RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 SLC9A7Q96T83 725 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 PBX4Q9BYU1 374 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 KCNJ14Q9UNX9 436 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 SAMM50Q9Y512 469 aa12.71□□□□□ -0.37
RFFL-204ENST00000414419 EVPLQ92817 2033 aa12.71□□□□□ -0.38
RFFL-204ENST00000414419 CCDC194A0A1B0GVG4 234 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 KIF28PB7ZC32 967 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 NBNO60934 754 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 ATG7O95352 703 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 SLC26A2P50443 739 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 IGBP1P78318 339 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 KRT76Q01546 638 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 IKBKEQ14164 716 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 KRT25Q7Z3Z0 450 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 VWCEQ96DN2 955 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 PHF20Q9BVI0 1012 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 ZNF576Q9H609 170 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 SLC28A3Q9HAS3 691 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
RFFL-204ENST00000414419 BRMS1Q9HCU9 246 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 ZNF302Q9NR11 478 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 TUBE1Q9UJT0 475 aa12.7□□□□□ -0.38
RFFL-204ENST00000414419 LOXHD1Q8IVV2 1947 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 ABHD14A-ACY1A0A1B0GW23 586 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 POTEB3A0JP26 581 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 DHX15O43143 795 aaKnown RBP12.69□□□□□ -0.38
RFFL-204ENST00000414419 EFCAB14O75071 495 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 LARGE1O95461 756 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 CCNE2O96020 404 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 CXCL10P02778 98 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 PSAPP07602 524 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 CTSHP09668 335 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 INSRRP14616 1297 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 PBX2P40425 430 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 ADAM17P78536 824 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 TRIM29Q14134 588 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 ZNF746Q6NUN9 644 aaPredicted RBP12.69□□□□□ -0.38
RFFL-204ENST00000414419 SWSAP1Q6NVH7 229 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 PDXDC2PQ6P474 469 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 POTEBQ6S5H4 581 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 ABHD15Q6UXT9 468 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 CKAP2LQ8IYA6 745 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 SMAP1Q8IYB5 467 aaPredicted RBP12.69□□□□□ -0.38
RFFL-204ENST00000414419 PHOSPHO2Q8TCD6 241 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 PCYT2Q99447 389 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 TTYH1Q9H313 450 aaPredicted RBP12.69□□□□□ -0.38
RFFL-204ENST00000414419 LIMCH1Q9UPQ0 1083 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
RFFL-204ENST00000414419 MICAL3Q7RTP6 2002 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 M0R2N6 131 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 MSH4O15457 936 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 GAS7O60861 476 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 RPLP2P05387 115 aaKnown RBP12.68□□□□□ -0.38
RFFL-204ENST00000414419 RABGGTBP53611 331 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 GPNMBQ14956 572 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 INF2Q27J81 1249 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 Q4G0T1 1027 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 TRAF7Q6Q0C0 670 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 GUCD1Q96NT3 240 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 RIT2Q99578 217 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 CDX2Q99626 313 aaPredicted RBP12.68□□□□□ -0.38
RFFL-204ENST00000414419 ZBED2Q9BTP6 218 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 TEKT3Q9BXF9 490 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 NKX2-4Q9H2Z4 354 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 PCDHA11Q9Y5I1 949 aa12.68□□□□□ -0.38
RFFL-204ENST00000414419 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 MBLAC1A4D2B0 266 aaPredicted RBP12.67□□□□□ -0.38
RFFL-204ENST00000414419 WDR64B1ANS9 1081 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 M0QZ92 97 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 HBP1O60381 514 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 DTNBO60941 627 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 KRT2P35908 639 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 MBTPS1Q14703 1052 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 NPY5RQ15761 445 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 LETM2Q2VYF4 491 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 LRCH2Q5VUJ6 765 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 IER5Q5VY09 327 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 MOXD1Q6UVY6 613 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 RUFY4Q6ZNE9 571 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
RFFL-204ENST00000414419 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
RFFL-204ENST00000414419 DBF4BQ8NFT6 615 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 ATP8B4Q8TF62 1192 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 DNAJB3Q8WWF6 145 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 SEPT8Q92599 483 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 LENG9Q96B70 501 aa12.67□□□□□ -0.38
RFFL-204ENST00000414419 ZSCAN31Q96LW9 406 aaPredicted RBP12.67□□□□□ -0.38
RFFL-204ENST00000414419 NAP1L4Q99733 375 aaKnown RBP12.67□□□□□ -0.38
RFFL-204ENST00000414419 FAM49AQ9H0Q0 323 aaPredicted RBP12.67□□□□□ -0.38
RFFL-204ENST00000414419 PTPRSQ13332 1948 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 CYP3A7-CYP3A51PA0A087WV96 503 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 CHMP2AO43633 222 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 TLL1O43897 1013 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 MARCH6O60337 910 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 TDP2O95551 362 aa12.66□□□□□ -0.38
RFFL-204ENST00000414419 FDPSP14324 419 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms