RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W ARR1Q06596 294 aa14.59□□□□□ -0.07
CCC1YLR220W YLR036CQ07986 203 aa14.59□□□□□ -0.07
CCC1YLR220W TOR1P35169 2470 aa14.58□□□□□ -0.07
CCC1YLR220W CMK2P22517 447 aa14.58□□□□□ -0.08
CCC1YLR220W RPS27AP35997 82 aaKnown RBP14.58□□□□□ -0.08
CCC1YLR220W ATG14P38270 344 aa14.58□□□□□ -0.08
CCC1YLR220W UBS1P38290 277 aa14.58□□□□□ -0.08
CCC1YLR220W RPS27BP38711 82 aa14.58□□□□□ -0.08
CCC1YLR220W MTG2P38860 518 aa14.58□□□□□ -0.08
CCC1YLR220W RIC1P40395 1056 aa14.58□□□□□ -0.08
CCC1YLR220W UBC9P50623 157 aaPredicted RBP14.58□□□□□ -0.08
CCC1YLR220W COS6P53344 381 aa14.58□□□□□ -0.08
CCC1YLR220W ATP25Q03153 612 aa14.58□□□□□ -0.08
CCC1YLR220W HFD1Q04458 532 aa14.58□□□□□ -0.08
CCC1YLR220W ATG38Q05789 226 aaKnown RBP14.58□□□□□ -0.08
CCC1YLR220W THP1Q08231 455 aa14.58□□□□□ -0.08
CCC1YLR220W YTM1Q12024 460 aaPredicted RBP14.58□□□□□ -0.08
CCC1YLR220W YKL033W-AQ86ZR7 236 aa14.58□□□□□ -0.08
CCC1YLR220W TSL1P38427 1098 aaKnown RBP14.57□□□□□ -0.08
CCC1YLR220W QDR2P40474 542 aa14.57□□□□□ -0.08
CCC1YLR220W LYS12P40495 371 aaKnown RBP14.57□□□□□ -0.08
CCC1YLR220W ERP6P53198 216 aa14.57□□□□□ -0.08
CCC1YLR220W YNL095CP53932 642 aa14.57□□□□□ -0.08
CCC1YLR220W GPI11Q06636 219 aa14.57□□□□□ -0.08
CCC1YLR220W RAD7P06779 565 aa14.56□□□□□ -0.08
CCC1YLR220W PUT2P07275 575 aa14.56□□□□□ -0.08
CCC1YLR220W STE4P18851 423 aa14.56□□□□□ -0.08
CCC1YLR220W CMK1P27466 446 aaKnown RBP14.56□□□□□ -0.08
CCC1YLR220W KAP122P32767 1081 aa14.56□□□□□ -0.08
CCC1YLR220W DLD3P39976 496 aaKnown RBP14.56□□□□□ -0.08
CCC1YLR220W FAU1P40099 211 aa14.56□□□□□ -0.08
CCC1YLR220W STE24P47154 453 aa14.56□□□□□ -0.08
CCC1YLR220W TRM9P49957 279 aa14.56□□□□□ -0.08
CCC1YLR220W CDH1P53197 566 aa14.56□□□□□ -0.08
CCC1YLR220W PEX12Q04370 399 aa14.56□□□□□ -0.08
CCC1YLR220W YOL073CQ08232 322 aa14.56□□□□□ -0.08
CCC1YLR220W BSC1Q12140 328 aa14.56□□□□□ -0.08
CCC1YLR220W WTM1Q12363 437 aaKnown RBP14.56□□□□□ -0.08
CCC1YLR220W MHF2Q3E829 80 aa14.56□□□□□ -0.08
CCC1YLR220W MDM12Q92328 271 aa14.56□□□□□ -0.08
CCC1YLR220W RPS1BP23248 255 aaKnown RBP14.55□□□□□ -0.08
CCC1YLR220W MXR2P25566 168 aa14.55□□□□□ -0.08
CCC1YLR220W RIB1P38066 345 aa14.55□□□□□ -0.08
CCC1YLR220W YJL068CP40363 299 aa14.55□□□□□ -0.08
CCC1YLR220W ARF3P40994 183 aaRIP-Chip data14.55□□□□□ -0.08not detected
CCC1YLR220W ELP2P42935 788 aa14.55□□□□□ -0.08
CCC1YLR220W SPR6Q01684 191 aa14.55□□□□□ -0.08
CCC1YLR220W YOR019WQ99248 730 aa14.55□□□□□ -0.08
CCC1YLR220W MER1P16523 270 aa14.54□□□□□ -0.08
CCC1YLR220W RPB5P20434 215 aa14.54□□□□□ -0.08
CCC1YLR220W CLB3P24870 427 aa14.54□□□□□ -0.08
CCC1YLR220W PEX3P28795 441 aa14.54□□□□□ -0.08
CCC1YLR220W YEL020CP39994 560 aa14.54□□□□□ -0.08
CCC1YLR220W LAS21P40367 830 aa14.54□□□□□ -0.08
CCC1YLR220W ASK10P48361 1146 aa14.54□□□□□ -0.08
CCC1YLR220W HOS2P53096 452 aaPredicted RBP14.54□□□□□ -0.08
CCC1YLR220W RRT8Q08219 342 aa14.54□□□□□ -0.08
CCC1YLR220W PFK27Q12471 397 aaPredicted RBP14.54□□□□□ -0.08
CCC1YLR220W RIP1P08067 215 aa14.53□□□□□ -0.08
CCC1YLR220W MKK1P32490 508 aa14.53□□□□□ -0.08
CCC1YLR220W MSN2P33748 704 aa14.53□□□□□ -0.08
CCC1YLR220W SWH1P35845 1188 aa14.53□□□□□ -0.08
CCC1YLR220W RBG1P39729 369 aa14.53□□□□□ -0.08
CCC1YLR220W GIP2P40036 548 aa14.53□□□□□ -0.08
CCC1YLR220W FMP33P46998 180 aa14.53□□□□□ -0.08
CCC1YLR220W TOM22P49334 152 aa14.53□□□□□ -0.08
CCC1YLR220W YAK1P14680 807 aa14.52□□□□□ -0.09
CCC1YLR220W APN1P22936 367 aa14.52□□□□□ -0.09
CCC1YLR220W ARP2P32381 391 aaKnown RBP14.52□□□□□ -0.09
CCC1YLR220W RIM101P33400 625 aa14.52□□□□□ -0.09
CCC1YLR220W AST1P35183 429 aa14.52□□□□□ -0.09
CCC1YLR220W SNP1Q00916 300 aaPredicted RBP14.52□□□□□ -0.09
CCC1YLR220W RSF1Q05043 376 aa14.52□□□□□ -0.09
CCC1YLR220W FDH1Q08911 376 aa14.52□□□□□ -0.09
CCC1YLR220W CYR1P08678 2026 aaKnown RBP14.51□□□□□ -0.09
CCC1YLR220W HTS1P07263 546 aaKnown RBP14.51□□□□□ -0.09
CCC1YLR220W HOM3P10869 527 aa14.51□□□□□ -0.09
CCC1YLR220W DMC1P25453 334 aa14.51□□□□□ -0.09
CCC1YLR220W FAA1P30624 700 aaKnown RBP14.51□□□□□ -0.09
CCC1YLR220W MKK2P32491 506 aa14.51□□□□□ -0.09
CCC1YLR220W PTR2P32901 601 aa14.51□□□□□ -0.09
CCC1YLR220W ICE2P40499 491 aa14.51□□□□□ -0.09
CCC1YLR220W VHR1P40522 640 aa14.51□□□□□ -0.09
CCC1YLR220W MRPS18P42847 217 aa14.51□□□□□ -0.09
CCC1YLR220W AGP3P43548 558 aa14.51□□□□□ -0.09
CCC1YLR220W YGR016WP53209 190 aa14.51□□□□□ -0.09
CCC1YLR220W YGR079WP53249 370 aa14.51□□□□□ -0.09
CCC1YLR220W TRS23Q03784 219 aa14.51□□□□□ -0.09
CCC1YLR220W TPP1Q03796 238 aa14.51□□□□□ -0.09
CCC1YLR220W SPO77Q06134 477 aa14.51□□□□□ -0.09
CCC1YLR220W YDL199CQ12407 687 aa14.51□□□□□ -0.09
CCC1YLR220W FAS1P07149 2051 aaKnown RBP14.5□□□□□ -0.09
CCC1YLR220W ZWF1P11412 505 aaKnown RBP14.5□□□□□ -0.09
CCC1YLR220W AAC3P18238 307 aa14.5□□□□□ -0.09
CCC1YLR220W YJU2P28320 278 aaPredicted RBP14.5□□□□□ -0.09
CCC1YLR220W LHP1P33399 275 aaKnown RBP14.5□□□□□ -0.09
CCC1YLR220W AUR1P36107 401 aaPredicted RBP14.5□□□□□ -0.09
CCC1YLR220W YHL012WP38709 493 aa14.5□□□□□ -0.09
CCC1YLR220W YHR210CP38893 341 aa14.5□□□□□ -0.09
CCC1YLR220W FMP52P40008 231 aa14.5□□□□□ -0.09
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms