RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	MPS2	P53159	387 aa		2.06	□□□□□ -2.08
NCL1	YBL024W	CAF40	P53829	373 aa		2.06	□□□□□ -2.08
NCL1	YBL024W	HXT11	P54862	567 aa		2.06	□□□□□ -2.08
NCL1	YBL024W	PRO2	P54885	456 aa	Known RBP	2.06	□□□□□ -2.08
NCL1	YBL024W	SPH1	Q06160	661 aa		2.06	□□□□□ -2.08
NCL1	YBL024W	SAG1	P20840	650 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	KKQ8	P36004	724 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	RIB5	P38145	238 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	MIX23	P38162	196 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	RPA34	P47006	233 aa	Predicted RBP	2.05	□□□□□ -2.08
NCL1	YBL024W	STE24	P47154	453 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	SSN8	P47821	323 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	GOR1	P53839	350 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	THP3	Q12049	470 aa	Known RBP	2.05	□□□□□ -2.08
NCL1	YBL024W	NBL1	Q3E7Y6	73 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	SLM5	P25345	492 aa	Known RBP	2.05	□□□□□ -2.08
NCL1	YBL024W	AGA1	P32323	725 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	TOA2	P32774	122 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	NAT2	P37293	288 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	MDM31	P38880	579 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	YJL213W	P40896	331 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	YDL186W	P48568	277 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	ADA2	Q02336	434 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	YMR181C	Q03231	154 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	PRP3	Q03338	469 aa	Predicted RBP	2.05	□□□□□ -2.08
NCL1	YBL024W	YPR078C	Q06813	372 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	ASA1	Q06822	443 aa		2.05	□□□□□ -2.08
NCL1	YBL024W	SNX3	Q08826	162 aa	Known RBP	2.05	□□□□□ -2.08
NCL1	YBL024W	RRP12	Q12754	1228 aa	Known RBP	2.05	□□□□□ -2.08
NCL1	YBL024W	GDH1	P07262	454 aa	Known RBP	2.04	□□□□□ -2.08
NCL1	YBL024W	PHO2	P07269	559 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	CPR1	P14832	162 aa	Known RBP	2.04	□□□□□ -2.08
NCL1	YBL024W	SUR1	P33300	382 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	MKT1	P40850	830 aa	Known RBP	2.04	□□□□□ -2.08
NCL1	YBL024W	TOS3	P43637	560 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	YMR317W	Q04893	1140 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	BCH1	Q05029	724 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	AAD15	Q08361	143 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	PEX27	Q08580	376 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	TIP41	Q12199	356 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	TPT1	Q12272	230 aa	Known RBP	2.04	□□□□□ -2.08
NCL1	YBL024W	NCA2	Q12374	616 aa		2.04	□□□□□ -2.08
NCL1	YBL024W	ATP1	P07251	545 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	ARF1	P11076	181 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	RNA1	P11745	407 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	YCL068C	P25593	260 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	MRP4	P32902	394 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	RRF1	P38771	230 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	OSW5	P40219	148 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	ATM1	P40416	690 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	SFH5	P47008	294 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	RRN9	P53437	365 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	MSO1	P53604	210 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	COS1	P53822	381 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	PRM1	P53835	661 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	IBD2	P53892	351 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	CCE1	Q03702	353 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	SMA2	Q04658	369 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	LDS2	Q08218	356 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	SSC1	P0CS90	654 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	CAP2	P13517	287 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	EXG1	P23776	448 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	DBR1	P24309	405 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	COX13	P32799	129 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	SRB2	P34162	210 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	DOA1	P36037	715 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	FMP46	P36141	133 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	ATP3	P38077	311 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	YBP1	P38315	674 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	JLP2	P40206	208 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	YGR117C	P53270	476 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	HST1	P53685	503 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	CRZ1	P53968	678 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	ABZ2	Q03266	374 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	RAX1	Q08760	435 aa		2.03	□□□□□ -2.08
NCL1	YBL024W	RTC5	Q12108	567 aa	Known RBP	2.03	□□□□□ -2.08
NCL1	YBL024W	TPK3	P05986	398 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	DAL5	P15365	543 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	THR4	P16120	514 aa	Known RBP	2.02	□□□□□ -2.09
NCL1	YBL024W	HEM15	P16622	393 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	SPS22	P25380	463 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	PRO3	P32263	286 aa	Known RBP	2.02	□□□□□ -2.09
NCL1	YBL024W	SKT5	P34226	696 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	PCH2	P38126	564 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	CHK1	P38147	527 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	YBL028C	P38202	106 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	MTC6	P38849	526 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	LIN1	P38852	340 aa	Predicted RBP	2.02	□□□□□ -2.09
NCL1	YBL024W	IDP2	P41939	412 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	ABM1	P47146	123 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	GPI8	P49018	411 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	RET3	P53600	189 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	MGR3	Q04472	501 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	YTH1	Q06102	208 aa	Predicted RBP	2.02	□□□□□ -2.09
NCL1	YBL024W	HNT3	Q08702	217 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	AIM45	Q12480	344 aa	Known RBP	2.02	□□□□□ -2.09
NCL1	YBL024W	YCL021W-A	Q96VH3	125 aa		2.02	□□□□□ -2.09
NCL1	YBL024W	RPS16A	P0CX51	143 aa	Known RBP	2.02	□□□□□ -2.09
NCL1	YBL024W	RPS16B	P0CX52	143 aa	Known RBP	2.02	□□□□□ -2.09
NCL1	YBL024W	MAS1	P10507	462 aa		2.02	□□□□□ -2.09

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms