RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	FUS3	P16892	353 aa	Known RBP	4.16	□□□□□ -1.74
TFA1	YKL028W	RPI1	P23250	407 aa	Known RBP	4.16	□□□□□ -1.74
TFA1	YKL028W	CLB2	P24869	491 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	ATP11	P32453	318 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	HXT1	P32465	570 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	RGT1	P32862	1170 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	MSN2	P33748	704 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	YKL023W	P36103	277 aa	Known RBP	4.16	□□□□□ -1.74
TFA1	YKL028W	IML3	P38265	245 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	STP2	P38704	541 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	RTT107	P38850	1070 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	YRB2	P40517	327 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	SNL1	P40548	159 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	SAS2	P40963	338 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	STE24	P47154	453 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	YDL186W	P48568	277 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	PYK2	P52489	506 aa	Known RBP	4.16	□□□□□ -1.74
TFA1	YKL028W	DRN1	P53255	507 aa	Known RBP	4.16	□□□□□ -1.74
TFA1	YKL028W	YTP1	P53584	459 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	YMR087W	Q04299	284 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	RTN1	Q04947	295 aa	Known RBP	4.16	□□□□□ -1.74
TFA1	YKL028W	RAD34	Q06665	692 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	YOL073C	Q08232	322 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	AIM45	Q12480	344 aa	Known RBP	4.16	□□□□□ -1.74
TFA1	YKL028W	RRP12	Q12754	1228 aa	Known RBP	4.16	□□□□□ -1.74
TFA1	YKL028W	RTC1	Q08281	1341 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	CHS1	P08004	1131 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	RPL18A	P0CX49	186 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	RPL18B	P0CX50	186 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	RVS161	P25343	265 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	YCR016W	P25617	290 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	GSY2	P27472	705 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	ICL1	P28240	557 aa	Predicted RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	MSK1	P32048	576 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	PRO3	P32263	286 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	RME1	P32338	300 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	CYS4	P32582	507 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	IMP3	P32899	183 aa	Predicted RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	ECM4	P36156	370 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	EFM5	P53200	248 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	SNU56	Q03782	492 aa	Known RBP	4.15	□□□□□ -1.74
TFA1	YKL028W	HSP31	Q04432	237 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	TMN2	Q04562	672 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	ATG26	Q06321	1198 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	CTS2	Q06350	511 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	THI3	Q07471	609 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	BSC6	Q08280	497 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	AFT2	Q08957	416 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	BTS1	Q12051	335 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	SUT2	Q12286	268 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	GLE1	Q12315	538 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	RNH203	Q12338	110 aa		4.15	□□□□□ -1.74
TFA1	YKL028W	TYR1	P20049	452 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	ACH1	P32316	526 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	CYM1	P32898	989 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	YMR262W	P38430	313 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	UBA4	P38820	440 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	FET3	P38993	636 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	ARG2	P40360	574 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	SYG1	P40528	902 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	YIR014W	P40570	242 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	YFL015C	P43578	164 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	FMP33	P46998	180 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	LYS20	P48570	428 aa	Known RBP	4.14	□□□□□ -1.75
TFA1	YKL028W	RET3	P53600	189 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	DUG3	P53871	357 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	LGE1	Q02796	332 aa	Known RBP	4.14	□□□□□ -1.75
TFA1	YKL028W	MRP51	Q02950	344 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	NUP53	Q03790	475 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	SHS1	Q07657	551 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	DNL4	Q08387	944 aa	Predicted RBP	4.14	□□□□□ -1.75
TFA1	YKL028W	YLR049C	Q12110	428 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	APC2	Q12440	853 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	YOS9	Q99220	542 aa		4.14	□□□□□ -1.75
TFA1	YKL028W	YPT1	P01123	206 aa	Known RBP	4.13	□□□□□ -1.75
TFA1	YKL028W	RAD52	P06778	471 aa	Known RBP	4.13	□□□□□ -1.75
TFA1	YKL028W	GDH1	P07262	454 aa	Known RBP	4.13	□□□□□ -1.75
TFA1	YKL028W	YLL053C	P0CD98	152 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	POL30	P15873	258 aa	Known RBP	4.13	□□□□□ -1.75
TFA1	YKL028W	DAL81	P21657	970 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	DBR1	P24309	405 aa	Known RBP	4.13	□□□□□ -1.75
TFA1	YKL028W	ERG4	P25340	473 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	CIN8	P27895	1000 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	FUN19	P28003	413 aa	Predicted RBP	4.13	□□□□□ -1.75
TFA1	YKL028W	CUE2	P36075	443 aa	Known RBP	4.13	□□□□□ -1.75
TFA1	YKL028W	STV1	P37296	890 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	SUL1	P38359	859 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	YMR134W	P40207	237 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	CDC1	P40986	491 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	POP1	P41812	875 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	TDA10	P42938	290 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	YGR117C	P53270	476 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	COX20	Q04935	205 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	FRE7	Q12333	620 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	ATG31	Q12421	196 aa		4.13	□□□□□ -1.75
TFA1	YKL028W	RPL12A	P0CX53	165 aa	Known RBP	4.12	□□□□□ -1.75
TFA1	YKL028W	RPL12B	P0CX54	165 aa		4.12	□□□□□ -1.75
TFA1	YKL028W	SNF3	P10870	884 aa		4.12	□□□□□ -1.75
TFA1	YKL028W	GPI12	P23797	304 aa		4.12	□□□□□ -1.75
TFA1	YKL028W	RPL5	P26321	297 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms