RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W JEM1P40358 645 aa3.47□□□□□ -1.85
PRP18YGR006W YIL067CP40514 678 aa3.47□□□□□ -1.85
PRP18YGR006W LCB2P40970 561 aa3.47□□□□□ -1.85
PRP18YGR006W BRO1P48582 844 aa3.47□□□□□ -1.85
PRP18YGR006W PBA1Q05778 276 aa3.47□□□□□ -1.85
PRP18YGR006W SRL2Q12020 392 aa3.47□□□□□ -1.85
PRP18YGR006W PAR32Q12515 295 aaKnown RBP3.47□□□□□ -1.85
PRP18YGR006W HSP82P02829 709 aaKnown RBP3.46□□□□□ -1.86
PRP18YGR006W PDE2P06776 526 aa3.46□□□□□ -1.86
PRP18YGR006W CYS4P32582 507 aaKnown RBP3.46□□□□□ -1.86
PRP18YGR006W MUD1P32605 298 aaKnown RBP3.46□□□□□ -1.86
PRP18YGR006W RGT1P32862 1170 aa3.46□□□□□ -1.86
PRP18YGR006W YPI1P43587 155 aa3.46□□□□□ -1.86
PRP18YGR006W NCA3P46955 337 aa3.46□□□□□ -1.86
PRP18YGR006W AZR1P50080 613 aa3.46□□□□□ -1.86
PRP18YGR006W YGL242CP53066 181 aa3.46□□□□□ -1.86
PRP18YGR006W PIB2P53191 635 aa3.46□□□□□ -1.86
PRP18YGR006W HXT11P54862 567 aa3.46□□□□□ -1.86
PRP18YGR006W MMT1Q03218 510 aa3.46□□□□□ -1.86
PRP18YGR006W HER2Q03557 464 aa3.46□□□□□ -1.86
PRP18YGR006W RCF1Q03713 159 aa3.46□□□□□ -1.86
PRP18YGR006W SMA2Q04658 369 aa3.46□□□□□ -1.86
PRP18YGR006W YDR341CQ05506 607 aaKnown RBP3.46□□□□□ -1.86
PRP18YGR006W RRP9Q06506 573 aaKnown RBP3.46□□□□□ -1.86
PRP18YGR006W TLG2Q08144 397 aa3.46□□□□□ -1.86
PRP18YGR006W RPN5Q12250 445 aaKnown RBP3.46□□□□□ -1.86
PRP18YGR006W ERV2Q12284 196 aa3.46□□□□□ -1.86
PRP18YGR006W SUP35P05453 685 aaKnown RBP3.45□□□□□ -1.86
PRP18YGR006W IMA3P0CW40 589 aa3.45□□□□□ -1.86
PRP18YGR006W IMA4P0CW41 589 aa3.45□□□□□ -1.86
PRP18YGR006W ARO2P28777 376 aaKnown RBP3.45□□□□□ -1.86
PRP18YGR006W AVT5P38176 459 aa3.45□□□□□ -1.86
PRP18YGR006W NDT80P38830 627 aa3.45□□□□□ -1.86
PRP18YGR006W STN1P38960 494 aa3.45□□□□□ -1.86
PRP18YGR006W PRM5P40476 318 aa3.45□□□□□ -1.86
PRP18YGR006W SFH5P47008 294 aa3.45□□□□□ -1.86
PRP18YGR006W TOF1P53840 1238 aa3.45□□□□□ -1.86
PRP18YGR006W STD1Q02794 444 aa3.45□□□□□ -1.86
PRP18YGR006W ELP3Q02908 557 aaKnown RBP3.45□□□□□ -1.86
PRP18YGR006W SCW10Q04951 389 aa3.45□□□□□ -1.86
PRP18YGR006W BCH1Q05029 724 aa3.45□□□□□ -1.86
PRP18YGR006W TSR1Q07381 788 aaKnown RBP3.45□□□□□ -1.86
PRP18YGR006W IMA2Q08295 589 aa3.45□□□□□ -1.86
PRP18YGR006W TPT1Q12272 230 aaKnown RBP3.45□□□□□ -1.86
PRP18YGR006W CDC21P06785 304 aa3.44□□□□□ -1.86
PRP18YGR006W RPL1AP0CX43 217 aaKnown RBP3.44□□□□□ -1.86
PRP18YGR006W RPL1BP0CX44 217 aaKnown RBP3.44□□□□□ -1.86
PRP18YGR006W ATP3P38077 311 aaKnown RBP3.44□□□□□ -1.86
PRP18YGR006W EFM4P40516 257 aa3.44□□□□□ -1.86
PRP18YGR006W SNT309Q06091 175 aaPredicted RBP3.44□□□□□ -1.86
PRP18YGR006W NSE1Q07913 336 aa3.44□□□□□ -1.86
PRP18YGR006W YOR387CQ08910 206 aa3.44□□□□□ -1.86
PRP18YGR006W CEX1Q12453 761 aa3.44□□□□□ -1.86
PRP18YGR006W DST1P07273 309 aa3.43□□□□□ -1.86
PRP18YGR006W ALG1P16661 449 aa3.43□□□□□ -1.86
PRP18YGR006W RRP1P35178 278 aaPredicted RBP3.43□□□□□ -1.86
PRP18YGR006W YBR139WP38109 508 aa3.43□□□□□ -1.86
PRP18YGR006W YBR137WP38276 179 aa3.43□□□□□ -1.86
PRP18YGR006W INM1P38710 295 aa3.43□□□□□ -1.86
PRP18YGR006W PTH1P38876 190 aaKnown RBP3.43□□□□□ -1.86
PRP18YGR006W YER079WP40052 210 aaKnown RBP3.43□□□□□ -1.86
PRP18YGR006W SEC28P40509 296 aaKnown RBP3.43□□□□□ -1.86
PRP18YGR006W BTN2P53286 410 aa3.43□□□□□ -1.86
PRP18YGR006W RHO5P53879 331 aaKnown RBP3.43□□□□□ -1.86
PRP18YGR006W ERO1Q03103 563 aa3.43□□□□□ -1.86
PRP18YGR006W NDE2Q07500 545 aa3.43□□□□□ -1.86
PRP18YGR006W SNU66Q12420 587 aaPredicted RBP3.43□□□□□ -1.86
PRP18YGR006W PHO91P27514 894 aa3.42□□□□□ -1.86
PRP18YGR006W PUP2P32379 260 aa3.42□□□□□ -1.86
PRP18YGR006W REE1P40893 198 aa3.42□□□□□ -1.86
PRP18YGR006W YGR210CP42942 411 aa3.42□□□□□ -1.86
PRP18YGR006W YDR541CQ03049 344 aa3.42□□□□□ -1.86
PRP18YGR006W NDL1Q06568 189 aa3.42□□□□□ -1.86
PRP18YGR006W YCL068CP25593 260 aa3.41□□□□□ -1.86
PRP18YGR006W NAM9P27929 486 aa3.41□□□□□ -1.86
PRP18YGR006W TOA1P32773 286 aa3.41□□□□□ -1.86
PRP18YGR006W BLI1P35727 113 aa3.41□□□□□ -1.86
PRP18YGR006W CHK1P38147 527 aa3.41□□□□□ -1.86
PRP18YGR006W JLP2P40206 208 aa3.41□□□□□ -1.86
PRP18YGR006W PEX25Q02969 394 aa3.41□□□□□ -1.86
PRP18YGR006W RAX1Q08760 435 aa3.41□□□□□ -1.86
PRP18YGR006W RSA1Q08932 381 aa3.41□□□□□ -1.86
PRP18YGR006W HIF1Q12373 385 aa3.41□□□□□ -1.86
PRP18YGR006W TRP1P00912 224 aa3.4□□□□□ -1.87
PRP18YGR006W DAL2P25335 343 aa3.4□□□□□ -1.87
PRP18YGR006W RRP7P25368 297 aaPredicted RBP3.4□□□□□ -1.87
PRP18YGR006W NRP1P32770 719 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
PRP18YGR006W MNS1P32906 549 aa3.4□□□□□ -1.87
PRP18YGR006W RFS1P38234 210 aaKnown RBP3.4□□□□□ -1.87
PRP18YGR006W GDT1P38301 280 aaPredicted RBP3.4□□□□□ -1.87
PRP18YGR006W GPI16P38875 610 aa3.4□□□□□ -1.87
PRP18YGR006W MMF1P40185 145 aaKnown RBP3.4□□□□□ -1.87
PRP18YGR006W PAC11P40960 533 aa3.4□□□□□ -1.87
PRP18YGR006W SPG5P42933 373 aa3.4□□□□□ -1.87
PRP18YGR006W ROG1P53118 685 aa3.4□□□□□ -1.87
PRP18YGR006W MTM1P53320 366 aa3.4□□□□□ -1.87
PRP18YGR006W CWC25P53854 179 aaKnown RBP3.4□□□□□ -1.87
PRP18YGR006W CCE1Q03702 353 aa3.4□□□□□ -1.87
PRP18YGR006W HRI1Q05905 244 aaKnown RBP3.4□□□□□ -1.87
PRP18YGR006W NCA2Q12374 616 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 114.6 ms