RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W ATP1P07251 545 aaKnown RBP3.39□□□□□ -1.87
PRP18YGR006W NFT1P0CE68 1218 aa3.39□□□□□ -1.87
PRP18YGR006W PET123P17558 318 aa3.39□□□□□ -1.87
PRP18YGR006W COX13P32799 129 aa3.39□□□□□ -1.87
PRP18YGR006W SKN1P33336 771 aa3.39□□□□□ -1.87
PRP18YGR006W RXT2P38255 430 aa3.39□□□□□ -1.87
PRP18YGR006W COX14P39103 70 aa3.39□□□□□ -1.87
PRP18YGR006W TOS3P43637 560 aa3.39□□□□□ -1.87
PRP18YGR006W MLC1P53141 149 aa3.39□□□□□ -1.87
PRP18YGR006W PRP3Q03338 469 aaPredicted RBP3.39□□□□□ -1.87
PRP18YGR006W TMS1Q12116 473 aa3.39□□□□□ -1.87
PRP18YGR006W RPL6BP05739 176 aaKnown RBP3.38□□□□□ -1.87
PRP18YGR006W SLM5P25345 492 aaKnown RBP3.38□□□□□ -1.87
PRP18YGR006W POP5P28005 173 aa3.38□□□□□ -1.87
PRP18YGR006W KAR9P32526 644 aa3.38□□□□□ -1.87
PRP18YGR006W QDR3P38227 689 aa3.38□□□□□ -1.87
PRP18YGR006W PFF1P38244 976 aa3.38□□□□□ -1.87
PRP18YGR006W STP2P38704 541 aa3.38□□□□□ -1.87
PRP18YGR006W SIM1P40472 476 aa3.38□□□□□ -1.87
PRP18YGR006W YIL029CP40538 142 aa3.38□□□□□ -1.87
PRP18YGR006W CHS6P40955 746 aa3.38□□□□□ -1.87
PRP18YGR006W ASN2P49090 572 aaKnown RBP3.38□□□□□ -1.87
PRP18YGR006W RPL6AQ02326 176 aaKnown RBP3.38□□□□□ -1.87
PRP18YGR006W YRM1Q12340 786 aa3.38□□□□□ -1.87
PRP18YGR006W SRN2Q99176 213 aa3.38□□□□□ -1.87
PRP18YGR006W CYC3P06182 269 aa3.37□□□□□ -1.87
PRP18YGR006W KAP104P38217 918 aaKnown RBP3.37□□□□□ -1.87
PRP18YGR006W MSG5P38590 489 aa3.37□□□□□ -1.87
PRP18YGR006W WSS1P38838 269 aa3.37□□□□□ -1.87
PRP18YGR006W MLH1P38920 769 aa3.37□□□□□ -1.87
PRP18YGR006W PAN6P40459 309 aa3.37□□□□□ -1.87
PRP18YGR006W MDE1P47095 244 aa3.37□□□□□ -1.87
PRP18YGR006W ALF1P53904 254 aa3.37□□□□□ -1.87
PRP18YGR006W EOS1P53938 366 aa3.37□□□□□ -1.87
PRP18YGR006W MTQ1P53944 314 aa3.37□□□□□ -1.87
PRP18YGR006W MEH1Q02205 184 aa3.37□□□□□ -1.87
PRP18YGR006W MDM36Q06820 579 aa3.37□□□□□ -1.87
PRP18YGR006W SKS1Q12505 502 aa3.37□□□□□ -1.87
PRP18YGR006W CAP2P13517 287 aa3.36□□□□□ -1.87
PRP18YGR006W EXG1P23776 448 aaKnown RBP3.36□□□□□ -1.87
PRP18YGR006W PHA2P32452 334 aa3.36□□□□□ -1.87
PRP18YGR006W SWI3P32591 825 aa3.36□□□□□ -1.87
PRP18YGR006W YSC83P32792 385 aa3.36□□□□□ -1.87
PRP18YGR006W SKT5P34226 696 aa3.36□□□□□ -1.87
PRP18YGR006W DOA1P36037 715 aa3.36□□□□□ -1.87
PRP18YGR006W MRPL4P36517 319 aa3.36□□□□□ -1.87
PRP18YGR006W EPL1P43572 832 aa3.36□□□□□ -1.87
PRP18YGR006W STE24P47154 453 aa3.36□□□□□ -1.87
PRP18YGR006W NUP116Q02630 1113 aa3.36□□□□□ -1.87
PRP18YGR006W IPK1Q06667 281 aa3.36□□□□□ -1.87
PRP18YGR006W MRPL35Q06678 367 aa3.36□□□□□ -1.87
PRP18YGR006W AAD15Q08361 143 aa3.36□□□□□ -1.87
PRP18YGR006W YDR061WQ12298 539 aa3.36□□□□□ -1.87
PRP18YGR006W RNH203Q12338 110 aa3.36□□□□□ -1.87
PRP18YGR006W POM152P39685 1337 aa3.36□□□□□ -1.87
PRP18YGR006W PAB1P04147 577 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
PRP18YGR006W RPS8AP0CX39 200 aaKnown RBP3.35□□□□□ -1.87
PRP18YGR006W RPS8BP0CX40 200 aaKnown RBP3.35□□□□□ -1.87
PRP18YGR006W RPL12AP0CX53 165 aaKnown RBP3.35□□□□□ -1.87
PRP18YGR006W RPL12BP0CX54 165 aa3.35□□□□□ -1.87
PRP18YGR006W ARF1P11076 181 aaKnown RBP3.35□□□□□ -1.87
PRP18YGR006W YEF1P32622 495 aa3.35□□□□□ -1.87
PRP18YGR006W SBE22P38814 852 aa3.35□□□□□ -1.87
PRP18YGR006W APE4P38821 490 aa3.35□□□□□ -1.87
PRP18YGR006W MNL1P38888 796 aa3.35□□□□□ -1.87
PRP18YGR006W ATM1P40416 690 aa3.35□□□□□ -1.87
PRP18YGR006W RRP46P53256 223 aaPredicted RBP3.35□□□□□ -1.87
PRP18YGR006W YGR117CP53270 476 aa3.35□□□□□ -1.87
PRP18YGR006W RTT102P53330 157 aa3.35□□□□□ -1.87
PRP18YGR006W SPR6Q01684 191 aa3.35□□□□□ -1.87
PRP18YGR006W URC2Q04411 772 aa3.35□□□□□ -1.87
PRP18YGR006W PAL1Q05518 499 aaKnown RBP3.35□□□□□ -1.87
PRP18YGR006W ECM7Q06200 448 aa3.35□□□□□ -1.87
PRP18YGR006W YFH1Q07540 174 aa3.35□□□□□ -1.87
PRP18YGR006W IRC25Q07951 179 aa3.35□□□□□ -1.87
PRP18YGR006W RRG7Q08774 242 aaPredicted RBP3.35□□□□□ -1.87
PRP18YGR006W NAM2P11325 894 aa3.34□□□□□ -1.87
PRP18YGR006W YKL097CP34245 136 aa3.34□□□□□ -1.87
PRP18YGR006W DAD2P36162 133 aa3.34□□□□□ -1.87
PRP18YGR006W MRM2P53123 320 aa3.34□□□□□ -1.87
PRP18YGR006W LOT6Q07923 191 aa3.34□□□□□ -1.87
PRP18YGR006W FDH1Q08911 376 aa3.34□□□□□ -1.87
PRP18YGR006W OPI3P05375 206 aa3.33□□□□□ -1.88
PRP18YGR006W TPK3P05986 398 aa3.33□□□□□ -1.88
PRP18YGR006W MSP1P28737 362 aa3.33□□□□□ -1.88
PRP18YGR006W YBL028CP38202 106 aa3.33□□□□□ -1.88
PRP18YGR006W MAM33P40513 266 aa3.33□□□□□ -1.88
PRP18YGR006W PMT5P52867 743 aa3.33□□□□□ -1.88
PRP18YGR006W YIP5P53108 310 aa3.33□□□□□ -1.88
PRP18YGR006W YMR102CQ03177 834 aa3.33□□□□□ -1.88
PRP18YGR006W PRM6Q04705 352 aa3.33□□□□□ -1.88
PRP18YGR006W SMC5Q08204 1093 aa3.33□□□□□ -1.88
PRP18YGR006W YGK3Q12222 375 aaPredicted RBP3.33□□□□□ -1.88
PRP18YGR006W YOP1Q12402 180 aa3.33□□□□□ -1.88
PRP18YGR006W EAF3Q12432 401 aa3.33□□□□□ -1.88
PRP18YGR006W TFB5Q3E7C1 72 aaPredicted RBP3.33□□□□□ -1.88
PRP18YGR006W CLN3P13365 580 aa3.32□□□□□ -1.88
PRP18YGR006W ISY1P21374 235 aaPredicted RBP3.32□□□□□ -1.88
PRP18YGR006W RVS161P25343 265 aaKnown RBP3.32□□□□□ -1.88
PRP18YGR006W YEL045CP32616 141 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms