RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	TRM5	P38793	499 aa		3.81	□□□□□ -1.8
SPI1	YER150W	LNP1	P38878	278 aa		3.81	□□□□□ -1.8
SPI1	YER150W	SRP14	P38985	146 aa		3.81	□□□□□ -1.8
SPI1	YER150W	YER137C	P40083	148 aa	Known RBP	3.81	□□□□□ -1.8
SPI1	YER150W	YKE4	P40544	346 aa		3.81	□□□□□ -1.8
SPI1	YER150W	MDV1	P47025	714 aa		3.81	□□□□□ -1.8
SPI1	YER150W	BNA3	P47039	444 aa	Known RBP	3.81	□□□□□ -1.8
SPI1	YER150W	RPC17	P47076	161 aa		3.81	□□□□□ -1.8
SPI1	YER150W	YJR056C	P47115	236 aa		3.81	□□□□□ -1.8
SPI1	YER150W	STB4	P50104	949 aa		3.81	□□□□□ -1.8
SPI1	YER150W	CWC23	P52868	283 aa	Predicted RBP	3.81	□□□□□ -1.8
SPI1	YER150W	IMO32	P53219	342 aa		3.81	□□□□□ -1.8
SPI1	YER150W	COX18	P53239	316 aa		3.81	□□□□□ -1.8
SPI1	YER150W	CUZ1	P53899	274 aa		3.81	□□□□□ -1.8
SPI1	YER150W	FYV6	P53913	173 aa		3.81	□□□□□ -1.8
SPI1	YER150W	MTQ1	P53944	314 aa		3.81	□□□□□ -1.8
SPI1	YER150W	YAT1	P80235	687 aa		3.81	□□□□□ -1.8
SPI1	YER150W	SDH1	Q00711	640 aa		3.81	□□□□□ -1.8
SPI1	YER150W	MMT1	Q03218	510 aa		3.81	□□□□□ -1.8
SPI1	YER150W	SLD5	Q03406	294 aa		3.81	□□□□□ -1.8
SPI1	YER150W	SSY1	Q03770	852 aa		3.81	□□□□□ -1.8
SPI1	YER150W	YMR160W	Q03823	816 aa		3.81	□□□□□ -1.8
SPI1	YER150W	ADH6	Q04894	360 aa	Known RBP	3.81	□□□□□ -1.8
SPI1	YER150W	ASM4	Q05166	528 aa		3.81	□□□□□ -1.8
SPI1	YER150W	POS5	Q06892	414 aa		3.81	□□□□□ -1.8
SPI1	YER150W	TPO1	Q07824	586 aa		3.81	□□□□□ -1.8
SPI1	YER150W	AAD15	Q08361	143 aa		3.81	□□□□□ -1.8
SPI1	YER150W	FRE5	Q08908	694 aa		3.81	□□□□□ -1.8
SPI1	YER150W	POM34	Q12445	299 aa		3.81	□□□□□ -1.8
SPI1	YER150W	YPR1	Q12458	312 aa		3.81	□□□□□ -1.8
SPI1	YER150W	YBR255C-A	Q3E776	120 aa		3.81	□□□□□ -1.8
SPI1	YER150W	ADH2	P00331	348 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	PGK1	P00560	416 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	ATP1	P07251	545 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	YLL053C	P0CD98	152 aa		3.8	□□□□□ -1.8
SPI1	YER150W	PDC5	P16467	563 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	HPR1	P17629	752 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	PDE1	P22434	369 aa		3.8	□□□□□ -1.8
SPI1	YER150W	DBR1	P24309	405 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	CHA1	P25379	360 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	PUP3	P25451	205 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
SPI1	YER150W	VPH2	P32341	215 aa		3.8	□□□□□ -1.8
SPI1	YER150W	YPK3	P38070	525 aa		3.8	□□□□□ -1.8
SPI1	YER150W	DUG2	P38149	878 aa		3.8	□□□□□ -1.8
SPI1	YER150W	IMD2	P38697	523 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	PTC7	P38797	343 aa		3.8	□□□□□ -1.8
SPI1	YER150W	YHR078W	P38799	552 aa		3.8	□□□□□ -1.8
SPI1	YER150W	EDC3	P39998	551 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	YNL195C	P40168	261 aa		3.8	□□□□□ -1.8
SPI1	YER150W	YNL194C	P40169	301 aa		3.8	□□□□□ -1.8
SPI1	YER150W	TAX4	P47030	604 aa		3.8	□□□□□ -1.8
SPI1	YER150W	YJR154W	P47181	346 aa		3.8	□□□□□ -1.8
SPI1	YER150W	YDL186W	P48568	277 aa		3.8	□□□□□ -1.8
SPI1	YER150W	NSA1	P53136	463 aa	Predicted RBP	3.8	□□□□□ -1.8
SPI1	YER150W	PKP2	P53170	491 aa		3.8	□□□□□ -1.8
SPI1	YER150W	IST1	P53843	298 aa	Predicted RBP	3.8	□□□□□ -1.8
SPI1	YER150W	YNL140C	P53910	189 aa		3.8	□□□□□ -1.8
SPI1	YER150W	ALG11	P53954	548 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	PRP38	Q00723	242 aa	Predicted RBP	3.8	□□□□□ -1.8
SPI1	YER150W	APM1	Q00776	475 aa	Predicted RBP	3.8	□□□□□ -1.8
SPI1	YER150W	RMI1	Q02685	241 aa		3.8	□□□□□ -1.8
SPI1	YER150W	USA1	Q03714	838 aa		3.8	□□□□□ -1.8
SPI1	YER150W	RIM13	Q03792	727 aa		3.8	□□□□□ -1.8
SPI1	YER150W	RVB1	Q03940	463 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	BUR2	Q05949	395 aa		3.8	□□□□□ -1.8
SPI1	YER150W	MCM21	Q06675	368 aa		3.8	□□□□□ -1.8
SPI1	YER150W	AFT2	Q08957	416 aa		3.8	□□□□□ -1.8
SPI1	YER150W	PRS5	Q12265	496 aa	Known RBP	3.8	□□□□□ -1.8
SPI1	YER150W	PNS1	Q12412	539 aa		3.8	□□□□□ -1.8
SPI1	YER150W	ZPS1	Q12512	249 aa		3.8	□□□□□ -1.8
SPI1	YER150W	YKL183C-A	Q3E765	70 aa		3.8	□□□□□ -1.8
SPI1	YER150W	YPR053C	Q6Q5F3	151 aa		3.8	□□□□□ -1.8
SPI1	YER150W	YCL012C	Q8J0M4	134 aa		3.8	□□□□□ -1.8
SPI1	YER150W	HIS5	P07172	385 aa		3.79	□□□□□ -1.8
SPI1	YER150W	MRP1	P10662	321 aa	Known RBP	3.79	□□□□□ -1.8
SPI1	YER150W	POX1	P13711	748 aa		3.79	□□□□□ -1.8
SPI1	YER150W	CBS2	P14905	389 aa		3.79	□□□□□ -1.8
SPI1	YER150W	TUP1	P16649	713 aa		3.79	□□□□□ -1.8
SPI1	YER150W	YMR31	P19955	123 aa		3.79	□□□□□ -1.8
SPI1	YER150W	RPO26	P20435	155 aa		3.79	□□□□□ -1.8
SPI1	YER150W	RFA2	P26754	273 aa	Known RBP	3.79	□□□□□ -1.8
SPI1	YER150W	NDC1	P32500	655 aa		3.79	□□□□□ -1.8
SPI1	YER150W	DSS4	P32601	143 aa		3.79	□□□□□ -1.8
SPI1	YER150W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.79	□□□□□ -1.8	not detected
SPI1	YER150W	CDC13	P32797	924 aa	Known RBP	3.79	□□□□□ -1.8
SPI1	YER150W	PDR3	P33200	976 aa		3.79	□□□□□ -1.8
SPI1	YER150W	TAF14	P35189	244 aa		3.79	□□□□□ -1.8
SPI1	YER150W	MRPL7	P36519	292 aa		3.79	□□□□□ -1.8
SPI1	YER150W	YBR259W	P38338	688 aa		3.79	□□□□□ -1.8
SPI1	YER150W	HIS2	P38635	335 aa		3.79	□□□□□ -1.8
SPI1	YER150W	ARO9	P38840	513 aa	Predicted RBP	3.79	□□□□□ -1.8
SPI1	YER150W	GPI16	P38875	610 aa		3.79	□□□□□ -1.8
SPI1	YER150W	CTF8	P38877	133 aa		3.79	□□□□□ -1.8
SPI1	YER150W	CEM1	P39525	442 aa		3.79	□□□□□ -1.8
SPI1	YER150W	UIP3	P39547	235 aa		3.79	□□□□□ -1.8
SPI1	YER150W	SEO1	P39709	593 aa		3.79	□□□□□ -1.8
SPI1	YER150W	FRT2	P39734	528 aa		3.79	□□□□□ -1.8
SPI1	YER150W	SNL1	P40548	159 aa		3.79	□□□□□ -1.8
SPI1	YER150W	IRC24	P40580	263 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms