RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W POX1P13711 748 aa3.66□□□□□ -1.82
ECM16YMR128W HSP30P25619 332 aa3.66□□□□□ -1.82
ECM16YMR128W ASF2P32448 525 aaPredicted RBP3.66□□□□□ -1.82
ECM16YMR128W LIP5P32875 414 aa3.66□□□□□ -1.82
ECM16YMR128W FTH1P38310 465 aa3.66□□□□□ -1.82
ECM16YMR128W AFG3P39925 761 aa3.66□□□□□ -1.82
ECM16YMR128W MEP1P40260 492 aa3.66□□□□□ -1.82
ECM16YMR128W NIT2P47016 307 aa3.66□□□□□ -1.82
ECM16YMR128W YAT1P80235 687 aa3.66□□□□□ -1.82
ECM16YMR128W CDC14Q00684 551 aa3.66□□□□□ -1.82
ECM16YMR128W HER2Q03557 464 aa3.66□□□□□ -1.82
ECM16YMR128W RGC1Q06108 1083 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W VTA1Q06263 330 aa3.66□□□□□ -1.82
ECM16YMR128W LCB4Q12246 624 aa3.66□□□□□ -1.82
ECM16YMR128W YGR161W-CQ3E744 92 aa3.66□□□□□ -1.82
ECM16YMR128W RPS9AO13516 197 aaKnown RBP3.65□□□□□ -1.82
ECM16YMR128W PHO5P00635 467 aa3.65□□□□□ -1.82
ECM16YMR128W LEU4P06208 619 aaKnown RBP3.65□□□□□ -1.82
ECM16YMR128W SPT3P06844 337 aa3.65□□□□□ -1.82
ECM16YMR128W CDC26P14724 124 aa3.65□□□□□ -1.82
ECM16YMR128W AAT2P23542 418 aaKnown RBP3.65□□□□□ -1.82
ECM16YMR128W FPS1P23900 669 aa3.65□□□□□ -1.82
ECM16YMR128W GRR1P24814 1151 aa3.65□□□□□ -1.82
ECM16YMR128W CHA1P25379 360 aaKnown RBP3.65□□□□□ -1.82
ECM16YMR128W RSA4P25382 515 aaKnown RBP3.65□□□□□ -1.82
ECM16YMR128W CSE2P33308 149 aa3.65□□□□□ -1.82
ECM16YMR128W DRE2P36152 348 aa3.65□□□□□ -1.82
ECM16YMR128W GRE3P38715 327 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
ECM16YMR128W PRE6P40303 254 aaKnown RBP3.65□□□□□ -1.82
ECM16YMR128W SPC98P53540 846 aa3.65□□□□□ -1.82
ECM16YMR128W PFA5Q03289 374 aa3.65□□□□□ -1.82
ECM16YMR128W YDR132CQ03900 495 aa3.65□□□□□ -1.82
ECM16YMR128W ATG33Q06485 197 aa3.65□□□□□ -1.82
ECM16YMR128W GIC2Q06648 383 aa3.65□□□□□ -1.82
ECM16YMR128W SYO1Q07395 620 aa3.65□□□□□ -1.82
ECM16YMR128W YDL121CQ07541 149 aa3.65□□□□□ -1.82
ECM16YMR128W MCA1Q08601 432 aa3.65□□□□□ -1.82
ECM16YMR128W ATG34Q12292 412 aa3.65□□□□□ -1.82
ECM16YMR128W YDR061WQ12298 539 aa3.65□□□□□ -1.82
ECM16YMR128W CBP2P03874 630 aaPredicted RBP3.65□□□□□ -1.83
ECM16YMR128W SIR3P06701 978 aa3.65□□□□□ -1.83
ECM16YMR128W PDE2P06776 526 aa3.65□□□□□ -1.83
ECM16YMR128W RPB4P20433 221 aaPredicted RBP3.65□□□□□ -1.83
ECM16YMR128W RBK1P25332 333 aa3.65□□□□□ -1.83
ECM16YMR128W ALY1P36117 915 aa3.65□□□□□ -1.83
ECM16YMR128W SLX1P38324 304 aa3.65□□□□□ -1.83
ECM16YMR128W YBR242WP38331 238 aa3.65□□□□□ -1.83
ECM16YMR128W PAC11P40960 533 aa3.65□□□□□ -1.83
ECM16YMR128W SSU1P41930 458 aa3.65□□□□□ -1.83
ECM16YMR128W QRI7P43122 407 aa3.65□□□□□ -1.83
ECM16YMR128W TPN1P53099 579 aa3.65□□□□□ -1.83
ECM16YMR128W YGR168CP53293 376 aa3.65□□□□□ -1.83
ECM16YMR128W CAF120P53836 1060 aa3.65□□□□□ -1.83
ECM16YMR128W ELA1P53861 379 aaPredicted RBP3.65□□□□□ -1.83
ECM16YMR128W PET117Q02771 107 aa3.65□□□□□ -1.83
ECM16YMR128W DML1Q03652 475 aa3.65□□□□□ -1.83
ECM16YMR128W RSC3Q06639 885 aa3.65□□□□□ -1.83
ECM16YMR128W RAD34Q06665 692 aa3.65□□□□□ -1.83
ECM16YMR128W PLB3Q08108 686 aa3.65□□□□□ -1.83
ECM16YMR128W STE3P06783 470 aa3.65□□□□□ -1.83
ECM16YMR128W YKR051WP36142 418 aa3.65□□□□□ -1.83
ECM16YMR128W FAT1P38225 669 aa3.65□□□□□ -1.83
ECM16YMR128W YBR137WP38276 179 aa3.65□□□□□ -1.83
ECM16YMR128W LEU5P38702 357 aa3.65□□□□□ -1.83
ECM16YMR128W YHR202WP38887 602 aa3.65□□□□□ -1.83
ECM16YMR128W PMT4P46971 762 aa3.65□□□□□ -1.83
ECM16YMR128W IRC18P47056 224 aa3.65□□□□□ -1.83
ECM16YMR128W YJR096WP47137 282 aa3.65□□□□□ -1.83
ECM16YMR128W STR3P53101 465 aaKnown RBP3.65□□□□□ -1.83
ECM16YMR128W MET14Q02196 202 aa3.65□□□□□ -1.83
ECM16YMR128W SMA1Q02651 245 aa3.65□□□□□ -1.83
ECM16YMR128W MET31Q03081 177 aa3.65□□□□□ -1.83
ECM16YMR128W EFR3Q03653 782 aaKnown RBP3.65□□□□□ -1.83
ECM16YMR128W YDR444WQ04093 687 aa3.65□□□□□ -1.83
ECM16YMR128W HPF1Q05164 967 aa3.65□□□□□ -1.83
ECM16YMR128W THP1Q08231 455 aa3.65□□□□□ -1.83
ECM16YMR128W APC5Q08683 685 aa3.65□□□□□ -1.83
ECM16YMR128W NDD1Q08887 554 aa3.65□□□□□ -1.83
ECM16YMR128W SEN2P16658 377 aa3.64□□□□□ -1.83
ECM16YMR128W COX13P32799 129 aa3.64□□□□□ -1.83
ECM16YMR128W LST4P34239 828 aa3.64□□□□□ -1.83
ECM16YMR128W APM3P38153 483 aa3.64□□□□□ -1.83
ECM16YMR128W STB5P38699 743 aa3.64□□□□□ -1.83
ECM16YMR128W RRP4P38792 359 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W VRG4P40107 337 aa3.64□□□□□ -1.83
ECM16YMR128W YIR016WP40572 265 aa3.64□□□□□ -1.83
ECM16YMR128W YNL181WP53878 407 aa3.64□□□□□ -1.83
ECM16YMR128W SPP2Q02521 185 aa3.64□□□□□ -1.83
ECM16YMR128W AIM32Q04689 311 aa3.64□□□□□ -1.83
ECM16YMR128W UAF30Q08747 228 aa3.64□□□□□ -1.83
ECM16YMR128W YDL109CQ12103 647 aa3.64□□□□□ -1.83
ECM16YMR128W MDM32Q12171 622 aa3.64□□□□□ -1.83
ECM16YMR128W AHA1Q12449 350 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W KAR1P11927 433 aa3.64□□□□□ -1.83
ECM16YMR128W MSS51P32335 436 aa3.64□□□□□ -1.83
ECM16YMR128W CAT2P32796 670 aaKnown RBP3.64□□□□□ -1.83
ECM16YMR128W APT2P36973 181 aa3.64□□□□□ -1.83
ECM16YMR128W ATG14P38270 344 aa3.64□□□□□ -1.83
ECM16YMR128W YHR045WP38775 560 aa3.64□□□□□ -1.83
ECM16YMR128W MNN9P39107 395 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms