RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C ICT1Q12385 394 aa11.82□□□□□ -0.52
BDF1YLR399C PRI2P20457 528 aa11.81□□□□□ -0.52
BDF1YLR399C RRF1P38771 230 aa11.81□□□□□ -0.52
BDF1YLR399C MDM31P38880 579 aa11.81□□□□□ -0.52
BDF1YLR399C YHR202WP38887 602 aa11.81□□□□□ -0.52
BDF1YLR399C YAE1P47118 141 aaPredicted RBP11.81□□□□□ -0.52
BDF1YLR399C YMR321CQ04898 105 aa11.81□□□□□ -0.52
BDF1YLR399C RRT8Q08219 342 aa11.81□□□□□ -0.52
BDF1YLR399C LYS21Q12122 440 aaKnown RBP11.81□□□□□ -0.52
BDF1YLR399C PUF2Q12221 1075 aaKnown RBP RIP-Chip data11.81□□□□□ -0.52 RIP-Chip
BDF1YLR399C SPT3P06844 337 aa11.8□□□□□ -0.52
BDF1YLR399C GAP1P19145 602 aaPredicted RBP11.8□□□□□ -0.52
BDF1YLR399C PHO80P20052 293 aa11.8□□□□□ -0.52
BDF1YLR399C RER1P25560 188 aa11.8□□□□□ -0.52
BDF1YLR399C CWH43P25618 953 aa11.8□□□□□ -0.52
BDF1YLR399C MRPL40P36534 297 aa11.8□□□□□ -0.52
BDF1YLR399C STB5P38699 743 aa11.8□□□□□ -0.52
BDF1YLR399C PEX29Q03370 554 aa11.8□□□□□ -0.52
BDF1YLR399C HIS1P00498 297 aaKnown RBP11.8□□□□□ -0.52
BDF1YLR399C YIH1P25637 258 aa11.8□□□□□ -0.52
BDF1YLR399C SSU1P41930 458 aa11.8□□□□□ -0.52
BDF1YLR399C TIS11P47977 285 aa11.8□□□□□ -0.52
BDF1YLR399C BRE5P53741 515 aaKnown RBP11.8□□□□□ -0.52
BDF1YLR399C TIM44Q01852 431 aa11.8□□□□□ -0.52
BDF1YLR399C UNG1P12887 359 aa11.79□□□□□ -0.52
BDF1YLR399C LYP1P32487 611 aa11.79□□□□□ -0.52
BDF1YLR399C EDC3P39998 551 aaKnown RBP11.79□□□□□ -0.52
BDF1YLR399C GDS1P41913 522 aa11.79□□□□□ -0.52
BDF1YLR399C ERV29P53337 310 aa11.79□□□□□ -0.52
BDF1YLR399C MSC2Q03455 724 aa11.79□□□□□ -0.52
BDF1YLR399C SNX41Q04053 625 aa11.79□□□□□ -0.52
BDF1YLR399C TY1A-DR3Q12441 440 aa11.79□□□□□ -0.52
BDF1YLR399C ECM29P38737 1868 aa11.79□□□□□ -0.52
BDF1YLR399C SIR1P21691 654 aa11.79□□□□□ -0.52
BDF1YLR399C VPS51P36116 164 aa11.79□□□□□ -0.52
BDF1YLR399C APM3P38153 483 aa11.79□□□□□ -0.52
BDF1YLR399C GID8P40208 455 aa11.79□□□□□ -0.52
BDF1YLR399C AIM22P47051 409 aa11.79□□□□□ -0.52
BDF1YLR399C JJJ3P47138 172 aa11.79□□□□□ -0.52
BDF1YLR399C SOK2P53438 785 aaPredicted RBP11.79□□□□□ -0.52
BDF1YLR399C YLR352WQ06479 807 aa11.79□□□□□ -0.52
BDF1YLR399C MED4Q12343 284 aa11.79□□□□□ -0.52
BDF1YLR399C ARP7Q12406 477 aa11.79□□□□□ -0.52
BDF1YLR399C YEL009C-AA0A023PZF2 135 aa11.78□□□□□ -0.52
BDF1YLR399C HTA1P04911 132 aaKnown RBP11.78□□□□□ -0.52
BDF1YLR399C FUS3P16892 353 aaKnown RBP11.78□□□□□ -0.52
BDF1YLR399C CKS1P20486 150 aaKnown RBP11.78□□□□□ -0.52
BDF1YLR399C MNE1P24720 663 aa11.78□□□□□ -0.52
BDF1YLR399C PGS1P25578 521 aa11.78□□□□□ -0.52
BDF1YLR399C VPS17P32913 551 aa11.78□□□□□ -0.52
BDF1YLR399C MBP1P39678 833 aa11.78□□□□□ -0.52
BDF1YLR399C HMS2P47175 358 aa11.78□□□□□ -0.52
BDF1YLR399C AAD10P47182 288 aa11.78□□□□□ -0.52
BDF1YLR399C SHY1P53266 389 aa11.78□□□□□ -0.52
BDF1YLR399C ERV25P54837 211 aaKnown RBP11.78□□□□□ -0.52
BDF1YLR399C YDR541CQ03049 344 aa11.78□□□□□ -0.52
BDF1YLR399C SPG3Q04398 127 aaPredicted RBP11.78□□□□□ -0.52
BDF1YLR399C SLH1P53327 1967 aaKnown RBP11.77□□□□□ -0.52
BDF1YLR399C GAL1P04385 528 aa11.77□□□□□ -0.52
BDF1YLR399C ATP4P05626 244 aa11.77□□□□□ -0.52
BDF1YLR399C NAR1P23503 491 aaKnown RBP11.77□□□□□ -0.52
BDF1YLR399C ACB1P31787 87 aa11.77□□□□□ -0.52
BDF1YLR399C SNU114P36048 1008 aaKnown RBP11.77□□□□□ -0.52
BDF1YLR399C VPS29P38759 282 aa11.77□□□□□ -0.52
BDF1YLR399C PMT4P46971 762 aa11.77□□□□□ -0.52
BDF1YLR399C NET1P47035 1189 aa11.77□□□□□ -0.52
BDF1YLR399C IMO32P53219 342 aa11.77□□□□□ -0.52
BDF1YLR399C YOR283WQ12040 230 aaKnown RBP11.77□□□□□ -0.52
BDF1YLR399C AEP3Q12089 606 aa11.77□□□□□ -0.52
BDF1YLR399C SVS1Q12254 260 aa11.77□□□□□ -0.52
BDF1YLR399C REP2P03872 296 aa11.77□□□□□ -0.53
BDF1YLR399C BIT61P47041 543 aa11.77□□□□□ -0.53
BDF1YLR399C LSM8P47093 109 aaKnown RBP11.77□□□□□ -0.53
BDF1YLR399C YMR087WQ04299 284 aa11.77□□□□□ -0.53
BDF1YLR399C VPS74Q06385 345 aa11.77□□□□□ -0.53
BDF1YLR399C FRE5Q08908 694 aa11.77□□□□□ -0.53
BDF1YLR399C LAT1P12695 482 aaKnown RBP11.76□□□□□ -0.53
BDF1YLR399C HOM6P31116 359 aaKnown RBP11.76□□□□□ -0.53
BDF1YLR399C SRY1P36007 326 aa11.76□□□□□ -0.53
BDF1YLR399C MAK5P38112 773 aaPredicted RBP11.76□□□□□ -0.53
BDF1YLR399C CDC1P40986 491 aa11.76□□□□□ -0.53
BDF1YLR399C CHA4P43634 648 aa11.76□□□□□ -0.53
BDF1YLR399C MET31Q03081 177 aa11.76□□□□□ -0.53
BDF1YLR399C YMR279CQ03263 540 aa11.76□□□□□ -0.53
BDF1YLR399C YML020WQ03722 664 aa11.76□□□□□ -0.53
BDF1YLR399C TPO3Q06451 622 aa11.76□□□□□ -0.53
BDF1YLR399C YRM1Q12340 786 aa11.76□□□□□ -0.53
BDF1YLR399C RPP1BP10622 106 aaKnown RBP11.75□□□□□ -0.53
BDF1YLR399C PRP2P20095 876 aaPredicted RBP11.75□□□□□ -0.53
BDF1YLR399C PRP28P23394 588 aa11.75□□□□□ -0.53
BDF1YLR399C MKS1P34072 584 aa11.75□□□□□ -0.53
BDF1YLR399C BUR6P40096 142 aa11.75□□□□□ -0.53
BDF1YLR399C SNG1P46950 547 aa11.75□□□□□ -0.53
BDF1YLR399C KIN4Q01919 800 aa11.75□□□□□ -0.53
BDF1YLR399C CRR1Q05790 422 aa11.75□□□□□ -0.53
BDF1YLR399C GRX8Q05926 109 aa11.75□□□□□ -0.53
BDF1YLR399C BUR2Q05949 395 aa11.75□□□□□ -0.53
BDF1YLR399C ARR2Q06597 130 aa11.75□□□□□ -0.53
BDF1YLR399C SKI7Q08491 747 aaPredicted RBP11.75□□□□□ -0.53
BDF1YLR399C Q0010Q9ZZX9 128 aa11.75□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms