RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W ARD1P07347 238 aaPredicted RBP3.46□□□□□ -1.86
LCB5YLR260W PMA2P19657 947 aa3.46□□□□□ -1.86
LCB5YLR260W SEC62P21825 274 aa3.46□□□□□ -1.86
LCB5YLR260W ADH7P25377 361 aa3.46□□□□□ -1.86
LCB5YLR260W IDH2P28241 369 aaKnown RBP3.46□□□□□ -1.86
LCB5YLR260W BEM1P29366 551 aa3.46□□□□□ -1.86
LCB5YLR260W YMC2P38087 329 aa3.46□□□□□ -1.86
LCB5YLR260W FAD1P38913 306 aa3.46□□□□□ -1.86
LCB5YLR260W GID8P40208 455 aa3.46□□□□□ -1.86
LCB5YLR260W FKH2P41813 862 aa3.46□□□□□ -1.86
LCB5YLR260W ABM1P47146 123 aa3.46□□□□□ -1.86
LCB5YLR260W COS5P47187 383 aa3.46□□□□□ -1.86
LCB5YLR260W RMR1P53060 241 aa3.46□□□□□ -1.86
LCB5YLR260W MPS2P53159 387 aa3.46□□□□□ -1.86
LCB5YLR260W COP1P53622 1201 aaKnown RBP3.46□□□□□ -1.86
LCB5YLR260W YPL108WQ02872 168 aaPredicted RBP3.46□□□□□ -1.86
LCB5YLR260W INA17Q02888 182 aa3.46□□□□□ -1.86
LCB5YLR260W ELP3Q02908 557 aaKnown RBP3.46□□□□□ -1.86
LCB5YLR260W YDR222WQ04925 415 aa3.46□□□□□ -1.86
LCB5YLR260W YML053CQ04978 212 aa3.46□□□□□ -1.86
LCB5YLR260W YDR278CQ05612 105 aa3.46□□□□□ -1.86
LCB5YLR260W VPS36Q06696 566 aa3.46□□□□□ -1.86
LCB5YLR260W FMP40Q08968 688 aaPredicted RBP3.46□□□□□ -1.86
LCB5YLR260W RLM1Q12224 676 aa3.46□□□□□ -1.86
LCB5YLR260W CYC7P00045 113 aa3.45□□□□□ -1.86
LCB5YLR260W TEF1P02994 458 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W PAB1P04147 577 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
LCB5YLR260W CDC33P07260 213 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W PRP16P15938 1071 aaPredicted RBP3.45□□□□□ -1.86
LCB5YLR260W SEN2P16658 377 aa3.45□□□□□ -1.86
LCB5YLR260W SAG1P20840 650 aa3.45□□□□□ -1.86
LCB5YLR260W MEK1P24719 497 aaPredicted RBP3.45□□□□□ -1.86
LCB5YLR260W ADY2P25613 283 aa3.45□□□□□ -1.86
LCB5YLR260W MVD1P32377 396 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W SSE2P32590 693 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W YKR073CP36153 106 aa3.45□□□□□ -1.86
LCB5YLR260W ECM13P38195 257 aa3.45□□□□□ -1.86
LCB5YLR260W HEM14P40012 539 aa3.45□□□□□ -1.86
LCB5YLR260W YIL108WP40483 696 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W RSM25P40496 264 aa3.45□□□□□ -1.86
LCB5YLR260W GTS1P40956 396 aa3.45□□□□□ -1.86
LCB5YLR260W NMD5P46970 1048 aa3.45□□□□□ -1.86
LCB5YLR260W SSY5P47002 699 aa3.45□□□□□ -1.86
LCB5YLR260W TOM22P49334 152 aa3.45□□□□□ -1.86
LCB5YLR260W RAI1P53063 387 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W YPL014WQ02606 381 aa3.45□□□□□ -1.86
LCB5YLR260W SSY1Q03770 852 aa3.45□□□□□ -1.86
LCB5YLR260W RRP17Q04031 235 aaPredicted RBP3.45□□□□□ -1.86
LCB5YLR260W ATG23Q06671 453 aa3.45□□□□□ -1.86
LCB5YLR260W SIL1Q08199 421 aa3.45□□□□□ -1.86
LCB5YLR260W NDD1Q08887 554 aa3.45□□□□□ -1.86
LCB5YLR260W RKM1Q08961 583 aaPredicted RBP3.45□□□□□ -1.86
LCB5YLR260W RIO1Q12196 484 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W LAG2Q92325 660 aa3.45□□□□□ -1.86
LCB5YLR260W RPS3P05750 240 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W PYC1P11154 1178 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W GAL3P13045 520 aa3.45□□□□□ -1.86
LCB5YLR260W YPK2P18961 677 aa3.45□□□□□ -1.86
LCB5YLR260W FPR1P20081 114 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W AIM26P32858 118 aa3.45□□□□□ -1.86
LCB5YLR260W TUL1P36096 758 aa3.45□□□□□ -1.86
LCB5YLR260W ATG12P38316 186 aa3.45□□□□□ -1.86
LCB5YLR260W WSC4P38739 605 aa3.45□□□□□ -1.86
LCB5YLR260W PET100P38958 111 aa3.45□□□□□ -1.86
LCB5YLR260W PRM9P39551 298 aa3.45□□□□□ -1.86
LCB5YLR260W YNL195CP40168 261 aa3.45□□□□□ -1.86
LCB5YLR260W SEC24P40482 926 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W UFE1P41834 346 aa3.45□□□□□ -1.86
LCB5YLR260W MTR3P48240 250 aaPredicted RBP3.45□□□□□ -1.86
LCB5YLR260W IMD4P50094 524 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W YGL114WP53134 725 aa3.45□□□□□ -1.86
LCB5YLR260W YGR012WP53206 393 aa3.45□□□□□ -1.86
LCB5YLR260W BOP3P53958 396 aa3.45□□□□□ -1.86
LCB5YLR260W SDH1Q00711 640 aa3.45□□□□□ -1.86
LCB5YLR260W URH1Q04179 340 aa3.45□□□□□ -1.86
LCB5YLR260W BUD22Q04347 519 aaKnown RBP3.45□□□□□ -1.86
LCB5YLR260W TAF9Q05027 157 aa3.45□□□□□ -1.86
LCB5YLR260W FRE3Q08905 711 aa3.45□□□□□ -1.86
LCB5YLR260W ACC1Q00955 2233 aaKnown RBP3.44□□□□□ -1.86
LCB5YLR260W MSF1P08425 469 aa3.44□□□□□ -1.86
LCB5YLR260W SEC63P14906 663 aa3.44□□□□□ -1.86
LCB5YLR260W PDA1P16387 420 aaKnown RBP3.44□□□□□ -1.86
LCB5YLR260W SPO12P17123 173 aa3.44□□□□□ -1.86
LCB5YLR260W RVS161P25343 265 aaKnown RBP3.44□□□□□ -1.86
LCB5YLR260W TIF3P34167 436 aaKnown RBP3.44□□□□□ -1.86
LCB5YLR260W RRP1P35178 278 aaPredicted RBP3.44□□□□□ -1.86
LCB5YLR260W ZTA1P38230 334 aaKnown RBP3.44□□□□□ -1.86
LCB5YLR260W EHT1P38295 451 aa3.44□□□□□ -1.86
LCB5YLR260W SWC5P38326 303 aa3.44□□□□□ -1.86
LCB5YLR260W END3P39013 349 aa3.44□□□□□ -1.86
LCB5YLR260W CIN1P40987 1014 aa3.44□□□□□ -1.86
LCB5YLR260W BNA6P43619 295 aa3.44□□□□□ -1.86
LCB5YLR260W RIB4P50861 169 aaPredicted RBP3.44□□□□□ -1.86
LCB5YLR260W MIG2P53035 382 aa3.44□□□□□ -1.86
LCB5YLR260W DBP6P53734 629 aaKnown RBP3.44□□□□□ -1.86
LCB5YLR260W UBR1P19812 1950 aa3.44□□□□□ -1.86
LCB5YLR260W YBR085C-AO43137 85 aa3.43□□□□□ -1.86
LCB5YLR260W RPL40AP0CH08 128 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W RPL40BP0CH09 128 aaKnown RBP3.43□□□□□ -1.86
LCB5YLR260W URA4P20051 364 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms