RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	CLD1	P53264	445 aa		2.68	□□□□□ -1.98
REF2	YDR195W	DCS1	Q06151	350 aa		2.68	□□□□□ -1.98
REF2	YDR195W	ISN1	Q99312	450 aa		2.68	□□□□□ -1.98
REF2	YDR195W	URA4	P20051	364 aa		2.68	□□□□□ -1.98
REF2	YDR195W	EXG1	P23776	448 aa	Known RBP	2.68	□□□□□ -1.98
REF2	YDR195W	BRF1	P29056	596 aa		2.68	□□□□□ -1.98
REF2	YDR195W	YKL097C	P34245	136 aa		2.68	□□□□□ -1.98
REF2	YDR195W	YHK8	P38776	514 aa		2.68	□□□□□ -1.98
REF2	YDR195W	TIM17	P39515	158 aa		2.68	□□□□□ -1.98
REF2	YDR195W	LCB3	P47013	409 aa		2.68	□□□□□ -1.98
REF2	YDR195W	ALF1	P53904	254 aa		2.68	□□□□□ -1.98
REF2	YDR195W	STD1	Q02794	444 aa		2.68	□□□□□ -1.98
REF2	YDR195W	MMT1	Q03218	510 aa		2.68	□□□□□ -1.98
REF2	YDR195W	YMR130W	Q04223	302 aa		2.68	□□□□□ -1.98
REF2	YDR195W	YLR287C	Q05881	355 aa		2.68	□□□□□ -1.98
REF2	YDR195W	MED2	Q12124	431 aa		2.68	□□□□□ -1.98
REF2	YDR195W	EAF3	Q12432	401 aa		2.68	□□□□□ -1.98
REF2	YDR195W	YRF1-4	O13559	1382 aa		2.67	□□□□□ -1.98
REF2	YDR195W	TY1B-A	O13527	1196 aa	Known RBP	2.67	□□□□□ -1.98
REF2	YDR195W	CDC31	P06704	161 aa	Known RBP	2.67	□□□□□ -1.98
REF2	YDR195W	CAP2	P13517	287 aa		2.67	□□□□□ -1.98
REF2	YDR195W	YCR051W	P25631	222 aa		2.67	□□□□□ -1.98
REF2	YDR195W	CHS6	P40955	746 aa		2.67	□□□□□ -1.98
REF2	YDR195W	YPS5	P53057	165 aa		2.67	□□□□□ -1.98
REF2	YDR195W	TDA1	Q03533	586 aa		2.67	□□□□□ -1.98
REF2	YDR195W	BUD21	Q08492	214 aa	Predicted RBP	2.67	□□□□□ -1.98
REF2	YDR195W	SCM3	Q12334	223 aa		2.67	□□□□□ -1.98
REF2	YDR195W	GPI18	P38211	433 aa		2.66	□□□□□ -1.98
REF2	YDR195W	TOS3	P43637	560 aa		2.66	□□□□□ -1.98
REF2	YDR195W	ACL4	Q03771	387 aa		2.66	□□□□□ -1.98
REF2	YDR195W	RPN9	Q04062	393 aa	Known RBP	2.66	□□□□□ -1.98
REF2	YDR195W	PRM6	Q04705	352 aa		2.66	□□□□□ -1.98
REF2	YDR195W	ROY1	Q04847	553 aa		2.66	□□□□□ -1.98
REF2	YDR195W	NCA2	Q12374	616 aa		2.66	□□□□□ -1.98
REF2	YDR195W	NAG1	Q8TGN9	163 aa		2.66	□□□□□ -1.98
REF2	YDR195W	COX3	P00420	269 aa		2.65	□□□□□ -1.98
REF2	YDR195W	PIS1	P06197	220 aa	Known RBP	2.65	□□□□□ -1.98
REF2	YDR195W	GPD2	P41911	440 aa	Known RBP	2.65	□□□□□ -1.98
REF2	YDR195W	PGU1	P47180	361 aa		2.65	□□□□□ -1.98
REF2	YDR195W	TOM22	P49334	152 aa		2.65	□□□□□ -1.98
REF2	YDR195W	YGR018C	P53211	109 aa		2.65	□□□□□ -1.98
REF2	YDR195W	COS1	P53822	381 aa		2.65	□□□□□ -1.98
REF2	YDR195W	OCA2	P53949	197 aa		2.65	□□□□□ -1.98
REF2	YDR195W	TPS1	Q00764	495 aa	Known RBP	2.65	□□□□□ -1.98
REF2	YDR195W	SKI8	Q02793	397 aa	Predicted RBP	2.65	□□□□□ -1.98
REF2	YDR195W	ADH1	P00330	348 aa	Known RBP	2.64	□□□□□ -1.99
REF2	YDR195W	DPH2	P32461	534 aa		2.64	□□□□□ -1.99
REF2	YDR195W	FLC3	P53121	802 aa		2.64	□□□□□ -1.99
REF2	YDR195W	RPT4	P53549	437 aa	Known RBP	2.64	□□□□□ -1.99
REF2	YDR195W	MFG1	Q07684	458 aa		2.64	□□□□□ -1.99
REF2	YDR195W	RUP1	Q12242	671 aa		2.64	□□□□□ -1.99
REF2	YDR195W	LSM5	P40089	93 aa	Known RBP	2.64	□□□□□ -1.99
REF2	YDR195W	GAT2	P40209	560 aa		2.64	□□□□□ -1.99
REF2	YDR195W	YGR250C	P53316	781 aa	Known RBP	2.64	□□□□□ -1.99
REF2	YDR195W	YMR155W	Q03795	547 aa		2.64	□□□□□ -1.99
REF2	YDR195W	MTR10	Q99189	972 aa		2.64	□□□□□ -1.99
REF2	YDR195W	CCH1	P50077	2039 aa		2.63	□□□□□ -1.99
REF2	YDR195W	ZRC1	P20107	442 aa		2.63	□□□□□ -1.99
REF2	YDR195W	RPN12	P32496	274 aa		2.63	□□□□□ -1.99
REF2	YDR195W	YNL208W	P40159	199 aa	Known RBP	2.63	□□□□□ -1.99
REF2	YDR195W	HOT1	Q03213	719 aa		2.63	□□□□□ -1.99
REF2	YDR195W	MMR1	Q06324	491 aa		2.63	□□□□□ -1.99
REF2	YDR195W	YPR091C	Q06833	770 aa		2.63	□□□□□ -1.99
REF2	YDR195W	AFI1	Q99222	893 aa		2.63	□□□□□ -1.99
REF2	YDR195W	DEP1	P31385	405 aa		2.62	□□□□□ -1.99
REF2	YDR195W	YEF1	P32622	495 aa		2.62	□□□□□ -1.99
REF2	YDR195W	YGL262W	P53054	175 aa		2.62	□□□□□ -1.99
REF2	YDR195W	KTR6	P54070	446 aa		2.62	□□□□□ -1.99
REF2	YDR195W	PRP42	Q03776	544 aa	Known RBP	2.62	□□□□□ -1.99
REF2	YDR195W	YDL114W	Q07530	308 aa		2.62	□□□□□ -1.99
REF2	YDR195W	FOL3	Q12676	427 aa	Predicted RBP	2.62	□□□□□ -1.99
REF2	YDR195W	BMT2	P38278	337 aa		2.61	□□□□□ -1.99
REF2	YDR195W	SRB7	P47822	140 aa		2.61	□□□□□ -1.99
REF2	YDR195W	BNI5	P53890	448 aa	Known RBP	2.61	□□□□□ -1.99
REF2	YDR195W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
REF2	YDR195W	ATP1	P07251	545 aa	Known RBP	2.6	□□□□□ -1.99
REF2	YDR195W	COX13	P32799	129 aa		2.6	□□□□□ -1.99
REF2	YDR195W	MRPL27	P36526	146 aa	Predicted RBP	2.6	□□□□□ -1.99
REF2	YDR195W	SLM4	P38247	162 aa		2.6	□□□□□ -1.99
REF2	YDR195W	CAK1	P43568	368 aa	Predicted RBP	2.6	□□□□□ -1.99
REF2	YDR195W	YIP5	P53108	310 aa		2.6	□□□□□ -1.99
REF2	YDR195W	RRP46	P53256	223 aa	Predicted RBP	2.6	□□□□□ -1.99
REF2	YDR195W	PIN3	Q06449	215 aa		2.6	□□□□□ -1.99
REF2	YDR195W	YCR024C-B	Q3E7Z8	88 aa		2.6	□□□□□ -1.99
REF2	YDR195W	POM152	P39685	1337 aa		2.6	□□□□□ -1.99
REF2	YDR195W	INH1	P01097	85 aa		2.6	□□□□□ -1.99
REF2	YDR195W	URA7	P28274	579 aa	Known RBP	2.6	□□□□□ -1.99
REF2	YDR195W	RAD5	P32849	1169 aa	Predicted RBP	2.6	□□□□□ -1.99
REF2	YDR195W	ASC1	P38011	319 aa	Known RBP	2.6	□□□□□ -1.99
REF2	YDR195W	OLA1	P38219	394 aa	Known RBP	2.6	□□□□□ -1.99
REF2	YDR195W	VHS2	P40463	436 aa		2.6	□□□□□ -1.99
REF2	YDR195W	IGD1	P43598	195 aa		2.6	□□□□□ -1.99
REF2	YDR195W	AIP1	P46680	615 aa	Known RBP	2.6	□□□□□ -1.99
REF2	YDR195W	MDM1	Q01846	1127 aa		2.6	□□□□□ -1.99
REF2	YDR195W	MCH1	Q07376	486 aa		2.6	□□□□□ -1.99
REF2	YDR195W	RAX2	Q12465	1220 aa		2.6	□□□□□ -1.99
REF2	YDR195W	HTZ1	Q12692	134 aa	Known RBP	2.6	□□□□□ -1.99
REF2	YDR195W	DST1	P07273	309 aa		2.59	□□□□□ -1.99
REF2	YDR195W	ADK2	P26364	225 aa		2.59	□□□□□ -1.99
REF2	YDR195W	ECT1	P33412	323 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms