RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 ERVK-21P61565 698 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 IGBP1P78318 339 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 DEFB103AP81534 67 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 SSRP1Q08945 709 aaKnown RBP7.41□□□□□ -1.22
FOXN3-205ENST00000553904 ADGRE1Q14246 886 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 PTPROQ16827 1216 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 JAKMIP3Q5VZ66 844 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 GALNT17Q6IS24 598 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 TRAF7Q6Q0C0 670 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 POTEBQ6S5H4 581 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 CKAP2LQ8IYA6 745 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 SMAP1Q8IYB5 467 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-205ENST00000553904 DNAJB3Q8WWF6 145 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 HLA-CQ95604 372 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 IL17RAQ96F46 866 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 ZNF274Q96GC6 653 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-205ENST00000553904 ZNF577Q9BSK1 485 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 AGXT2Q9BYV1 514 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 TM6SF1Q9BZW5 370 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 CERS4Q9HA82 394 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 ZSWIM6Q9HCJ5 1215 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 AGO4Q9HCK5 861 aaKnown RBP7.41□□□□□ -1.22
FOXN3-205ENST00000553904 FAM217BQ9NTX9 383 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-205ENST00000553904 CEP131Q9UPN4 1083 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 RWDD3Q9Y3V2 267 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 SAMM50Q9Y512 469 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 PCDHA2Q9Y5H9 948 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 MTCH2Q9Y6C9 303 aa7.41□□□□□ -1.22
FOXN3-205ENST00000553904 SCN10AQ9Y5Y9 1956 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 MBLAC1A4D2B0 266 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-205ENST00000553904 NCK2O43639 380 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 CDKL5O76039 1030 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 UPP2O95045 317 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 DEXIO95424 95 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 CHRNA1P02708 482 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 RB1P06400 928 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 PSAPP07602 524 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 CTSHP09668 335 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 ARP10275 920 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 TMOD1P28289 359 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 PDIA3P30101 505 aaKnown RBP7.4□□□□□ -1.22
FOXN3-205ENST00000553904 MRPS6P82932 125 aaKnown RBP7.4□□□□□ -1.22
FOXN3-205ENST00000553904 HTRA4P83105 476 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-205ENST00000553904 CDC42EP1Q00587 391 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 KRT76Q01546 638 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 HIC1Q14526 733 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 MBTPS1Q14703 1052 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 ANKRD1Q15327 319 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 ZNF484Q5JVG2 852 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 ZNF746Q6NUN9 644 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-205ENST00000553904 FAM117BQ6P1L5 589 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 PDXDC2PQ6P474 469 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.4□□□□□ -1.22
FOXN3-205ENST00000553904 TSHZ1Q6ZSZ6 1077 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 TRIM50Q86XT4 487 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 FBXO22Q8NEZ5 403 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 CYP2W1Q8TAV3 490 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 BBXQ8WY36 941 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-205ENST00000553904 WNT8BQ93098 351 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 SLC26A6Q9BXS9 759 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 ZNF302Q9NR11 478 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 NRBP2Q9NSY0 501 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 TMEM260Q9NX78 707 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 PPP4R2Q9NY27 417 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 PCDHA10Q9Y5I2 948 aa7.4□□□□□ -1.22
FOXN3-205ENST00000553904 RANBP2P49792 3224 aaKnown RBP7.4□□□□□ -1.23
FOXN3-205ENST00000553904 LCTP09848 1927 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 COL1A2P08123 1366 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 IGKV6D-21A0A0A0MT36 114 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 LINC01553A4QN01 128 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 TNFRSF10AO00220 468 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 RFXAPO00287 272 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 ENPP3O14638 875 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 GPR182O15218 404 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 MAGEB2O15479 319 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 GHRP10912 638 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 KLRC1P26715 233 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 SFNP31947 248 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 CIITAP33076 1130 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 CCT2P78371 535 aaKnown RBP7.39□□□□□ -1.23
FOXN3-205ENST00000553904 GRB10Q13322 594 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 COL9A3Q14050 684 aaPredicted RBP7.39□□□□□ -1.23
FOXN3-205ENST00000553904 PLCB4Q15147 1175 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 PKN1Q16512 942 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 MARCH8Q5T0T0 291 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 TYW1BQ6NUM6 668 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 SWSAP1Q6NVH7 229 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 MTHFD1LQ6UB35 978 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 ABHD15Q6UXT9 468 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 SKAP1Q86WV1 359 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 FIBCD1Q8N539 461 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 PGBD1Q96JS3 809 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 FAM167AQ96KS9 214 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 CELF4Q9BZC1 486 aaKnown RBP7.39□□□□□ -1.23
FOXN3-205ENST00000553904 SUGCTQ9HAC7 445 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 PDRG1Q9NUG6 133 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 LRFN2Q9ULH4 789 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 TRPV2Q9Y5S1 764 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 CDY2AQ9Y6F7 541 aa7.39□□□□□ -1.23
FOXN3-205ENST00000553904 KDM3AQ9Y4C1 1321 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms