RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeast

Gene PRP38, Length 729 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP38	YGR075C	BEM1	P29366	551 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	SPT10	P35208	640 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	APE3	P37302	537 aa	Known RBP	2.69	□□□□□ -1.98
PRP38	YGR075C	GPD2	P41911	440 aa	Known RBP	2.69	□□□□□ -1.98
PRP38	YGR075C	RPS0B	P46654	252 aa	Known RBP	2.69	□□□□□ -1.98
PRP38	YGR075C	SFH5	P47008	294 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	MNP1	P53163	194 aa	Predicted RBP	2.69	□□□□□ -1.98
PRP38	YGR075C	MTQ1	P53944	314 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	NUP116	Q02630	1113 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	OAZ1	Q02803	292 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	YMR155W	Q03795	547 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	SRL2	Q12020	392 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	JID1	Q12350	301 aa		2.69	□□□□□ -1.98
PRP38	YGR075C	PDX1	P16451	410 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	RHB1	P25378	209 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	SMY1	P32364	656 aa	Known RBP	2.68	□□□□□ -1.98
PRP38	YGR075C	SAS3	P34218	831 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	SOR1	P35497	357 aa	Known RBP	2.68	□□□□□ -1.98
PRP38	YGR075C	SBE22	P38814	852 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	SEO1	P39709	593 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	YAL037W	P39728	267 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	YER186C	P40101	306 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	FMS1	P50264	508 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	ADA2	Q02336	434 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	TAF12	Q03761	539 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	YDR131C	Q03899	556 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	SOR2	Q07786	357 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	RKM1	Q08961	583 aa	Predicted RBP	2.68	□□□□□ -1.98
PRP38	YGR075C	ERP4	Q12450	207 aa		2.68	□□□□□ -1.98
PRP38	YGR075C	CLC1	P17891	233 aa		2.67	□□□□□ -1.98
PRP38	YGR075C	SPO7	P18410	259 aa		2.67	□□□□□ -1.98
PRP38	YGR075C	AAT2	P23542	418 aa	Known RBP	2.67	□□□□□ -1.98
PRP38	YGR075C	BAT1	P38891	393 aa	Known RBP	2.67	□□□□□ -1.98
PRP38	YGR075C	DLD2	P46681	530 aa	Known RBP	2.67	□□□□□ -1.98
PRP38	YGR075C	GIP3	Q03016	1276 aa		2.67	□□□□□ -1.98
PRP38	YGR075C	RIF2	Q06208	395 aa		2.67	□□□□□ -1.98
PRP38	YGR075C	NDE2	Q07500	545 aa		2.67	□□□□□ -1.98
PRP38	YGR075C	SMF3	Q12078	473 aa	Predicted RBP	2.67	□□□□□ -1.98
PRP38	YGR075C	VAM3	Q12241	283 aa		2.67	□□□□□ -1.98
PRP38	YGR075C	SNU66	Q12420	587 aa	Predicted RBP	2.67	□□□□□ -1.98
PRP38	YGR075C	MSI1	P13712	422 aa		2.66	□□□□□ -1.98
PRP38	YGR075C	CLN1	P20437	546 aa		2.66	□□□□□ -1.98
PRP38	YGR075C	ADK2	P26364	225 aa		2.66	□□□□□ -1.98
PRP38	YGR075C	YIL029C	P40538	142 aa		2.66	□□□□□ -1.98
PRP38	YGR075C	VHS1	Q03785	461 aa		2.66	□□□□□ -1.98
PRP38	YGR075C	LIP2	Q06005	328 aa		2.66	□□□□□ -1.98
PRP38	YGR075C	YRF1-4	O13559	1382 aa		2.65	□□□□□ -1.98
PRP38	YGR075C	PSK1	P31374	1356 aa		2.65	□□□□□ -1.98
PRP38	YGR075C	SCEI	P03882	235 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	CHK1	P38147	527 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	SIM1	P40472	476 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	PHO86	P46956	311 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	BIR1	P47134	954 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	ARX1	Q03862	593 aa	Known RBP	2.65	□□□□□ -1.99
PRP38	YGR075C	IES4	Q08561	116 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	RAX1	Q08760	435 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	YPQ1	Q12010	308 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	ISN1	Q99312	450 aa		2.65	□□□□□ -1.99
PRP38	YGR075C	REC107	P21651	314 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	YCR051W	P25631	222 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	PHA2	P32452	334 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	VMA8	P32610	256 aa	Known RBP	2.64	□□□□□ -1.99
PRP38	YGR075C	MRPS9	P38120	278 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	OXA1	P39952	402 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	BNS1	P50084	137 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	YML6	P51998	286 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	BNI5	P53890	448 aa	Known RBP	2.64	□□□□□ -1.99
PRP38	YGR075C	MRPS16	Q02608	121 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	RMT2	Q03305	412 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	ERB1	Q04660	807 aa	Known RBP	2.64	□□□□□ -1.99
PRP38	YGR075C	RRP45	Q05636	305 aa	Known RBP	2.64	□□□□□ -1.99
PRP38	YGR075C	YLR345W	Q06137	509 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	DNL4	Q08387	944 aa	Predicted RBP	2.64	□□□□□ -1.99
PRP38	YGR075C	HSP42	Q12329	375 aa		2.64	□□□□□ -1.99
PRP38	YGR075C	COX4	P04037	155 aa		2.63	□□□□□ -1.99
PRP38	YGR075C	YCL068C	P25593	260 aa		2.63	□□□□□ -1.99
PRP38	YGR075C	URA7	P28274	579 aa	Known RBP	2.63	□□□□□ -1.99
PRP38	YGR075C	DBF4	P32325	704 aa		2.63	□□□□□ -1.99
PRP38	YGR075C	IES6	P32617	166 aa		2.63	□□□□□ -1.99
PRP38	YGR075C	COX14	P39103	70 aa		2.63	□□□□□ -1.99
PRP38	YGR075C	PGU1	P47180	361 aa		2.63	□□□□□ -1.99
PRP38	YGR075C	MRM2	P53123	320 aa		2.63	□□□□□ -1.99
PRP38	YGR075C	ROY1	Q04847	553 aa		2.63	□□□□□ -1.99
PRP38	YGR075C	YGK3	Q12222	375 aa	Predicted RBP	2.63	□□□□□ -1.99
PRP38	YGR075C	TPT1	Q12272	230 aa	Known RBP	2.63	□□□□□ -1.99
PRP38	YGR075C	KOG1	P38873	1557 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	PRB1	P09232	635 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	RPB5	P20434	215 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	CLB1	P24868	471 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	YME2	P32843	850 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	YKL097C	P34245	136 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	RRP1	P35178	278 aa	Predicted RBP	2.62	□□□□□ -1.99
PRP38	YGR075C	SRP72	P38688	640 aa	Known RBP	2.62	□□□□□ -1.99
PRP38	YGR075C	RRP4	P38792	359 aa	Known RBP	2.62	□□□□□ -1.99
PRP38	YGR075C	PTI1	P39927	425 aa	Predicted RBP	2.62	□□□□□ -1.99
PRP38	YGR075C	EGT2	P42835	1041 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	ATG18	P43601	500 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	YFR057W	P43625	151 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	COS5	P47187	383 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	RSC1	P53236	928 aa		2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms