RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W NAM2P11325 894 aa3.47□□□□□ -1.85
SSU72YNL222W RPN12P32496 274 aa3.47□□□□□ -1.85
SSU72YNL222W NUP2P32499 720 aa3.47□□□□□ -1.85
SSU72YNL222W YAL037WP39728 267 aa3.47□□□□□ -1.85
SSU72YNL222W AIM10P39965 576 aaKnown RBP3.47□□□□□ -1.85
SSU72YNL222W PHO86P46956 311 aa3.47□□□□□ -1.85
SSU72YNL222W MDE1P47095 244 aa3.47□□□□□ -1.85
SSU72YNL222W YJR085CP47131 105 aaKnown RBP3.47□□□□□ -1.85
SSU72YNL222W MEH1Q02205 184 aa3.47□□□□□ -1.85
SSU72YNL222W RCF1Q03713 159 aa3.47□□□□□ -1.85
SSU72YNL222W TAF12Q03761 539 aa3.47□□□□□ -1.85
SSU72YNL222W COG4Q06096 861 aa3.47□□□□□ -1.85
SSU72YNL222W CUE5Q08412 411 aaKnown RBP3.47□□□□□ -1.85
SSU72YNL222W SCEIP03882 235 aa3.46□□□□□ -1.86
SSU72YNL222W NPL6P32832 435 aa3.46□□□□□ -1.86
SSU72YNL222W MPE1P35728 441 aaKnown RBP3.46□□□□□ -1.86
SSU72YNL222W RRP4P38792 359 aaKnown RBP3.46□□□□□ -1.86
SSU72YNL222W UTP18P40362 594 aaPredicted RBP3.46□□□□□ -1.86
SSU72YNL222W GAB1P41733 394 aa3.46□□□□□ -1.86
SSU72YNL222W SFH5P47008 294 aa3.46□□□□□ -1.86
SSU72YNL222W NUP116Q02630 1113 aa3.46□□□□□ -1.86
SSU72YNL222W YLR287CQ05881 355 aa3.46□□□□□ -1.86
SSU72YNL222W DIS3Q08162 1001 aaKnown RBP3.46□□□□□ -1.86
SSU72YNL222W SRL2Q12020 392 aa3.46□□□□□ -1.86
SSU72YNL222W TY1B-AO13527 1196 aaKnown RBP3.45□□□□□ -1.86
SSU72YNL222W CDC31P06704 161 aaKnown RBP3.45□□□□□ -1.86
SSU72YNL222W HSP26P15992 214 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
SSU72YNL222W MRP21P38175 177 aa3.45□□□□□ -1.86
SSU72YNL222W YDR341CQ05506 607 aaKnown RBP3.45□□□□□ -1.86
SSU72YNL222W IZH2Q12442 317 aa3.45□□□□□ -1.86
SSU72YNL222W ISN1Q99312 450 aa3.45□□□□□ -1.86
SSU72YNL222W INH1P01097 85 aa3.44□□□□□ -1.86
SSU72YNL222W RAD51P25454 400 aa3.44□□□□□ -1.86
SSU72YNL222W NFU1P32860 256 aa3.44□□□□□ -1.86
SSU72YNL222W RRN10P38204 145 aa3.44□□□□□ -1.86
SSU72YNL222W SEC27P41811 889 aaKnown RBP3.44□□□□□ -1.86
SSU72YNL222W SKO1Q02100 647 aa3.44□□□□□ -1.86
SSU72YNL222W YMR155WQ03795 547 aa3.44□□□□□ -1.86
SSU72YNL222W YDL012CQ12489 107 aa3.44□□□□□ -1.86
SSU72YNL222W MMS4P38257 691 aa3.43□□□□□ -1.86
SSU72YNL222W SBE22P38814 852 aa3.43□□□□□ -1.86
SSU72YNL222W MTQ1P53944 314 aa3.43□□□□□ -1.86
SSU72YNL222W MDM1Q01846 1127 aa3.43□□□□□ -1.86
SSU72YNL222W ADA2Q02336 434 aa3.43□□□□□ -1.86
SSU72YNL222W URA4P20051 364 aa3.42□□□□□ -1.86
SSU72YNL222W YBR056WP38081 501 aa3.42□□□□□ -1.86
SSU72YNL222W CHK1P38147 527 aa3.42□□□□□ -1.86
SSU72YNL222W MIG3P39943 394 aa3.42□□□□□ -1.86
SSU72YNL222W YIL029CP40538 142 aa3.42□□□□□ -1.86
SSU72YNL222W KAP120Q02932 1032 aa3.42□□□□□ -1.86
SSU72YNL222W ROY1Q04847 553 aa3.42□□□□□ -1.86
SSU72YNL222W IMA3P0CW40 589 aa3.41□□□□□ -1.86
SSU72YNL222W IMA4P0CW41 589 aa3.41□□□□□ -1.86
SSU72YNL222W REC107P21651 314 aa3.41□□□□□ -1.86
SSU72YNL222W PES4P39684 611 aa3.41□□□□□ -1.86
SSU72YNL222W YGR250CP53316 781 aaKnown RBP3.41□□□□□ -1.86
SSU72YNL222W OCA2P53949 197 aa3.41□□□□□ -1.86
SSU72YNL222W DON1Q05610 365 aa3.41□□□□□ -1.86
SSU72YNL222W IMA2Q08295 589 aa3.41□□□□□ -1.86
SSU72YNL222W SFI1Q12369 946 aa3.41□□□□□ -1.86
SSU72YNL222W SNU66Q12420 587 aaPredicted RBP3.41□□□□□ -1.86
SSU72YNL222W OPI1P21957 404 aa3.4□□□□□ -1.87
SSU72YNL222W YCL068CP25593 260 aa3.4□□□□□ -1.87
SSU72YNL222W YCR051WP25631 222 aa3.4□□□□□ -1.87
SSU72YNL222W CBF5P33322 483 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
SSU72YNL222W BLI1P35727 113 aa3.4□□□□□ -1.87
SSU72YNL222W LSM5P40089 93 aaKnown RBP3.4□□□□□ -1.87
SSU72YNL222W AIM20P40451 204 aa3.4□□□□□ -1.87
SSU72YNL222W YMR130WQ04223 302 aa3.4□□□□□ -1.87
SSU72YNL222W DCS1Q06151 350 aa3.4□□□□□ -1.87
SSU72YNL222W RRG1Q12167 365 aaPredicted RBP3.4□□□□□ -1.87
SSU72YNL222W TPT1Q12272 230 aaKnown RBP3.4□□□□□ -1.87
SSU72YNL222W ATG34Q12292 412 aa3.4□□□□□ -1.87
SSU72YNL222W SCM3Q12334 223 aa3.4□□□□□ -1.87
SSU72YNL222W ERP4Q12450 207 aa3.4□□□□□ -1.87
SSU72YNL222W AFI1Q99222 893 aa3.4□□□□□ -1.87
SSU72YNL222W HOM3P10869 527 aa3.39□□□□□ -1.87
SSU72YNL222W BRF1P29056 596 aa3.39□□□□□ -1.87
SSU72YNL222W DEP1P31385 405 aa3.39□□□□□ -1.87
SSU72YNL222W LTV1P34078 463 aa3.39□□□□□ -1.87
SSU72YNL222W RTC2P38279 296 aa3.39□□□□□ -1.87
SSU72YNL222W COX14P39103 70 aa3.39□□□□□ -1.87
SSU72YNL222W NOC2P39744 710 aaKnown RBP3.39□□□□□ -1.87
SSU72YNL222W BNI5P53890 448 aaKnown RBP3.39□□□□□ -1.87
SSU72YNL222W CCE1Q03702 353 aa3.39□□□□□ -1.87
SSU72YNL222W SNT309Q06091 175 aaPredicted RBP3.39□□□□□ -1.87
SSU72YNL222W RIF2Q06208 395 aa3.39□□□□□ -1.87
SSU72YNL222W RAX1Q08760 435 aa3.39□□□□□ -1.87
SSU72YNL222W SMF3Q12078 473 aaPredicted RBP3.39□□□□□ -1.87
SSU72YNL222W FUR1P18562 216 aaKnown RBP3.38□□□□□ -1.87
SSU72YNL222W RRP1P35178 278 aaPredicted RBP3.38□□□□□ -1.87
SSU72YNL222W BYE1P36106 594 aa3.38□□□□□ -1.87
SSU72YNL222W DFG10P40526 253 aa3.38□□□□□ -1.87
SSU72YNL222W MRM2P53123 320 aa3.38□□□□□ -1.87
SSU72YNL222W APJ1P53940 528 aa3.38□□□□□ -1.87
SSU72YNL222W ACL4Q03771 387 aa3.38□□□□□ -1.87
SSU72YNL222W LIP2Q06005 328 aa3.38□□□□□ -1.87
SSU72YNL222W JID1Q12350 301 aa3.38□□□□□ -1.87
SSU72YNL222W CEX1Q12453 761 aa3.38□□□□□ -1.87
SSU72YNL222W CHD1P32657 1468 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms