RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W SMY1P32364 656 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W ECM25P32525 599 aa2.21□□□□□ -2.06
VPS16YPL045W IME2P32581 645 aa2.21□□□□□ -2.06
VPS16YPL045W YUH1P35127 236 aa2.21□□□□□ -2.06
VPS16YPL045W STV1P37296 890 aa2.21□□□□□ -2.06
VPS16YPL045W MOH1P38191 138 aa2.21□□□□□ -2.06
VPS16YPL045W LEU5P38702 357 aa2.21□□□□□ -2.06
VPS16YPL045W STP2P38704 541 aa2.21□□□□□ -2.06
VPS16YPL045W UBP5P39944 805 aa2.21□□□□□ -2.06
VPS16YPL045W PAC11P40960 533 aa2.21□□□□□ -2.06
VPS16YPL045W LOC1P43586 204 aaPredicted RBP2.21□□□□□ -2.06
VPS16YPL045W IRC7P43623 340 aa2.21□□□□□ -2.06
VPS16YPL045W TRS85P46944 698 aa2.21□□□□□ -2.06
VPS16YPL045W SSK1Q07084 712 aa2.21□□□□□ -2.06
VPS16YPL045W RUP1Q12242 671 aa2.21□□□□□ -2.06
VPS16YPL045W CDC21P06785 304 aa2.21□□□□□ -2.06
VPS16YPL045W SAM1P10659 382 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W GAL3P13045 520 aa2.21□□□□□ -2.06
VPS16YPL045W THR4P16120 514 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W CYS4P32582 507 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W RGT1P32862 1170 aa2.21□□□□□ -2.06
VPS16YPL045W MIC60P36112 540 aa2.21□□□□□ -2.06
VPS16YPL045W FLO10P36170 1169 aa2.21□□□□□ -2.06
VPS16YPL045W CBP4P37267 147 aa2.21□□□□□ -2.06
VPS16YPL045W ATP3P38077 311 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W INM1P38710 295 aa2.21□□□□□ -2.06
VPS16YPL045W FAU1P40099 211 aa2.21□□□□□ -2.06
VPS16YPL045W AGX1P43567 385 aa2.21□□□□□ -2.06
VPS16YPL045W PNC1P53184 216 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W LGE1Q02796 332 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W FMP30Q02883 468 aa2.21□□□□□ -2.06
VPS16YPL045W GIP3Q03016 1276 aa2.21□□□□□ -2.06
VPS16YPL045W YLR297WQ05899 129 aa2.21□□□□□ -2.06
VPS16YPL045W RRT8Q08219 342 aa2.21□□□□□ -2.06
VPS16YPL045W EDE1P34216 1381 aa2.21□□□□□ -2.06
VPS16YPL045W GAL4P04386 881 aa2.2□□□□□ -2.06
VPS16YPL045W SUP35P05453 685 aaKnown RBP2.2□□□□□ -2.06
VPS16YPL045W SEC62P21825 274 aa2.2□□□□□ -2.06
VPS16YPL045W RPI1P23250 407 aaKnown RBP2.2□□□□□ -2.06
VPS16YPL045W YBL028CP38202 106 aa2.2□□□□□ -2.06
VPS16YPL045W SMC2P38989 1170 aaKnown RBP2.2□□□□□ -2.06
VPS16YPL045W YER079WP40052 210 aaKnown RBP2.2□□□□□ -2.06
VPS16YPL045W BRO1P48582 844 aa2.2□□□□□ -2.06
VPS16YPL045W SLI1P53304 468 aa2.2□□□□□ -2.06
VPS16YPL045W YGR266WP53326 701 aa2.2□□□□□ -2.06
VPS16YPL045W RTT102P53330 157 aa2.2□□□□□ -2.06
VPS16YPL045W DSL1P53847 754 aa2.2□□□□□ -2.06
VPS16YPL045W CAC2Q04199 468 aa2.2□□□□□ -2.06
VPS16YPL045W DIC1Q06143 298 aa2.2□□□□□ -2.06
VPS16YPL045W ECM7Q06200 448 aa2.2□□□□□ -2.06
VPS16YPL045W SGT2Q12118 346 aaKnown RBP2.2□□□□□ -2.06
VPS16YPL045W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
VPS16YPL045W PKH2Q12236 1081 aaKnown RBP2.2□□□□□ -2.06
VPS16YPL045W RNH203Q12338 110 aa2.2□□□□□ -2.06
VPS16YPL045W RMD5Q12508 421 aa2.2□□□□□ -2.06
VPS16YPL045W RNR2P09938 399 aaKnown RBP2.2□□□□□ -2.06
VPS16YPL045W HXT2P23585 541 aa2.2□□□□□ -2.06
VPS16YPL045W RAD57P25301 460 aa2.2□□□□□ -2.06
VPS16YPL045W BUB3P26449 341 aa2.2□□□□□ -2.06
VPS16YPL045W NUP84P52891 726 aa2.2□□□□□ -2.06
VPS16YPL045W CTL1Q03220 320 aaKnown RBP2.2□□□□□ -2.06
VPS16YPL045W SLD5Q03406 294 aa2.2□□□□□ -2.06
VPS16YPL045W TAF12Q03761 539 aa2.2□□□□□ -2.06
VPS16YPL045W URH1Q04179 340 aa2.2□□□□□ -2.06
VPS16YPL045W MCP2Q06567 569 aa2.2□□□□□ -2.06
VPS16YPL045W RRI1Q12468 440 aa2.2□□□□□ -2.06
VPS16YPL045W RPL12AP0CX53 165 aaKnown RBP2.19□□□□□ -2.06
VPS16YPL045W RPL12BP0CX54 165 aa2.19□□□□□ -2.06
VPS16YPL045W MAS1P10507 462 aa2.19□□□□□ -2.06
VPS16YPL045W CTR86P25355 563 aa2.19□□□□□ -2.06
VPS16YPL045W APE2P32454 952 aaKnown RBP2.19□□□□□ -2.06
VPS16YPL045W RPT5P33297 434 aaKnown RBP2.19□□□□□ -2.06
VPS16YPL045W SWC5P38326 303 aa2.19□□□□□ -2.06
VPS16YPL045W ERG7P38604 731 aa2.19□□□□□ -2.06
VPS16YPL045W YAL037WP39728 267 aa2.19□□□□□ -2.06
VPS16YPL045W GCD14P46959 383 aaPredicted RBP2.19□□□□□ -2.06
VPS16YPL045W RIB4P50861 169 aaPredicted RBP2.19□□□□□ -2.06
VPS16YPL045W GPI1P53306 609 aa2.19□□□□□ -2.06
VPS16YPL045W CAB5Q03941 241 aa2.19□□□□□ -2.06
VPS16YPL045W YMR087WQ04299 284 aa2.19□□□□□ -2.06
VPS16YPL045W URC2Q04411 772 aa2.19□□□□□ -2.06
VPS16YPL045W YMR310CQ04867 317 aaPredicted RBP2.19□□□□□ -2.06
VPS16YPL045W IVY1Q04934 453 aa2.19□□□□□ -2.06
VPS16YPL045W YPR078CQ06813 372 aa2.19□□□□□ -2.06
VPS16YPL045W PEX27Q08580 376 aa2.19□□□□□ -2.06
VPS16YPL045W GEP3Q08622 556 aa2.19□□□□□ -2.06
VPS16YPL045W OPI3P05375 206 aa2.18□□□□□ -2.06
VPS16YPL045W IMA3P0CW40 589 aa2.18□□□□□ -2.06
VPS16YPL045W IMA4P0CW41 589 aa2.18□□□□□ -2.06
VPS16YPL045W UGA1P17649 471 aa2.18□□□□□ -2.06
VPS16YPL045W COQ3P27680 312 aa2.18□□□□□ -2.06
VPS16YPL045W OAR1P35731 278 aa2.18□□□□□ -2.06
VPS16YPL045W HOT13P36078 116 aa2.18□□□□□ -2.06
VPS16YPL045W YKL070WP36087 169 aa2.18□□□□□ -2.06
VPS16YPL045W TIF5P38431 405 aaKnown RBP2.18□□□□□ -2.06
VPS16YPL045W YAP3P38749 330 aa2.18□□□□□ -2.06
VPS16YPL045W YHR122WP38829 231 aa2.18□□□□□ -2.06
VPS16YPL045W END3P39013 349 aa2.18□□□□□ -2.06
VPS16YPL045W VRG4P40107 337 aa2.18□□□□□ -2.06
VPS16YPL045W SEC27P41811 889 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms