RNA–Protein interactions for RNA: YDR540C

IRC4, Transcript of Putative protein of unknown function, yeastyeast

Gene IRC4, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC4YDR540C GPI16P38875 610 aa2.19□□□□□ -2.06
IRC4YDR540C SDT1P53078 280 aa2.19□□□□□ -2.06
IRC4YDR540C MHR1Q06630 226 aa2.19□□□□□ -2.06
IRC4YDR540C MDM36Q06820 579 aa2.19□□□□□ -2.06
IRC4YDR540C DCI1Q08558 271 aa2.19□□□□□ -2.06
IRC4YDR540C DST1P07273 309 aa2.18□□□□□ -2.06
IRC4YDR540C RVS161P25343 265 aaKnown RBP2.18□□□□□ -2.06
IRC4YDR540C PHA2P32452 334 aa2.18□□□□□ -2.06
IRC4YDR540C VPH1P32563 840 aaKnown RBP2.18□□□□□ -2.06
IRC4YDR540C ANP1P32629 500 aa2.18□□□□□ -2.06
IRC4YDR540C YKL097CP34245 136 aa2.18□□□□□ -2.06
IRC4YDR540C DED81P38707 554 aaKnown RBP2.18□□□□□ -2.06
IRC4YDR540C INM1P38710 295 aa2.18□□□□□ -2.06
IRC4YDR540C SBE22P38814 852 aa2.18□□□□□ -2.06
IRC4YDR540C MDE1P47095 244 aa2.18□□□□□ -2.06
IRC4YDR540C BRO1P48582 844 aa2.18□□□□□ -2.06
IRC4YDR540C GPI8P49018 411 aa2.18□□□□□ -2.06
IRC4YDR540C ATP22P50273 684 aaPredicted RBP2.18□□□□□ -2.06
IRC4YDR540C COS1P53822 381 aa2.18□□□□□ -2.06
IRC4YDR540C VPS9P54787 451 aa2.18□□□□□ -2.06
IRC4YDR540C PRP3Q03338 469 aaPredicted RBP2.18□□□□□ -2.06
IRC4YDR540C NDL1Q06568 189 aa2.18□□□□□ -2.06
IRC4YDR540C NSE1Q07913 336 aa2.18□□□□□ -2.06
IRC4YDR540C IRC25Q07951 179 aa2.18□□□□□ -2.06
IRC4YDR540C TMC1Q08422 150 aaPredicted RBP2.18□□□□□ -2.06
IRC4YDR540C SPE3Q12074 293 aaKnown RBP2.18□□□□□ -2.06
IRC4YDR540C RPN5Q12250 445 aaKnown RBP2.18□□□□□ -2.06
IRC4YDR540C YRM1Q12340 786 aa2.18□□□□□ -2.06
IRC4YDR540C NCA2Q12374 616 aa2.18□□□□□ -2.06
IRC4YDR540C CDC21P06785 304 aa2.17□□□□□ -2.06
IRC4YDR540C CAP2P13517 287 aa2.17□□□□□ -2.06
IRC4YDR540C ALG1P16661 449 aa2.17□□□□□ -2.06
IRC4YDR540C RIM1P32445 135 aaKnown RBP2.17□□□□□ -2.06
IRC4YDR540C CSE2P33308 149 aa2.17□□□□□ -2.06
IRC4YDR540C ATP3P38077 311 aaKnown RBP2.17□□□□□ -2.06
IRC4YDR540C APE4P38821 490 aa2.17□□□□□ -2.06
IRC4YDR540C COX14P39103 70 aa2.17□□□□□ -2.06
IRC4YDR540C YER079WP40052 210 aaKnown RBP2.17□□□□□ -2.06
IRC4YDR540C YIL029CP40538 142 aa2.17□□□□□ -2.06
IRC4YDR540C LCB2P40970 561 aa2.17□□□□□ -2.06
IRC4YDR540C TOS3P43637 560 aa2.17□□□□□ -2.06
IRC4YDR540C YJR085CP47131 105 aaKnown RBP2.17□□□□□ -2.06
IRC4YDR540C YLR152CP54072 576 aa2.17□□□□□ -2.06
IRC4YDR540C NUP116Q02630 1113 aa2.17□□□□□ -2.06
IRC4YDR540C PEX25Q02969 394 aa2.17□□□□□ -2.06
IRC4YDR540C CCE1Q03702 353 aa2.17□□□□□ -2.06
IRC4YDR540C GYL1Q04322 720 aa2.17□□□□□ -2.06
IRC4YDR540C PAL1Q05518 499 aaKnown RBP2.17□□□□□ -2.06
IRC4YDR540C RNH203Q12338 110 aa2.17□□□□□ -2.06
IRC4YDR540C CEX1Q12453 761 aa2.17□□□□□ -2.06
IRC4YDR540C PAB1P04147 577 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
IRC4YDR540C EXG1P23776 448 aaKnown RBP2.16□□□□□ -2.06
IRC4YDR540C DPH5P32469 300 aaPredicted RBP2.16□□□□□ -2.06
IRC4YDR540C SKN1P33336 771 aa2.16□□□□□ -2.06
IRC4YDR540C QDR3P38227 689 aa2.16□□□□□ -2.06
IRC4YDR540C RXT2P38255 430 aa2.16□□□□□ -2.06
IRC4YDR540C CAJ1P39101 391 aa2.16□□□□□ -2.06
IRC4YDR540C MMF1P40185 145 aaKnown RBP2.16□□□□□ -2.06
IRC4YDR540C MEP1P40260 492 aa2.16□□□□□ -2.06
IRC4YDR540C EFM4P40516 257 aa2.16□□□□□ -2.06
IRC4YDR540C YJL055WP47044 245 aa2.16□□□□□ -2.06
IRC4YDR540C TIS11P47977 285 aa2.16□□□□□ -2.06
IRC4YDR540C TOS2P50078 622 aa2.16□□□□□ -2.06
IRC4YDR540C YGL039WP53183 348 aaKnown RBP2.16□□□□□ -2.06
IRC4YDR540C MTQ1P53944 314 aa2.16□□□□□ -2.06
IRC4YDR540C YDR541CQ03049 344 aa2.16□□□□□ -2.06
IRC4YDR540C YMR027WQ04371 470 aa2.16□□□□□ -2.06
IRC4YDR540C NDE2Q07500 545 aa2.16□□□□□ -2.06
IRC4YDR540C PLP2Q12017 286 aa2.16□□□□□ -2.06
IRC4YDR540C WTM1Q12363 437 aaKnown RBP2.16□□□□□ -2.06
IRC4YDR540C AHC1Q12433 566 aa2.16□□□□□ -2.06
IRC4YDR540C IZH2Q12442 317 aa2.16□□□□□ -2.06
IRC4YDR540C HSP82P02829 709 aaKnown RBP2.15□□□□□ -2.07
IRC4YDR540C SSC1P0CS90 654 aaKnown RBP2.15□□□□□ -2.07
IRC4YDR540C RPL1AP0CX43 217 aaKnown RBP2.15□□□□□ -2.07
IRC4YDR540C RPL1BP0CX44 217 aaKnown RBP2.15□□□□□ -2.07
IRC4YDR540C NAM2P11325 894 aa2.15□□□□□ -2.07
IRC4YDR540C KRR1P25586 316 aaPredicted RBP2.15□□□□□ -2.07
IRC4YDR540C PHO91P27514 894 aa2.15□□□□□ -2.07
IRC4YDR540C YEF1P32622 495 aa2.15□□□□□ -2.07
IRC4YDR540C NRP1P32770 719 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
IRC4YDR540C GAB1P41733 394 aa2.15□□□□□ -2.07
IRC4YDR540C SEC27P41811 889 aaKnown RBP2.15□□□□□ -2.07
IRC4YDR540C STE24P47154 453 aa2.15□□□□□ -2.07
IRC4YDR540C PMT5P52867 743 aa2.15□□□□□ -2.07
IRC4YDR540C ROG1P53118 685 aa2.15□□□□□ -2.07
IRC4YDR540C MRM2P53123 320 aa2.15□□□□□ -2.07
IRC4YDR540C PIB2P53191 635 aa2.15□□□□□ -2.07
IRC4YDR540C YGR016WP53209 190 aa2.15□□□□□ -2.07
IRC4YDR540C SHY1P53266 389 aa2.15□□□□□ -2.07
IRC4YDR540C ADD37Q03233 198 aa2.15□□□□□ -2.07
IRC4YDR540C VTI1Q04338 217 aa2.15□□□□□ -2.07
IRC4YDR540C CUE5Q08412 411 aaKnown RBP2.15□□□□□ -2.07
IRC4YDR540C YGK3Q12222 375 aaPredicted RBP2.15□□□□□ -2.07
IRC4YDR540C PAR32Q12515 295 aaKnown RBP2.15□□□□□ -2.07
IRC4YDR540C POM152P39685 1337 aa2.15□□□□□ -2.07
IRC4YDR540C STF1P01098 86 aa2.14□□□□□ -2.07
IRC4YDR540C PDE2P06776 526 aa2.14□□□□□ -2.07
IRC4YDR540C ATP1P07251 545 aaKnown RBP2.14□□□□□ -2.07
IRC4YDR540C NAT1P12945 854 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms