RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W VAM3Q12241 283 aa2.2□□□□□ -2.06
CTK3YML112W SFI1Q12369 946 aa2.2□□□□□ -2.06
CTK3YML112W YOL159C-AQ3E769 90 aa2.2□□□□□ -2.06
CTK3YML112W PRR1P28708 518 aa2.19□□□□□ -2.06
CTK3YML112W HIR2P32480 875 aa2.19□□□□□ -2.06
CTK3YML112W SAS3P34218 831 aa2.19□□□□□ -2.06
CTK3YML112W SBE22P38814 852 aa2.19□□□□□ -2.06
CTK3YML112W COX14P39103 70 aa2.19□□□□□ -2.06
CTK3YML112W SRL2Q12020 392 aa2.19□□□□□ -2.06
CTK3YML112W SNU66Q12420 587 aaPredicted RBP2.19□□□□□ -2.06
CTK3YML112W RTN2Q12443 393 aa2.19□□□□□ -2.06
CTK3YML112W YBL111CQ3E7Y5 667 aa2.19□□□□□ -2.06
CTK3YML112W INH1P01097 85 aa2.18□□□□□ -2.06
CTK3YML112W RRP1P35178 278 aaPredicted RBP2.18□□□□□ -2.06
CTK3YML112W SPT10P35208 640 aa2.18□□□□□ -2.06
CTK3YML112W ATP3P38077 311 aaKnown RBP2.18□□□□□ -2.06
CTK3YML112W CHK1P38147 527 aa2.18□□□□□ -2.06
CTK3YML112W RTC2P38279 296 aa2.18□□□□□ -2.06
CTK3YML112W YFR057WP43625 151 aa2.18□□□□□ -2.06
CTK3YML112W PHO86P46956 311 aa2.18□□□□□ -2.06
CTK3YML112W VHS1Q03785 461 aa2.18□□□□□ -2.06
CTK3YML112W COG4Q06096 861 aa2.18□□□□□ -2.06
CTK3YML112W MED2Q12124 431 aa2.18□□□□□ -2.06
CTK3YML112W BUG1Q12191 341 aa2.18□□□□□ -2.06
CTK3YML112W TPT1Q12272 230 aaKnown RBP2.18□□□□□ -2.06
CTK3YML112W SCEIP03882 235 aa2.17□□□□□ -2.06
CTK3YML112W MSI1P13712 422 aa2.17□□□□□ -2.06
CTK3YML112W AAT2P23542 418 aaKnown RBP2.17□□□□□ -2.06
CTK3YML112W YCL068CP25593 260 aa2.17□□□□□ -2.06
CTK3YML112W RPN12P32496 274 aa2.17□□□□□ -2.06
CTK3YML112W YME2P32843 850 aa2.17□□□□□ -2.06
CTK3YML112W MAM33P40513 266 aa2.17□□□□□ -2.06
CTK3YML112W BIR1P47134 954 aa2.17□□□□□ -2.06
CTK3YML112W MKC7P53379 596 aa2.17□□□□□ -2.06
CTK3YML112W LIP2Q06005 328 aa2.17□□□□□ -2.06
CTK3YML112W CEX1Q12453 761 aa2.17□□□□□ -2.06
CTK3YML112W FAB1P34756 2278 aa2.16□□□□□ -2.06
CTK3YML112W YRF1-4O13559 1382 aa2.16□□□□□ -2.06
CTK3YML112W PSK1P31374 1356 aa2.16□□□□□ -2.06
CTK3YML112W RPB5P20434 215 aa2.16□□□□□ -2.06
CTK3YML112W ERG3P32353 365 aa2.16□□□□□ -2.06
CTK3YML112W JNM1P36224 373 aa2.16□□□□□ -2.06
CTK3YML112W RRN10P38204 145 aa2.16□□□□□ -2.06
CTK3YML112W RRP4P38792 359 aaKnown RBP2.16□□□□□ -2.06
CTK3YML112W NAB3P38996 802 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
CTK3YML112W SEO1P39709 593 aa2.16□□□□□ -2.06
CTK3YML112W OXA1P39952 402 aa2.16□□□□□ -2.06
CTK3YML112W NDE1P40215 560 aa2.16□□□□□ -2.06
CTK3YML112W HAC1P41546 238 aa2.16□□□□□ -2.06
CTK3YML112W MRM2P53123 320 aa2.16□□□□□ -2.06
CTK3YML112W SKO1Q02100 647 aa2.16□□□□□ -2.06
CTK3YML112W CCE1Q03702 353 aa2.16□□□□□ -2.06
CTK3YML112W TAF11Q04226 346 aa2.16□□□□□ -2.06
CTK3YML112W DON1Q05610 365 aa2.16□□□□□ -2.06
CTK3YML112W YLR287CQ05881 355 aa2.16□□□□□ -2.06
CTK3YML112W RIF2Q06208 395 aa2.16□□□□□ -2.06
CTK3YML112W RAX1Q08760 435 aa2.16□□□□□ -2.06
CTK3YML112W YGK3Q12222 375 aaPredicted RBP2.16□□□□□ -2.06
CTK3YML112W HTZ1Q12692 134 aaKnown RBP2.16□□□□□ -2.06
CTK3YML112W PHA2P32452 334 aa2.15□□□□□ -2.07
CTK3YML112W IES6P32617 166 aa2.15□□□□□ -2.07
CTK3YML112W TFB1P32776 642 aa2.15□□□□□ -2.07
CTK3YML112W SIM1P40472 476 aa2.15□□□□□ -2.07
CTK3YML112W CRH1P53301 507 aa2.15□□□□□ -2.07
CTK3YML112W KAP120Q02932 1032 aa2.15□□□□□ -2.07
CTK3YML112W ARX1Q03862 593 aaKnown RBP2.15□□□□□ -2.07
CTK3YML112W ECM11Q04110 302 aa2.15□□□□□ -2.07
CTK3YML112W YMR130WQ04223 302 aa2.15□□□□□ -2.07
CTK3YML112W LOT6Q07923 191 aa2.15□□□□□ -2.07
CTK3YML112W YPQ1Q12010 308 aa2.15□□□□□ -2.07
CTK3YML112W SMF3Q12078 473 aaPredicted RBP2.15□□□□□ -2.07
CTK3YML112W ATG34Q12292 412 aa2.15□□□□□ -2.07
CTK3YML112W FUR1P18562 216 aaKnown RBP2.14□□□□□ -2.07
CTK3YML112W URA4P20051 364 aa2.14□□□□□ -2.07
CTK3YML112W BRF1P29056 596 aa2.14□□□□□ -2.07
CTK3YML112W BAT1P38891 393 aaKnown RBP2.14□□□□□ -2.07
CTK3YML112W YER186CP40101 306 aa2.14□□□□□ -2.07
CTK3YML112W BNS1P50084 137 aa2.14□□□□□ -2.07
CTK3YML112W MST27P53176 234 aa2.14□□□□□ -2.07
CTK3YML112W MRPS16Q02608 121 aa2.14□□□□□ -2.07
CTK3YML112W URH1Q04179 340 aa2.14□□□□□ -2.07
CTK3YML112W YET2Q04210 160 aa2.14□□□□□ -2.07
CTK3YML112W RTN1Q04947 295 aaKnown RBP2.14□□□□□ -2.07
CTK3YML112W CMS1Q07897 291 aaKnown RBP2.14□□□□□ -2.07
CTK3YML112W SMC5Q08204 1093 aa2.14□□□□□ -2.07
CTK3YML112W BUD21Q08492 214 aaPredicted RBP2.14□□□□□ -2.07
CTK3YML112W EAF3Q12432 401 aa2.14□□□□□ -2.07
CTK3YML112W COX4P04037 155 aa2.13□□□□□ -2.07
CTK3YML112W MRPS9P38120 278 aa2.13□□□□□ -2.07
CTK3YML112W OM14P38325 134 aa2.13□□□□□ -2.07
CTK3YML112W GPD2P41911 440 aaKnown RBP2.13□□□□□ -2.07
CTK3YML112W AIM24P47127 394 aa2.13□□□□□ -2.07
CTK3YML112W MMT1Q03218 510 aa2.13□□□□□ -2.07
CTK3YML112W PRM6Q04705 352 aa2.13□□□□□ -2.07
CTK3YML112W SNT309Q06091 175 aaPredicted RBP2.13□□□□□ -2.07
CTK3YML112W RRP9Q06506 573 aaKnown RBP2.13□□□□□ -2.07
CTK3YML112W MDM36Q06820 579 aa2.13□□□□□ -2.07
CTK3YML112W PGA3Q12746 312 aaKnown RBP2.13□□□□□ -2.07
CTK3YML112W CCH1P50077 2039 aa2.13□□□□□ -2.07
CTK3YML112W PIS1P06197 220 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms