 1137 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C RNR3P21672 869 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C MSK1P32048 576 aa1.91□□□□□ -2.1
RTT101YJL047C ZUO1P32527 433 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C CYS4P32582 507 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C HIS7P33734 552 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C SKT5P34226 696 aa1.91□□□□□ -2.1
RTT101YJL047C DSN1P40568 576 aa1.91□□□□□ -2.1
RTT101YJL047C BUL1P48524 976 aa1.91□□□□□ -2.1
RTT101YJL047C UBP8P50102 471 aa1.91□□□□□ -2.1
RTT101YJL047C PYK2P52489 506 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C COG2P53271 262 aa1.91□□□□□ -2.1
RTT101YJL047C ZPR1P53303 486 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C NRD1P53617 575 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
RTT101YJL047C YNR014WP53719 212 aa1.91□□□□□ -2.1
RTT101YJL047C TRM112P53738 135 aaPredicted RBP1.91□□□□□ -2.1
RTT101YJL047C ATG4P53867 494 aa1.91□□□□□ -2.1
RTT101YJL047C EAF7P53911 425 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C APM1Q00776 475 aaPredicted RBP1.91□□□□□ -2.1
RTT101YJL047C PFA5Q03289 374 aa1.91□□□□□ -2.1
RTT101YJL047C NUP53Q03790 475 aa1.91□□□□□ -2.1
RTT101YJL047C COQ11Q05892 277 aa1.91□□□□□ -2.1
RTT101YJL047C YLR224WQ05947 369 aa1.91□□□□□ -2.1
RTT101YJL047C RAD34Q06665 692 aa1.91□□□□□ -2.1
RTT101YJL047C PAM18Q07914 168 aa1.91□□□□□ -2.1
RTT101YJL047C DSE3Q08729 430 aa1.91□□□□□ -2.1
RTT101YJL047C FSH3Q99369 266 aa1.91□□□□□ -2.1
RTT101YJL047C MES1P00958 751 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C GAL4P04386 881 aa1.91□□□□□ -2.1
RTT101YJL047C TCP1P12612 559 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C CKI1P20485 582 aa1.91□□□□□ -2.1
RTT101YJL047C YSR3P23501 404 aa1.91□□□□□ -2.1
RTT101YJL047C RRT12P25381 491 aa1.91□□□□□ -2.1
RTT101YJL047C PRR1P28708 518 aa1.91□□□□□ -2.1
RTT101YJL047C PEX3P28795 441 aa1.91□□□□□ -2.1
RTT101YJL047C GCG1P32656 232 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C SKG6P32900 734 aaPredicted RBP1.91□□□□□ -2.1
RTT101YJL047C SPT10P35208 640 aa1.91□□□□□ -2.1
RTT101YJL047C CBT1P36038 271 aaPredicted RBP1.91□□□□□ -2.1
RTT101YJL047C RIB1P38066 345 aa1.91□□□□□ -2.1
RTT101YJL047C BNA4P38169 460 aa1.91□□□□□ -2.1
RTT101YJL047C YMR262WP38430 313 aa1.91□□□□□ -2.1
RTT101YJL047C PFS1P38872 237 aa1.91□□□□□ -2.1
RTT101YJL047C PCL6P40038 420 aa1.91□□□□□ -2.1
RTT101YJL047C RFC4P40339 323 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C YIR016WP40572 265 aa1.91□□□□□ -2.1
RTT101YJL047C ERG10P41338 398 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C SCD6P45978 349 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1 RIP-Chip
RTT101YJL047C GLG2P47011 380 aa1.91□□□□□ -2.1
RTT101YJL047C YJR011CP47086 261 aaPredicted RBP1.91□□□□□ -2.1
RTT101YJL047C SPT20P50875 604 aa1.91□□□□□ -2.1
RTT101YJL047C KAP114P53067 1004 aa1.91□□□□□ -2.1
RTT101YJL047C YGR067CP53243 804 aa1.91□□□□□ -2.1
RTT101YJL047C BIO4P53630 237 aa1.91□□□□□ -2.1
RTT101YJL047C YPL068CQ02749 293 aa1.91□□□□□ -2.1
RTT101YJL047C MMT1Q03218 510 aa1.91□□□□□ -2.1
RTT101YJL047C RIM13Q03792 727 aa1.91□□□□□ -2.1
RTT101YJL047C BUR2Q05949 395 aa1.91□□□□□ -2.1
RTT101YJL047C GGA1Q06336 557 aa1.91□□□□□ -2.1
RTT101YJL047C CDD1Q06549 142 aa1.91□□□□□ -2.1
RTT101YJL047C MCA1Q08601 432 aa1.91□□□□□ -2.1
RTT101YJL047C GLT1Q12680 2145 aaKnown RBP1.91□□□□□ -2.1
RTT101YJL047C RPP2AP05319 106 aaKnown RBP1.9□□□□□ -2.1
RTT101YJL047C MET3P08536 511 aa1.9□□□□□ -2.1
RTT101YJL047C TKL1P23254 680 aaKnown RBP1.9□□□□□ -2.1
RTT101YJL047C PPA2P28239 310 aa1.9□□□□□ -2.1
RTT101YJL047C PRP18P33411 251 aaPredicted RBP1.9□□□□□ -2.1
RTT101YJL047C DOA1P36037 715 aa1.9□□□□□ -2.1
RTT101YJL047C MTW1P39731 289 aa1.9□□□□□ -2.1
RTT101YJL047C LCP5P40079 357 aaPredicted RBP1.9□□□□□ -2.1
RTT101YJL047C COA1P40452 197 aa1.9□□□□□ -2.1
RTT101YJL047C UTP25P40498 721 aaKnown RBP1.9□□□□□ -2.1
RTT101YJL047C YGR210CP42942 411 aa1.9□□□□□ -2.1
RTT101YJL047C TRS85P46944 698 aa1.9□□□□□ -2.1
RTT101YJL047C YJL163CP46996 555 aa1.9□□□□□ -2.1
RTT101YJL047C LIF1P53150 421 aa1.9□□□□□ -2.1
RTT101YJL047C YGR168CP53293 376 aa1.9□□□□□ -2.1
RTT101YJL047C SLI1P53304 468 aa1.9□□□□□ -2.1
RTT101YJL047C NUP116Q02630 1113 aa1.9□□□□□ -2.1
RTT101YJL047C GIP3Q03016 1276 aa1.9□□□□□ -2.1
RTT101YJL047C YMR209CQ03648 457 aa1.9□□□□□ -2.1
RTT101YJL047C CDC123Q05791 360 aa1.9□□□□□ -2.1
RTT101YJL047C ACK1Q07622 623 aaPredicted RBP1.9□□□□□ -2.1
RTT101YJL047C SDO1Q07953 250 aaKnown RBP1.9□□□□□ -2.1
RTT101YJL047C BRX1Q08235 291 aaKnown RBP1.9□□□□□ -2.1
RTT101YJL047C THI72Q08579 599 aa1.9□□□□□ -2.1
RTT101YJL047C SRO7Q12038 1033 aa1.9□□□□□ -2.1
RTT101YJL047C MSH5Q12175 901 aa1.9□□□□□ -2.1
RTT101YJL047C YLR122CQ12312 125 aa1.9□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms