RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 FAM26DQ5JW98 314 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 ZNF746Q6NUN9 644 aaPredicted RBP11.25□□□□□ -0.61
SKA2-208ENST00000583927 TAF2Q6P1X5 1199 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 ABHD15Q6UXT9 468 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 DEFB128Q7Z7B8 93 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 PLA2G4DQ86XP0 818 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 IL27Q8NEV9 243 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 LMBR1Q8WVP7 490 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 WNT8BQ93098 351 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 LENG9Q96B70 501 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 TIFAQ96CG3 184 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 PCYT2Q99447 389 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 SETD4Q9NVD3 440 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 MSRAQ9UJ68 235 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 PCDHA11Q9Y5I1 949 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 RALGAPA2Q2PPJ7 1873 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 SEC24BO95487 1268 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 ATP2A2P16615 1042 aaKnown RBP11.24□□□□□ -0.61
SKA2-208ENST00000583927 XBP1P17861 261 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 SP4Q02446 784 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 STK3Q13188 491 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
SKA2-208ENST00000583927 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 UTP14CQ5TAP6 766 aaKnown RBP11.24□□□□□ -0.61
SKA2-208ENST00000583927 FAM43BQ6ZT52 329 aaPredicted RBP11.24□□□□□ -0.61
SKA2-208ENST00000583927 SMAP1Q8IYB5 467 aaPredicted RBP11.24□□□□□ -0.61
SKA2-208ENST00000583927 BLIDQ8IZY5 108 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 GLG1Q92896 1179 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 MBOAT7Q96N66 472 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 PHF20Q9BVI0 1012 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 ZNF576Q9H609 170 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 AZI2Q9H6S1 392 aa11.24□□□□□ -0.61
SKA2-208ENST00000583927 CTDNEP1O95476 244 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 CCNE2O96020 404 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 THPOP40225 353 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 STAT5BP51692 787 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 NEK4P51957 841 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 KRT76Q01546 638 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 PPFIA1Q13136 1202 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 GRIK4Q16099 956 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 C8orf34Q49A92 452 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 Q4G0T1 1027 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 PLEKHG4Q58EX7 1191 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 MARCH8Q5T0T0 291 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 TBCKQ8TEA7 893 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 WASF1Q92558 559 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 GTF3C6Q969F1 213 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 RIT2Q99578 217 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
SKA2-208ENST00000583927 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
SKA2-208ENST00000583927 ZNF577Q9BSK1 485 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
SKA2-208ENST00000583927 PKD2L1Q9P0L9 805 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 SQORQ9Y6N5 450 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 COL1A2P08123 1366 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 COL4A6Q14031 1691 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 XIRP2A4UGR9 3374 aa11.23□□□□□ -0.61
SKA2-208ENST00000583927 ZBBXA8MT70 800 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 GRXCR1A8MXD5 290 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 HBP1O60381 514 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 INSRRP14616 1297 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 PBX2P40425 430 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 WDR5P61964 334 aaKnown RBP11.22□□□□□ -0.61
SKA2-208ENST00000583927 IKBKEQ14164 716 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 PLCB4Q15147 1175 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 ME3Q16798 604 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 PRR16Q569H4 304 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 FAM160B1Q5W0V3 765 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 KRT25Q7Z3Z0 450 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 RSPH3Q86UC2 560 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 APBB2Q92870 758 aa11.22□□□□□ -0.61
SKA2-208ENST00000583927 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
SKA2-208ENST00000583927 ARID2Q68CP9 1835 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 MSH4O15457 936 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.61
SKA2-208ENST00000583927 MARK3P27448 753 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 KCNJ6P48051 423 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 RBM25P49756 843 aaKnown RBP11.21□□□□□ -0.61
SKA2-208ENST00000583927 MGAT3Q09327 533 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 NONOQ15233 471 aaKnown RBP eCLIP11.21□□□□□ -0.61
SKA2-208ENST00000583927 PPP4R3AQ6IN85 833 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 MIS18BP1Q6P0N0 1132 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 B3GNT9Q6UX72 402 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 HERC6Q8IVU3 1022 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.61
SKA2-208ENST00000583927 NME8Q8N427 588 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
SKA2-208ENST00000583927 RDM1Q8NG50 284 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 ATP8B4Q8TF62 1192 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 SLC5A5Q92911 643 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms