RNA–Protein interactions for RNA: YNL007C

SIS1, Transcript of Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, yeast

Gene SIS1, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS1	YNL007C	RHO3	Q00245	231 aa	Known RBP	11.72	□□□□□ -0.53
SIS1	YNL007C	YPR022C	Q12139	1133 aa		11.72	□□□□□ -0.53
SIS1	YNL007C	CDC4	P07834	779 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	FUR1	P18562	216 aa	Known RBP	11.71	□□□□□ -0.53
SIS1	YNL007C	MRPL6	P32904	214 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	LHP1	P33399	275 aa	Known RBP	11.71	□□□□□ -0.53
SIS1	YNL007C	SCO2	P38072	301 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	BNA4	P38169	460 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	APE4	P38821	490 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	YHR177W	P38867	453 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	LYS1	P38998	373 aa	RIP-Chip data	11.71	□□□□□ -0.53	not detected
SIS1	YNL007C	CEM1	P39525	442 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	ELO1	P39540	310 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	AIM2	P39721	246 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	LYS12	P40495	371 aa	Known RBP	11.71	□□□□□ -0.53
SIS1	YNL007C	GLE1	Q12315	538 aa		11.71	□□□□□ -0.53
SIS1	YNL007C	MF(ALPHA)1	P01149	165 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	CBS2	P14905	389 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	BUB3	P26449	341 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	RPC82	P32349	654 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	ZTA1	P38230	334 aa	Known RBP	11.7	□□□□□ -0.54
SIS1	YNL007C	SSZ1	P38788	538 aa	Known RBP	11.7	□□□□□ -0.54
SIS1	YNL007C	QDR2	P40474	542 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	NEO1	P40527	1151 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	MSS2	P40990	351 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	YFL066C	P43538	392 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	HXT16	P47185	567 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	CSL4	P53859	292 aa	Predicted RBP	11.7	□□□□□ -0.54
SIS1	YNL007C	SWS2	P53937	143 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	HXT15	P54854	567 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	YAT1	P80235	687 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	TRM82	Q03774	444 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	SMP3	Q04174	516 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	BOP2	Q06150	570 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	PUS9	Q12069	462 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	RTK1	Q12100	620 aa	Predicted RBP	11.7	□□□□□ -0.54
SIS1	YNL007C	RIB3	Q99258	208 aa		11.7	□□□□□ -0.54
SIS1	YNL007C	HTS1	P07263	546 aa	Known RBP	11.69	□□□□□ -0.54
SIS1	YNL007C	RPS1B	P23248	255 aa	Known RBP	11.69	□□□□□ -0.54
SIS1	YNL007C	RPL5	P26321	297 aa	Known RBP	11.69	□□□□□ -0.54
SIS1	YNL007C	FMP46	P36141	133 aa	Known RBP	11.69	□□□□□ -0.54
SIS1	YNL007C	ATG14	P38270	344 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	EHT1	P38295	451 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	YHR112C	P38716	378 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	OCA5	P38738	679 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	MTG2	P38860	518 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	PTC2	P39966	464 aa	Known RBP	11.69	□□□□□ -0.54
SIS1	YNL007C	FAU1	P40099	211 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	YPS6	P40583	537 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	MRPS18	P42847	217 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	EGD1	Q02642	157 aa	Known RBP	11.69	□□□□□ -0.54
SIS1	YNL007C	YML096W	Q04489	525 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	APC4	Q04601	652 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	XYL2	Q07993	356 aa		11.69	□□□□□ -0.54
SIS1	YNL007C	DBP3	P20447	523 aa	Known RBP	11.68	□□□□□ -0.54
SIS1	YNL007C	SFA1	P32771	386 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	ECM8	P38246	354 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	LRO1	P40345	661 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	YGR201C	P42936	225 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	CAK1	P43568	368 aa	Predicted RBP	11.68	□□□□□ -0.54
SIS1	YNL007C	CIS3	P47001	227 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	DAM1	P53267	343 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	SWP1	Q02795	286 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	YDR179W-A	Q03983	463 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	THI73	Q07904	523 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	YLR126C	Q12288	251 aa		11.68	□□□□□ -0.54
SIS1	YNL007C	PUT2	P07275	575 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	GAL7	P08431	366 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	NTH1	P32356	751 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	NUF2	P33895	451 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	HCS1	P34243	683 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	FHN1	P53279	174 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	YGR250C	P53316	781 aa	Known RBP	11.67	□□□□□ -0.54
SIS1	YNL007C	ESF2	P53743	316 aa	Known RBP	11.67	□□□□□ -0.54
SIS1	YNL007C	YPL107W	Q02873	248 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	RSN1	Q03516	953 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	KRE28	Q04431	385 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	YOL107W	Q12239	342 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	SFM1	Q12314	213 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	MHF1	Q3E835	90 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	TSC13	Q99190	310 aa		11.67	□□□□□ -0.54
SIS1	YNL007C	PNO1	Q99216	274 aa	Known RBP	11.67	□□□□□ -0.54
SIS1	YNL007C	TPK3	P05986	398 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	SNF5	P18480	905 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	GSH1	P32477	678 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	MKK1	P32490	508 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	CDC13	P32797	924 aa	Known RBP	11.66	□□□□□ -0.54
SIS1	YNL007C	YKR015C	P36111	568 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	AVT6	P40074	448 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	COG3	P40094	801 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	PRM8	P53174	237 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	YGR079W	P53249	370 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	DCI1	Q08558	271 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	DIN7	Q12086	430 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	LAG2	Q92325	660 aa		11.66	□□□□□ -0.54
SIS1	YNL007C	BRR2	P32639	2163 aa	Known RBP	11.65	□□□□□ -0.54
SIS1	YNL007C	ZWF1	P11412	505 aa	Known RBP	11.65	□□□□□ -0.54
SIS1	YNL007C	TRM1	P15565	570 aa	Known RBP	11.65	□□□□□ -0.54
SIS1	YNL007C	PTP1	P25044	335 aa		11.65	□□□□□ -0.54
SIS1	YNL007C	RHB1	P25378	209 aa		11.65	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms