RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C NTH1P32356 751 aa7.88□□□□□ -1.15
SRP54YPR088C HOG1P32485 435 aa7.88□□□□□ -1.15
SRP54YPR088C PEP12P32854 288 aa7.88□□□□□ -1.15
SRP54YPR088C MNL1P38888 796 aa7.88□□□□□ -1.15
SRP54YPR088C AIM2P39721 246 aa7.88□□□□□ -1.15
SRP54YPR088C PDS1P40316 373 aaPredicted RBP7.88□□□□□ -1.15
SRP54YPR088C LYS12P40495 371 aaKnown RBP7.88□□□□□ -1.15
SRP54YPR088C RRN5Q02983 363 aa7.88□□□□□ -1.15
SRP54YPR088C STP3Q05937 343 aa7.88□□□□□ -1.15
SRP54YPR088C SPO77Q06134 477 aa7.88□□□□□ -1.15
SRP54YPR088C LOT6Q07923 191 aa7.88□□□□□ -1.15
SRP54YPR088C MCA1Q08601 432 aa7.88□□□□□ -1.15
SRP54YPR088C PUS7Q08647 676 aaKnown RBP7.88□□□□□ -1.15
SRP54YPR088C MMT2Q08970 484 aa7.88□□□□□ -1.15
SRP54YPR088C GLO4Q12320 285 aa7.88□□□□□ -1.15
SRP54YPR088C RKM5Q12367 367 aa7.88□□□□□ -1.15
SRP54YPR088C TIM9O74700 87 aa7.87□□□□□ -1.15
SRP54YPR088C COR1P07256 457 aa7.87□□□□□ -1.15
SRP54YPR088C PUT2P07275 575 aa7.87□□□□□ -1.15
SRP54YPR088C SNF5P18480 905 aa7.87□□□□□ -1.15
SRP54YPR088C VPS33P20795 691 aa7.87□□□□□ -1.15
SRP54YPR088C NPR1P22211 790 aa7.87□□□□□ -1.15
SRP54YPR088C RPS1BP23248 255 aaKnown RBP7.87□□□□□ -1.15
SRP54YPR088C FAU1P40099 211 aa7.87□□□□□ -1.15
SRP54YPR088C MPM1P40364 252 aa7.87□□□□□ -1.15
SRP54YPR088C QDR2P40474 542 aa7.87□□□□□ -1.15
SRP54YPR088C RPL10P41805 221 aaKnown RBP7.87□□□□□ -1.15
SRP54YPR088C RQC1Q05468 723 aaKnown RBP7.87□□□□□ -1.15
SRP54YPR088C DTD1Q07648 150 aaKnown RBP7.87□□□□□ -1.15
SRP54YPR088C RPL1AP0CX43 217 aaKnown RBP7.86□□□□□ -1.15
SRP54YPR088C RPL1BP0CX44 217 aaKnown RBP7.86□□□□□ -1.15
SRP54YPR088C TAH1P25638 111 aaPredicted RBP7.86□□□□□ -1.15
SRP54YPR088C UBC8P28263 218 aa7.86□□□□□ -1.15
SRP54YPR088C CWP1P28319 239 aa7.86□□□□□ -1.15
SRP54YPR088C BCK2P33306 851 aa7.86□□□□□ -1.15
SRP54YPR088C UTH1P36135 365 aa7.86□□□□□ -1.15
SRP54YPR088C HOC1P47124 396 aa7.86□□□□□ -1.15
SRP54YPR088C DCP2P53550 970 aaKnown RBP7.86□□□□□ -1.15
SRP54YPR088C CSL4P53859 292 aaPredicted RBP7.86□□□□□ -1.15
SRP54YPR088C RHO4Q00246 291 aa7.86□□□□□ -1.15
SRP54YPR088C YMR310CQ04867 317 aaPredicted RBP7.86□□□□□ -1.15
SRP54YPR088C ISR1Q06098 443 aaKnown RBP7.86□□□□□ -1.15
SRP54YPR088C HTS1P07263 546 aaKnown RBP7.85□□□□□ -1.15
SRP54YPR088C HOP1P20050 605 aa7.85□□□□□ -1.15
SRP54YPR088C FAR1P21268 830 aa7.85□□□□□ -1.15
SRP54YPR088C SLY41P22215 453 aa7.85□□□□□ -1.15
SRP54YPR088C LHP1P33399 275 aaKnown RBP7.85□□□□□ -1.15
SRP54YPR088C YJL068CP40363 299 aa7.85□□□□□ -1.15
SRP54YPR088C MRPS18P42847 217 aa7.85□□□□□ -1.15
SRP54YPR088C UBC9P50623 157 aaPredicted RBP7.85□□□□□ -1.15
SRP54YPR088C SED5Q01590 340 aa7.85□□□□□ -1.15
SRP54YPR088C SFM1Q12314 213 aa7.85□□□□□ -1.15
SRP54YPR088C RHO1P06780 209 aaKnown RBP7.85□□□□□ -1.15
SRP54YPR088C DBP3P20447 523 aaKnown RBP7.85□□□□□ -1.15
SRP54YPR088C YMC1P32331 307 aa7.85□□□□□ -1.15
SRP54YPR088C RPC82P32349 654 aa7.85□□□□□ -1.15
SRP54YPR088C MKK1P32490 508 aa7.85□□□□□ -1.15
SRP54YPR088C MRPL6P32904 214 aa7.85□□□□□ -1.15
SRP54YPR088C ZTA1P38230 334 aaKnown RBP7.85□□□□□ -1.15
SRP54YPR088C MTG2P38860 518 aa7.85□□□□□ -1.15
SRP54YPR088C TPA1P40032 644 aaKnown RBP7.85□□□□□ -1.15
SRP54YPR088C YRB2P40517 327 aa7.85□□□□□ -1.15
SRP54YPR088C YGR201CP42936 225 aa7.85□□□□□ -1.15
SRP54YPR088C FAR7P43592 221 aa7.85□□□□□ -1.15
SRP54YPR088C IBA57P47158 497 aa7.85□□□□□ -1.15
SRP54YPR088C RIM21P48565 533 aa7.85□□□□□ -1.15
SRP54YPR088C YGR079WP53249 370 aa7.85□□□□□ -1.15
SRP54YPR088C REH1Q06709 432 aa7.85□□□□□ -1.15
SRP54YPR088C TOR2P32600 2474 aaKnown RBP7.85□□□□□ -1.15
SRP54YPR088C MF(ALPHA)1P01149 165 aa7.84□□□□□ -1.15
SRP54YPR088C CDC4P07834 779 aa7.84□□□□□ -1.15
SRP54YPR088C ZWF1P11412 505 aaKnown RBP7.84□□□□□ -1.15
SRP54YPR088C YJU2P28320 278 aaPredicted RBP7.84□□□□□ -1.15
SRP54YPR088C PTP2P29461 750 aa7.84□□□□□ -1.15
SRP54YPR088C CYS4P32582 507 aaKnown RBP7.84□□□□□ -1.15
SRP54YPR088C HCS1P34243 683 aa7.84□□□□□ -1.15
SRP54YPR088C YRO2P38079 344 aa7.84□□□□□ -1.15
SRP54YPR088C PRP39P39682 629 aaKnown RBP7.84□□□□□ -1.15
SRP54YPR088C ATF2P53296 535 aa7.84□□□□□ -1.15
SRP54YPR088C YNL181WP53878 407 aa7.84□□□□□ -1.15
SRP54YPR088C ENT2Q05785 613 aa7.84□□□□□ -1.15
SRP54YPR088C OPT2Q06593 877 aa7.84□□□□□ -1.15
SRP54YPR088C YLR030WQ07967 263 aa7.84□□□□□ -1.15
SRP54YPR088C YKL033W-AQ86ZR7 236 aa7.84□□□□□ -1.15
SRP54YPR088C RIB3Q99258 208 aa7.84□□□□□ -1.15
SRP54YPR088C CHA1P25379 360 aaKnown RBP7.83□□□□□ -1.16
SRP54YPR088C RER1P25560 188 aa7.83□□□□□ -1.16
SRP54YPR088C ARE1P25628 610 aa7.83□□□□□ -1.16
SRP54YPR088C SAC1P32368 623 aaKnown RBP7.83□□□□□ -1.16
SRP54YPR088C CDC12P32468 407 aaKnown RBP7.83□□□□□ -1.16
SRP54YPR088C LOT5P34234 306 aa7.83□□□□□ -1.16
SRP54YPR088C YBR285WP38354 144 aa7.83□□□□□ -1.16
SRP54YPR088C MPH1P40562 993 aa7.83□□□□□ -1.16
SRP54YPR088C REC102Q02721 264 aa7.83□□□□□ -1.16
SRP54YPR088C RSC9Q03124 581 aa7.83□□□□□ -1.16
SRP54YPR088C DIC1Q06143 298 aa7.83□□□□□ -1.16
SRP54YPR088C GIC2Q06648 383 aa7.83□□□□□ -1.16
SRP54YPR088C YTM1Q12024 460 aaPredicted RBP7.83□□□□□ -1.16
SRP54YPR088C SKS1Q12505 502 aa7.83□□□□□ -1.16
SRP54YPR088C TSC13Q99190 310 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms